CX295844

Overview
NameCX295844
Unique NameCX295844
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295844 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.347e-53
Identity = 107/209 (51.20%), Postives = 137/209 (65.55%), Query Frame = 3
Query:   78 AIAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALD-----PSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV 689
            A  FGR D++    S +A LAEF+ST +FVFA  GS ++ +K+  + A       P GL+ +A+ H FALF AV+   N+SGGHVNPAVTFG  +GG++T +  I+YWIAQLLG+I+A  LL++ T G+                       TFGLVY VY+T  DPK+GSLG IAP+AIG IVGANIL  GPFSG SMNPAR+FGPA+
Sbjct:    8 AYGFGRADEATHPDSIRATLAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFALFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPVGFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGSLGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPAL 216          
BLAST of CX295844 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.066e-53
Identity = 106/209 (50.72%), Postives = 137/209 (65.55%), Query Frame = 3
Query:   78 AIAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALD-----PSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV 689
            A  FGR D++    S +A LAEF+ST +FVFAG GS +A +K+  D A       P GLV +A+ H  ALF AV+   N+SGGHVNPAVTF   +GG+I+++  I+YW+AQL+G+I+A  LL++ T GL     +                 TF LVY VY+TA DPK+GS+G IAP+AIG IVGANIL  GPF G SMNPAR+FGPA+
Sbjct:    8 AYGFGRADEATHPDSIRATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGSIGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPAL 216          
BLAST of CX295844 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.390e-52
Identity = 97/200 (48.50%), Postives = 137/200 (68.50%), Query Frame = 3
Query:   90 GRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV 689
            GR +D+    + +A ++EF++T +FVFA  GS ++  K+  D +  P GLVA+++ H  AL VAVA+  NISGGHVNPA+TFG  LGG+++++  +FYW+AQLLG++VA+ LL++ TGG+  P                    TFGL+Y  YAT  DPK+G +GTIAP+A+GF++GAN+LA GPF G  MNPAR FGPA+
Sbjct:   15 GRSEDATHPDTIRAAISEFLATAIFVFAAEGSILSLGKLYQDMST-PGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGMRPPGFALASGVGDWHAVLLEATMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPAL 213          
BLAST of CX295844 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.782e-52
Identity = 101/207 (48.79%), Postives = 138/207 (66.67%), Query Frame = 3
Query:   69 STMAIAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV 689
            +T   +FGR D++    S +A LAEF ST +FVFAG GS +A  K+  D+A     L+A+A+ H FALF AV+   ++SGGHVNPAV+FG  +GG+I+++  ++YWIAQLLGSIVA+ +L++VT  +     +                 TFGL+YTVY TA DPK+G++  IAP+AIG IVGANIL  GPF G  MNPA +FGP++
Sbjct:    2 ATRRYSFGRTDEATHPDSMRASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTNNMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGAVSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSL 208          
BLAST of CX295844 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.870e-51
Identity = 97/200 (48.50%), Postives = 134/200 (67.00%), Query Frame = 3
Query:   90 GRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV 689
            GR +D+    + +A ++EFI+T +FVFA  GS ++  KM  D +    GLVA+A+ H  AL VAVA+  NISGGHVNPAVTFG  +GG+++++  + YW+AQLLG++ A+ LL++ TGG+  P                    TFGL+Y  YAT  DPK+G +GTIAP+A+GF++GAN+LA GPF G  MNPAR FGPA+
Sbjct:   14 GRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHDMST-AGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRLATGGMRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPAL 212          
BLAST of CX295844 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.068e-50
Identity = 96/202 (47.52%), Postives = 130/202 (64.36%), Query Frame = 3
Query:   90 GRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAAL--DPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAV 689
            GR +D+    + +A ++EFI+T +FVFA  GS ++  KM  D +      GLVA+A+ H   L VAVA+  N+SGGHVNPAVTFG  +GG+++++  + YW AQLLG++ A+ LL++ TGG   P                    TFG VY  YAT  DPK+G LGTIAP+A+GF++GAN+LA GPF G  MNPAR FGPA+
Sbjct:   16 GRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKRGHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPAL 217          
BLAST of CX295844 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.056e-49
Identity = 102/207 (49.28%), Postives = 127/207 (61.35%), Query Frame = 3
Query:   81 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGN 701
            I  G   ++      KA + EFI+T LFVFAGVGSA+A + +  +  +   GL A+A+ H F + V ++ G +ISGGH+NPAVT GL LGG I++     YWI QLL S  A FLL  +TGG+  P H                  TF L++TVYAT  DPKKGSL    P+  GF+VGANILA G FSG SMNPARSFGPA+ SGN
Sbjct:    4 IELGHHSEAAKPDCIKALIVEFITTFLFVFAGVGSAMATDSLVGNTLV---GLFAVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFLLSYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLTGFVVGANILAGGAFSGASMNPARSFGPALVSGN 206          
BLAST of CX295844 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3)

HSP 1 Score: 175.252 bits (443), Expect = 2.876e-43
Identity = 95/206 (46.12%), Postives = 121/206 (58.74%), Query Frame = 3
Query:  108 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLG--------TIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGN 701
            FS  + +AY AEF ST LFVF  VGS I+   +T D   D S L+A A+   F LF AV I A++SGGHVNPAVTF  A+GG IT+ + IFYW +Q+LGS  A  +L  ++ G AVPT                   TF +VYTV+  A DP+ G  G         +  + +G + GA +LAAG  +G SMNPARSFGPAV SG+
Sbjct:   12 FSPPALRAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAFGLFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRIAVEMTGFGAGILEGVLTFMVVYTVH-VAGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPARSFGPAVVSGH 216          
BLAST of CX295844 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 6.407e-43
Identity = 92/195 (47.18%), Postives = 119/195 (61.03%), Query Frame = 3
Query:  117 GSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGN 701
            G+ +A L+EF++T +FVFA  GS     KM  D      GL+ +A+ H  AL  AVA+  N SGGHVNPAVTFG+ +G +I+      YW AQLLG+++A  LL++ +GG+                       TFGLVYTVYATA D + G  G IAP+AIG + GANILA GPF G +MNPAR+FGPA+   N
Sbjct:   26 GATRAALSEFVATAVFVFAAEGSVYGLWKMYRDTGT-LGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRLASGGMRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGG-GDIAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALVGWN 218          
BLAST of CX295844 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.424e-42
Identity = 94/207 (45.41%), Postives = 125/207 (60.39%), Query Frame = 3
Query:   81 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGG-LAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASG 698
            +A G   ++   G  +A +AE + T LFVF+GVGSA+A  K+         GL A+A  H   + V V+ G ++SGGH+NPAVT GLA GG IT+     Y  AQLLGS +A  LL  +TGG  AVP H                  TF L++ VYAT  D ++ ++G + P+ +G +VGANILA GP+SG SMNPARSFGPA+A+G
Sbjct:    4 LALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKLGGGGDTI-MGLTAVAAAHALVVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAALTGGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVD-RRRAVGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPALAAG 208          
The following BLAST results are available for this feature:
BLAST of CX295844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
TIP31_ARATH2.347e-5351.20Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
TIP32_ARATH3.066e-5350.72Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP31_ORYSJ3.390e-5248.50Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
TIPA_PHAVU5.782e-5248.79Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]
TIP31_MAIZE2.870e-5148.50Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]
TIP32_MAIZE7.068e-5047.52Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
TIP41_ARATH2.056e-4949.28Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1... [more]
TIP51_ORYSJ2.876e-4346.12Probable aquaporin TIP5-1 OS=Oryza sativa subsp. j... [more]
TIP32_ORYSJ6.407e-4347.18Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]
TIP43_ORYSJ5.424e-4245.41Probable aquaporin TIP4-3 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionC05076E03SK DroRLeaf1 Citrus clementina cDNA clone C05076E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295844 ID=CX295844; Name=CX295844; organism=Citrus clementina; type=EST; length=703bp
ATCTTCTTCTTCTTCTTAAGAAAGACTCGAGAGAGTTTTTTTTCCCCTAT
TCTCTAGCTCTTTCTTGATCAACAATGGCTATTGCCTTCGGCCGCTTCGA
TGATTCTTTCAGCTTAGGCTCCTTCAAGGCCTATCTTGCTGAGTTTATCT
CAACTTTGCTCTTTGTTTTCGCCGGCGTTGGCTCGGCCATTGCTTTCAAC
AAGATGACAGCAGATGCAGCACTTGATCCATCAGGGCTAGTAGCCATCGC
TATTTGCCATGGATTTGCTCTATTTGTCGCAGTTGCAATTGGTGCTAACA
TCTCAGGTGGCCACGTCAACCCAGCCGTCACCTTTGGATTGGCTCTTGGT
GGCCAAATCACCATCCTCACTGGCATCTTCTACTGGATTGCCCAACTTCT
TGGCTCTATTGTTGCCAGCTTCCTCCTCAAAGTTGTCACTGGAGGCTTGG
CAGTTCCTACCCACAATGTTGCTGCTGGAGTTGGAGCCATTGAAGGAGTT
GTGATGGAGATCATCATCACATTTGGTTTGGTCTACACGGTCTATGCCAC
GGCAGCTGACCCCAAGAAGGGATCATTGGGCACCATTGCACCCATTGCCA
TTGGTTTCATTGTCGGTGCCAACATCCTGGCCGCCGGCCCATTCTCCGGT
GGTTCCATGAACCCGGCCCGTTCCTTCGGGCCTGCCGTTGCCAGCGGCAA
CTT
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