CX295844

Overview
NameCX295844
Unique NameCX295844
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295844 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 3.366e-76
Identity = 148/207 (71.50%), Postives = 165/207 (79.71%), Query Frame = 3
Query:   81 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGN 701
            +AFG   DSFS  S KAY+AEFI+TLLFVFAGVGSAIA+ ++T   ALDP+GLVAIAI H  ALFV V++ ANISGGH+NPAVTFGLA+GG ITILTG+FYW+AQLLG+ VA  LL  VT G A+PTH                  TF LVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVA+G+
Sbjct:    4 LAFGSVGDSFSATSIKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATVACLLLGFVTHGKAIPTH-AVAGISELEGVVFEVVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGD 209          
BLAST of CX295844 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.374e-68
Identity = 135/205 (65.85%), Postives = 150/205 (73.17%), Query Frame = 3
Query:   81 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAS 695
            IA GR D++    + KA LAEFISTL+FV AG GS +AFNK+T + A  PSGLVA A+ H F LFVAV++GANISGGHVNPAVTFG  +GG IT+L GI YWIAQLLGS+VA  +LK  TGGLAVP                    TFGLVYTVYATA DPK GSLGTIAPIAIGFIVGANILA G FSG SMNPA +FGPAV S
Sbjct:    6 IAIGRPDEATRPDALKAALAEFISTLIFVVAGSGSGMAFNKLTENGATTPSGLVAAAVAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILKFATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVS 210          
BLAST of CX295844 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 250.751 bits (639), Expect = 5.387e-66
Identity = 133/209 (63.64%), Postives = 148/209 (70.81%), Query Frame = 3
Query:   72 TMAIAFGRFDDS-FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAS 695
            T  IA G   +  +   + +A LAEFISTL+FVFAG GS IAFNK+T + A  PSGLVA A+ H F LFVAV++GANISGGHVNPAVTFG+ LGG IT+L GI YWIAQLLGS+ A FLL   TGG  +P                    TFGLVYTVYATA DPK GSLGTIAPIAIGFIVGANILA G FSG SMNPA +FGPAV S
Sbjct:    3 TRNIAIGGVQEEVYHPNALRAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLLSFATGGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVS 211          
BLAST of CX295844 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 7.778e-65
Identity = 130/205 (63.41%), Postives = 147/205 (71.71%), Query Frame = 3
Query:   81 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAS 695
            IA G   + +  G+ KA LAEFISTL+FVFAG GS +AF+K+T   A  P+GL+A A+ H FALFVAV++GANISGGHVNPAVTFG  +GG IT+  G+ YWIAQLLGS VA FLL+  TGGLA  T                   TFGLVYTVYATA DPKKGSLGTIAPIAIGFIVGANIL  G F G SMNPA SFGPA+ S
Sbjct:    6 IAVGSHQEVYHPGALKAALAEFISTLIFVFAGQGSGMAFSKLTGGGATTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRFSTGGLATGTFG-LTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVS 209          
BLAST of CX295844 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.268e-63
Identity = 126/205 (61.46%), Postives = 144/205 (70.24%), Query Frame = 3
Query:   81 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAS 695
            IA G   + +  G+ KA  AEFISTL+FVFAG GS +AF+K+T      P+GL+A A+ H FALFVAV++GANISGGHVNPAVTFG  +GG IT+  G+ YW+AQLLGS VA FLL+  TGG A  T                   TFGLVYTVYATA DPKKGSLGTIAPIAIGFIVGANIL  G F G SMNPA SFGPA+ S
Sbjct:    6 IALGSHQEVYHPGALKAAFAEFISTLIFVFAGQGSGMAFSKLTGGGPTTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVACFLLRFSTGGQATGTFG-LTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVS 209          
BLAST of CX295844 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.793e-61
Identity = 119/191 (62.30%), Postives = 140/191 (73.30%), Query Frame = 3
Query:  126 KAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG 698
            KA +AEFISTL+FVFAG GS +AF+K+T   A  P+GL+A ++ H  ALFVAV++GANISGGHVNPAVTFG  +GG I++L  + YW+AQLLGS+VA  LLK+ TGG A+   +                 TFGLVYTVYATA DPKKG LG IAPIAIGFIVGANILA G F G SMNPA SFGPAV +G
Sbjct:   21 KAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIATGGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG 211          
BLAST of CX295844 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 3.995e-61
Identity = 119/191 (62.30%), Postives = 138/191 (72.25%), Query Frame = 3
Query:  126 KAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG 698
            KA +AEFIS L+FVFAG GS +AF+K+T      PSGL+A ++ H  ALFVAVA+GANISGGHVNPAVTFG  +GG I+++  + YW+AQLLGS+VA  LLK+ TGG AV   +                 TFGLVYTVYATA DPKKG LG IAPIAIGFIVGANILA G F G SMNPA SFGPAV +G
Sbjct:   21 KAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG 211          
BLAST of CX295844 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.162e-60
Identity = 127/205 (61.95%), Postives = 145/205 (70.73%), Query Frame = 3
Query:   81 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAS 695
            IA G   ++    + KA LAEFIST +FVFAG GS IA+NK+T D A  P+GL++ +I H FALFVAV++GANISGGHVNPAVTFG  +GG IT+L GI Y IAQLLGSIVAS LL  VT   +VP                    TFGLVYTVYATA DPKKG++G IAPIAIGFIVGANIL  G F+G SMNPA SFGPAV S
Sbjct:    6 IAVGTPQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTAS-SVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVS 209          
BLAST of CX295844 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.378e-59
Identity = 116/205 (56.59%), Postives = 139/205 (67.80%), Query Frame = 3
Query:   81 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAS 695
            IA G   ++    + +A  AEF S ++FVFAG GS +A+ K+T D    P+GLVA ++ H FALFVAV++GAN+SGGHVNPAVTFG  +GG IT+L  I YWIAQLLG++VA  LLKV TGG+     +                 TFGLVYTVYATA DPKKG +G IAP+AIG IVGANIL  G F G SMNPA SFGPAV S
Sbjct:    6 IAIGTPGEASRPDAIRAAFAEFFSMVIFVFAGQGSGMAYGKLTGDGPATPAGLVAASLSHAFALFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGGMETAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVVS 210          
BLAST of CX295844 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 3.165e-58
Identity = 125/205 (60.98%), Postives = 143/205 (69.76%), Query Frame = 3
Query:   81 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAS 695
            IA G   ++    + KA LAEFIST +FVFAG GS IA+NK+T D A  P+GL++ +I H FALFVAV++GANISGGHVNPAV FG  +GG IT+L GI Y IAQLLGSIV S LL  VT   +VP                    TFGLVYTVYATA DPKKG++G IAPIAIGFIVGANIL  G F+G SMNPA SFGPAV S
Sbjct:    6 IAVGTPQEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLVFVTAS-SVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVS 208          
The following BLAST results are available for this feature:
BLAST of CX295844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
TIP21_MAIZE3.366e-7671.50Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
TIP11_ARATH3.374e-6865.85Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
TIP12_ARATH5.387e-6663.64Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]
TIP11_ORYSJ7.778e-6563.41Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
TIP11_MAIZE4.268e-6361.46Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1[more]
TIP12_MAIZE1.793e-6162.30Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
TIP12_ORYSJ3.995e-6162.30Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
TIP1_MEDTR1.162e-6061.95Probable aquaporin TIP-type OS=Medicago truncatula... [more]
TIP13_ARATH6.378e-5956.59Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
TIP1_MEDSA3.165e-5860.98Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]

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Properties
Property NameValue
Genbank descriptionC05076E03SK DroRLeaf1 Citrus clementina cDNA clone C05076E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295844 ID=CX295844; Name=CX295844; organism=Citrus clementina; type=EST; length=703bp
ATCTTCTTCTTCTTCTTAAGAAAGACTCGAGAGAGTTTTTTTTCCCCTAT
TCTCTAGCTCTTTCTTGATCAACAATGGCTATTGCCTTCGGCCGCTTCGA
TGATTCTTTCAGCTTAGGCTCCTTCAAGGCCTATCTTGCTGAGTTTATCT
CAACTTTGCTCTTTGTTTTCGCCGGCGTTGGCTCGGCCATTGCTTTCAAC
AAGATGACAGCAGATGCAGCACTTGATCCATCAGGGCTAGTAGCCATCGC
TATTTGCCATGGATTTGCTCTATTTGTCGCAGTTGCAATTGGTGCTAACA
TCTCAGGTGGCCACGTCAACCCAGCCGTCACCTTTGGATTGGCTCTTGGT
GGCCAAATCACCATCCTCACTGGCATCTTCTACTGGATTGCCCAACTTCT
TGGCTCTATTGTTGCCAGCTTCCTCCTCAAAGTTGTCACTGGAGGCTTGG
CAGTTCCTACCCACAATGTTGCTGCTGGAGTTGGAGCCATTGAAGGAGTT
GTGATGGAGATCATCATCACATTTGGTTTGGTCTACACGGTCTATGCCAC
GGCAGCTGACCCCAAGAAGGGATCATTGGGCACCATTGCACCCATTGCCA
TTGGTTTCATTGTCGGTGCCAACATCCTGGCCGCCGGCCCATTCTCCGGT
GGTTCCATGAACCCGGCCCGTTCCTTCGGGCCTGCCGTTGCCAGCGGCAA
CTT
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