CX295849

Overview
NameCX295849
Unique NameCX295849
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: AB32G_ARATH (ABC transporter G family member 32 OS=Arabidopsis thaliana GN=ABCG32 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.048e-43
Identity = 81/168 (48.21%), Postives = 109/168 (64.88%), Query Frame = -1
Query:  194 ISSKCVYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 697
            ++   +Y  I YAM  F+W   KF  + +FM+ S + FT YGMM  A+TP   VA+I+ + F  +WNLFSGF++    IP+WWRWYYW +PVAW LYGL+  Q GD E  V++ DG +  M VKQ +ED   +K DF+ V +IM + +   F  VFA+AIKA NFQRR
Sbjct: 1254 LAQSTIYSTIFYAMAAFEWSAVKFLWYLFFMYFSIMYFTFYGMMTTAITPNHNVASIIAAPFYMLWNLFSGFMIPYKRIPLWWRWYYWANPVAWTLYGLLVSQYGDDERSVKLSDGIHQVM-VKQLLEDVMGYKHDFLGVSAIMVVAFCVFFSLVFAFAIKAFNFQRR 1420          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.593e-43
Identity = 77/163 (47.24%), Postives = 111/163 (68.10%), Query Frame = -1
Query:  194 VYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 682
            +Y +I+Y+MIGFKW   KF  + +FM+ +F+ FT YGMM V LTP   VA+IV S F  +WNLFSGF++ R  +P+WWRWY W+ PVAW LYGLV  Q GD+  +  + DG      VK F+E+ +DFK  ++ VV+++ + +  +F F+F +AI  +NFQ+R
Sbjct: 1308 IYGIIVYSMIGFKWTAAKFFWYLFFMFFTFLYFTFYGMMAVGLTPSYHVASIVSSAFYGIWNLFSGFIIPRPKVPIWWRWYCWICPVAWTLYGLVASQFGDI--MTPMDDGT----PVKIFVENYFDFKHSWLGVVAVVIVAFTMLFAFLFGFAIMKLNFQKR 1464          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: AB35G_ARATH (ABC transporter G family member 35 OS=Arabidopsis thaliana GN=ABCG35 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.918e-42
Identity = 77/162 (47.53%), Postives = 111/162 (68.52%), Query Frame = -1
Query:  194 YVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 679
            Y LI+Y+M+GF+W+  KF  F +  + SF+ +T YGMM V+LTP QQVA+I  S F  ++NLFSGF + R  IP WW WYYW+ PVAW +YGL+T Q GD+E+ + +  G    +TVKQ+I+D Y F+ D++  V+ + + +   F F+FA+ IK +NFQ R
Sbjct: 1282 YSLIIYSMVGFEWKASKFLWFIFINYFSFLYWTYYGMMTVSLTPNQQVASIFASAFYGIFNLFSGFFIPRPKIPKWWVWYYWICPVAWTIYGLITSQYGDVETPIALL-GGAPGLTVKQYIKDQYGFESDYMGPVAGVLVGFTVFFAFIFAFCIKTLNFQSR 1442          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: AB29G_ARATH (ABC transporter G family member 29 OS=Arabidopsis thaliana GN=ABCG29 PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 3.618e-41
Identity = 74/162 (45.68%), Postives = 109/162 (67.28%), Query Frame = -1
Query:  194 YVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 679
            Y LI+YAM+ F+W L KF  F++  + SF+ FT YGMM VALTP QQVA +    F  ++NLFSGF++ R  IP WW WYYW+ PVAW +YGL+  Q GD+E  +++P G     T+K +IE++Y +  DF+  ++ + + +   F F+FA+ I+ +NFQ+R
Sbjct: 1256 YTLIIYAMMCFEWTLAKFFWFYFVSFMSFLYFTYYGMMTVALTPNQQVAAVFAGAFYGLFNLFSGFVIPRPRIPKWWIWYYWICPVAWTVYGLIVSQYGDVEDTIKVP-GMANDPTIKWYIENHYGYDADFMIPIATVLVGFTLFFAFMFAFGIRTLNFQQR 1416          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: PDR1_ORYSJ (Probable pleiotropic drug resistance protein 1 OS=Oryza sativa subsp. japonica GN=PDR1 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.345e-40
Identity = 72/163 (44.17%), Postives = 111/163 (68.10%), Query Frame = -1
Query:  194 VYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 682
            +Y +I+Y+MIGF+W + KF  + +FM+ + + FT YGMM V LTP   VA+IV S F ++WNLF+GF+++R   PVWWRWY W+ PVAW LYGL+  Q GD+  +  + DG    + V  F+E+ +DFK  ++  V+++ + +  +F F+F +AI  +NFQ+R
Sbjct: 1312 IYSIIVYSMIGFQWTVAKFFWYLFFMFFTLLYFTFYGMMAVGLTPSYHVASIVSSAFYAIWNLFTGFVISRPATPVWWRWYCWICPVAWTLYGLIVSQYGDI--VTPMDDG----IPVNVFVENYFDFKHSWLGFVAVVIVAFTMLFAFLFGFAIMKLNFQKR 1468          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: PDR12_ORYSJ (Pleiotropic drug resistance protein 12 OS=Oryza sativa subsp. japonica GN=PDR12 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.063e-40
Identity = 71/162 (43.83%), Postives = 107/162 (66.05%), Query Frame = -1
Query:  194 YVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 679
            Y LI+YAM+ F+W   KF  FF+  + SF+ FT YGMM VA++P  +VA I  + F S++NLFSGF + R  IP WW WYYWL P+AW +YGL+  Q GDLE ++ +P  +N   T+  ++  ++ + + F+PVV+ + +++   F F++A  IK +NFQ R
Sbjct: 1341 YTLIVYAMMSFQWTAAKFFWFFFVSYFSFLYFTYYGMMTVAISPNHEVAAIFAAAFYSLFNLFSGFFIPRPRIPKWWIWYYWLCPLAWTVYGLIVTQYGDLEQIISVPGQSN--QTISYYVTHHFGYHRKFMPVVAPVLVLFAVFFAFMYAICIKKLNFQHR 1500          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: PDR7_ORYSJ (Putative pleiotropic drug resistance protein 7 OS=Oryza sativa subsp. japonica GN=PDR7 PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.823e-40
Identity = 75/163 (46.01%), Postives = 107/163 (65.64%), Query Frame = -1
Query:  194 VYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 682
            VY LI+Y++IGF W + KF  + +FM+ +F+ FT YGMM VA+TP   +A IV + F  +WN+F+GFL+ R  IP+WWRWY W  PVAW LYGLV  Q GD+ +   + DG      V+ +I   + F+ D++  V+   + + A+F FVFA++IK  NFQRR
Sbjct: 1287 VYGLIVYSLIGFDWTVEKFFWYMFFMFFTFMYFTFYGMMAVAMTPNSDIAAIVSTAFYCIWNIFAGFLIPRPRIPIWWRWYSWACPVAWTLYGLVASQYGDITNST-LEDGE----VVQDYIRRYFGFRHDYLGYVATAVVGFAALFAFVFAFSIKVFNFQRR 1444          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: PDR6_ORYSJ (Pleiotropic drug resistance protein 6 OS=Oryza sativa subsp. japonica GN=PDR6 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.985e-39
Identity = 74/163 (45.40%), Postives = 105/163 (64.42%), Query Frame = -1
Query:  194 VYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 682
            +Y  I Y++  F+W   KF  + +FM+ + + FT YGMM  A+TP   VA I+ + F ++WNLF GF++ R  IP WWRWYYW +PV+W LYGL+T Q GDL+  + + DG  T  T   F+ D++ F+ DF+ VV+ M   +  +F  VFA AIK +NFQRR
Sbjct: 1289 IYGTIFYSLGSFEWTAVKFLWYLFFMYFTLLYFTFYGMMTTAITPNHTVAPIIAAPFYTLWNLFCGFMIPRKRIPAWWRWYYWANPVSWTLYGLLTSQFGDLDQPLLLADGITT-TTAVDFLRDHFGFRHDFLGVVAGMVAGFCVLFAVVFALAIKYLNFQRR 1450          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: PDR15_ORYSJ (Pleiotropic drug resistance protein 15 OS=Oryza sativa subsp. japonica GN=PDR15 PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.681e-38
Identity = 71/163 (43.56%), Postives = 107/163 (65.64%), Query Frame = -1
Query:  194 VYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 682
            +Y LI+Y M+ F+W   KF  FFY  + +F+ FT YGMM V+++P  QVA+I+ + F +++NLFSGF + R  IP WW WYYWL PVAW +YGL+  Q GD+E  + +P    +   V+ FI+D + +  DF+ VV+ +   +   F F +AY+I+ +NFQ+R
Sbjct: 1349 IYTLIVYPMMSFQWTPAKFFWFFYVSFFTFLYFTYYGMMNVSVSPNLQVASILGAAFYTLFNLFSGFFIPRPKIPKWWVWYYWLCPVAWTVYGLIVSQYGDVEDFITVP--GQSDQQVRPFIKDYFGYDPDFMGVVAAVLAGFTVFFAFTYAYSIRTLNFQQR 1509          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSJ (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica GN=PDR3 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.195e-38
Identity = 75/163 (46.01%), Postives = 105/163 (64.42%), Query Frame = -1
Query:  194 VYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 682
            VY +I+YAMIGF+W   KF  + +FM  + + FT YGMM V LTP   +A+IV S F ++WNLFSGF++ R  +P+WWRWY W  PVAW LYGLV  Q GD+E+ +E  DG      VK F+E+ + FK  ++  V+ +   +  +F  +F +AI   NFQ+R
Sbjct: 1301 VYGIIVYAMIGFEWTAAKFFWYLFFMVFTLLYFTFYGMMAVGLTPNYHIASIVSSAFYAIWNLFSGFVIPRPRVPIWWRWYCWACPVAWTLYGLVVSQFGDIETPME--DGT----PVKVFVENYFGFKHSWLGWVATVVAAFAFLFASLFGFAIMKFNFQKR 1457          
The following BLAST results are available for this feature:
BLAST of CX295849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
AB32G_ARATH5.048e-4348.21ABC transporter G family member 32 OS=Arabidopsis ... [more]
PDR2_ORYSJ6.593e-4347.24Probable pleiotropic drug resistance protein 2 OS=... [more]
AB35G_ARATH1.918e-4247.53ABC transporter G family member 35 OS=Arabidopsis ... [more]
AB29G_ARATH3.618e-4145.68ABC transporter G family member 29 OS=Arabidopsis ... [more]
PDR1_ORYSJ2.345e-4044.17Probable pleiotropic drug resistance protein 1 OS=... [more]
PDR12_ORYSJ3.063e-4043.83Pleiotropic drug resistance protein 12 OS=Oryza sa... [more]
PDR7_ORYSJ6.823e-4046.01Putative pleiotropic drug resistance protein 7 OS=... [more]
PDR6_ORYSJ1.985e-3945.40Pleiotropic drug resistance protein 6 OS=Oryza sat... [more]
PDR15_ORYSJ1.681e-3843.56Pleiotropic drug resistance protein 15 OS=Oryza sa... [more]
PDR3_ORYSJ2.195e-3846.01Pleiotropic drug resistance protein 3 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionC05076E08SK DroRLeaf1 Citrus clementina cDNA clone C05076E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295849 ID=CX295849; Name=CX295849; organism=Citrus clementina; type=EST; length=715bp
TTTTTTTTTTTTTTTTTTCTGTCAAAAAAATACTTGCATTCTTATTGAAC
AAAGTACATTACAAACATACATTTATATCACAGTCAATTACTAAACAAGA
AAAAGGAAGTACAAAAGAAAAAAAAAATGTGGTAACCTTTTGTTTCCCAC
ATGCTCACTTAGGTCTACCATTCTTAAGATTTAAGCTGGTTTATCTCCTT
TGGAAGTTGATGGCCTTGATGGCATAGGCAAACACAAACAAGAACACAGC
CATCCAGACAATATGCATGATACTAACGACAGGAATGAAATCTTTCTTGA
AATCATAATTATCTTCGATGAATTGCTTCACTGTCATTTTAGTATTATTA
CCATCAGGAATCTCCACAAGTGACTCTAAGTCACCAACTTGACAAGTCAC
AAGGCCATACAGATTCCAAGCCACCGGAGAAAGCCAGTAGTACCACCTCC
ACCAGACAGGAATATCCGATCTGGCAACGAGGAAACCGGAGAACAAGTTC
CATACACTAAGGAAGAAGGACAAGACAATGGTAGCAACTTGCTGGCCAGG
AGTCAATGCGACAATCATCATTCCGTACAATGTGAAAATGATAAAAGACG
CCCACATGAAGTAGAAGAACAAGCAGAATTTTCCCAGCTCCCACTTGAAT
CCAATCATCGCGTAAAGGATAAGAACATACACACACTTTGAACTGATACA
TATATTATCTCTACG
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