CX295849

Overview
NameCX295849
Unique NameCX295849
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSI (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. indica GN=PDR3 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.195e-38
Identity = 75/163 (46.01%), Postives = 105/163 (64.42%), Query Frame = -1
Query:  194 VYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 682
            VY +I+YAMIGF+W   KF  + +FM  + + FT YGMM V LTP   +A+IV S F ++WNLFSGF++ R  +P+WWRWY W  PVAW LYGLV  Q GD+E+ +E  DG      VK F+E+ + FK  ++  V+ +   +  +F  +F +AI   NFQ+R
Sbjct: 1301 VYGIIVYAMIGFEWTAAKFFWYLFFMVFTLLYFTFYGMMAVGLTPNYHIASIVSSAFYAIWNLFSGFVIPRPRVPIWWRWYCWACPVAWTLYGLVVSQFGDIETPME--DGT----PVKVFVENYFGFKHSWLGWVATVVAAFAFLFASLFGFAIMKFNFQKR 1457          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: AB31G_ARATH (ABC transporter G family member 31 OS=Arabidopsis thaliana GN=ABCG31 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.683e-36
Identity = 73/168 (43.45%), Postives = 108/168 (64.29%), Query Frame = -1
Query:  194 ISSKCVYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 697
            ++   +Y +I Y  IGF+    KF L+  FM+ +F  FT YGMM V LTP Q +A ++ S F S+WNL SGFLV +  IPVWW W+Y++ PVAW L G++  Q+GD+ES++  P  +    TVK+FIE  + +K + I V + + + + A+F   FA ++K +NFQRR
Sbjct: 1262 LTQTILYGVITYFTIGFERTFSKFVLYLVFMFLTFTYFTFYGMMAVGLTPNQHLAAVISSAFYSLWNLLSGFLVQKPLIPVWWIWFYYICPVAWTLQGVILSQLGDVESMINEPLFHG---TVKEFIEYYFGYKPNMIGVSAAVLVGFCALFFSAFALSVKYLNFQRR 1426          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: PDR3_TOBAC (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum GN=PDR3 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.009e-32
Identity = 64/168 (38.10%), Postives = 104/168 (61.90%), Query Frame = -1
Query:  194 ISSKCVYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 697
            ++    + +I Y MIG+ W   K   +FY M+ + + FT  GMM+V++TP   VA I+ S F +++NLF+GFL+ ++ IP WW W+Y+L+P +W L G++T Q GD+E  + +      K TV  F+ D + F  + +P+V+ + I +  VF  +FA+ I  +NFQRR
Sbjct: 1283 LAQALAFTVITYPMIGYYWSAYKVFWYFYSMFCTLLYFTYLGMMLVSMTPSFPVAAILQSSFYTMFNLFAGFLMPKAQIPKWWIWFYYLTPTSWTLNGMLTSQYGDIEKEITV---FQEKKTVAAFLGDYFGFHHNQLPIVAFVLIAYPLVFASLFAFFIGKLNFQRR 1447          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: PDR13_ORYSJ (Pleiotropic drug resistance protein 13 OS=Oryza sativa subsp. japonica GN=PDR13 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.990e-31
Identity = 64/164 (39.02%), Postives = 102/164 (62.20%), Query Frame = -1
Query:  197 VYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIP--DGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQR 682
            ++ LI Y M+ ++  + K  L+  +M+ +F  FT YGM+ V LTP Q +A++V S F S+WNL SGFL+ +S IP WW W+Y++ PVAW L G++T Q+GD+++ +  P  DG     TV +F++ N  F++        + + +   F  ++A +IK INFQR
Sbjct: 1282 IFGLITYFMVNYERNIRKLVLYLIYMFLTFTYFTFYGMVAVGLTPTQHMASVVSSAFYSLWNLLSGFLIPQSRIPGWWIWFYYICPVAWTLRGVITSQLGDVDTRIVGPGFDG-----TVHEFLQQNLGFEQGMTGATVAVLVAFSVFFFSIYAISIKMINFQR 1440          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: AB38G_ARATH (ABC transporter G family member 38 OS=Arabidopsis thaliana GN=ABCG38 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.873e-30
Identity = 58/168 (34.52%), Postives = 107/168 (63.69%), Query Frame = -1
Query:  194 ISSKCVYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 697
            ++  C+Y +I+Y MIG++W   KF L  +F + S +     G+M+++++P Q++A+I+     + WN+FSGF + R  + VW RW+ ++ P  W LYGL   Q GD+E+ ++      T  TV +F+++ Y ++ +F+ VVS+  I +   F+F++A+++K +NFQ+R
Sbjct: 1257 MAQACIYGVIVYGMIGYEWTASKFFLNIFFTFISILYSIYTGIMVISVSPNQEIASILNGVISTSWNVFSGFTIPRPRMHVWLRWFTYVCPGWWGLYGLTIAQYGDVETRLD------TGETVVEFMKNYYGYEYNFLWVVSLTLIAFSMFFVFIYAFSVKILNFQKR 1418          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: AB43G_ARATH (ABC transporter G family member 43 OS=Arabidopsis thaliana GN=ABCG43 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.207e-28
Identity = 58/163 (35.58%), Postives = 103/163 (63.19%), Query Frame = -1
Query:  194 VYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 682
            +YV+I+Y M+G+ W + K    FY ++ S +IF  +GM++V +TP   +A  + S F ++ NLF+G+++ + +IP WW W Y+LSP +W L GL+T Q GD+E  + +  G   K  V  F+ED + ++ D + +V+++ I +  +   +FA+ I  +NFQ++
Sbjct: 1231 IYVIIVYPMVGYHWSVYKVFWSFYSIFCSLLIFNYFGMLLVVVTPNVHIAFTLRSSFYAIVNLFAGYVMPKPNIPRWWIWMYYLSPTSWVLNGLLTSQYGDMEKEI-LAFGEKKK--VSAFLEDYFGYRYDSLALVAVVLIAFPILLASLFAFFIGKLNFQKK 1390          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: AB42G_ARATH (ABC transporter G family member 42 OS=Arabidopsis thaliana GN=ABCG42 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.577e-28
Identity = 58/163 (35.58%), Postives = 103/163 (63.19%), Query Frame = -1
Query:  194 VYVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 682
            VYV+I+Y M+G+ W + K    FY ++ + +IF  +GM++V +TP   +A  + S F ++ NLF+G+++ + +IP WW W Y+LSP +W L GL+T Q GD+E  + +  G   K  V  F+ED + ++ D + +V+++ I +  +   +FA+ I  +NFQ++
Sbjct: 1233 VYVIIVYPMVGYHWSVFKVFWSFYSIFCTLLIFNYFGMLLVVVTPNVHIAFTLRSSFYAIVNLFAGYVMPKPNIPRWWIWMYYLSPTSWVLNGLLTSQYGDMEKEI-LAFGEKKK--VSDFLEDYFGYRYDSLALVAVVLIAFPILLASLFAFFIGKLNFQKK 1392          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: AB41G_ARATH (ABC transporter G family member 41 OS=Arabidopsis thaliana GN=ABCG41 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.287e-26
Identity = 58/160 (36.25%), Postives = 96/160 (60.00%), Query Frame = -1
Query:  194 LILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 673
            +I+Y MIG+   + K     Y ++ S +IF   GM++VALTP   +A  + S F S+ NLF+GF++ +  IP WW W Y+LSP +W L GL++ Q GD+E  + +      K +V  F+ED + +K D + VV+ + I +  +   +FA+ +  +NFQ++
Sbjct: 1241 IIVYPMIGYHMSVYKMFWSLYSIFCSLLIFNYCGMLMVALTPNIHMALTLRSTFFSMVNLFAGFVMPKQKIPKWWIWMYYLSPTSWVLEGLLSSQYGDVEKEITV---FGEKKSVSAFLEDYFGYKHDSLAVVAFVLIAFPIIVASLFAFFMSKLNFQKK 1397          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: AB37G_ARATH (ABC transporter G family member 37 OS=Arabidopsis thaliana GN=ABCG37 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.608e-26
Identity = 57/162 (35.19%), Postives = 93/162 (57.41%), Query Frame = -1
Query:  194 YVLILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 679
            +V++ Y MIGF     K     Y M+ S + F    M +V++TP   VA I+ S F   +NLFSGFL+ ++ +P WW W Y+L+P +W L G ++ Q GD+   + +  G +T  TV +F++D + F  D + V +++ I +      +FA+ +  +NFQRR
Sbjct: 1292 FVIVTYPMIGFYPSAYKVFWSLYSMFCSLLTFNYLAMFLVSITPNFMVAAILQSLFYVGFNLFSGFLIPQTQVPGWWIWLYYLTPTSWTLNGFISSQYGDIHEEINV-FGQST--TVARFLKDYFGFHHDLLAVTAVVQIAFPIALASMFAFFVGKLNFQRR 1450          
BLAST of CX295849 vs. ExPASy Swiss-Prot
Match: AB30G_ARATH (ABC transporter G family member 30 OS=Arabidopsis thaliana GN=ABCG30 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 3.077e-24
Identity = 54/160 (33.75%), Postives = 94/160 (58.75%), Query Frame = -1
Query:  194 LILYAMIGFKWELGKFCLFFYFMWASFIIFTLYGMMIVALTPGQQVATIVLSFFLSVWNLFSGFLVARSDIPVWWRWYYWLSPVAWNLYGLVTCQVGDLESLVEIPDGNNTKMTVKQFIEDNYDFKKDFIPVVSIMHIVWMAVFLFVFAYAIKAINFQRR 673
            +I+Y  IG+   + K     Y ++ S +IF   GM++VALTP   +A  + S F S+ NLF+GF++ +  IP WW W Y+LSP +W L GL++ Q GD++  + +      K  V  F+ED + +K + + VV+ + I +  +   +FA+ +  ++FQ++
Sbjct: 1244 IIVYPTIGYHMSVYKMFWSLYSIFCSLLIFNYSGMLMVALTPNIHMAVTLRSSFFSMLNLFAGFVIPKQKIPKWWIWMYYLSPTSWVLEGLLSSQYGDVDKEILV---FGEKKRVSAFLEDYFGYKHESLAVVAFVLIAYPIIVATLFAFFMSKLSFQKK 1400          
The following BLAST results are available for this feature:
BLAST of CX295849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
PDR3_ORYSI2.195e-3846.01Pleiotropic drug resistance protein 3 OS=Oryza sat... [more]
AB31G_ARATH2.683e-3643.45ABC transporter G family member 31 OS=Arabidopsis ... [more]
PDR3_TOBAC4.009e-3238.10Pleiotropic drug resistance protein 3 OS=Nicotiana... [more]
PDR13_ORYSJ1.990e-3139.02Pleiotropic drug resistance protein 13 OS=Oryza sa... [more]
AB38G_ARATH2.873e-3034.52ABC transporter G family member 38 OS=Arabidopsis ... [more]
AB43G_ARATH1.207e-2835.58ABC transporter G family member 43 OS=Arabidopsis ... [more]
AB42G_ARATH1.577e-2835.58ABC transporter G family member 42 OS=Arabidopsis ... [more]
AB41G_ARATH3.287e-2636.25ABC transporter G family member 41 OS=Arabidopsis ... [more]
AB37G_ARATH5.608e-2635.19ABC transporter G family member 37 OS=Arabidopsis ... [more]
AB30G_ARATH3.077e-2433.75ABC transporter G family member 30 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC05076E08SK DroRLeaf1 Citrus clementina cDNA clone C05076E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295849 ID=CX295849; Name=CX295849; organism=Citrus clementina; type=EST; length=715bp
TTTTTTTTTTTTTTTTTTCTGTCAAAAAAATACTTGCATTCTTATTGAAC
AAAGTACATTACAAACATACATTTATATCACAGTCAATTACTAAACAAGA
AAAAGGAAGTACAAAAGAAAAAAAAAATGTGGTAACCTTTTGTTTCCCAC
ATGCTCACTTAGGTCTACCATTCTTAAGATTTAAGCTGGTTTATCTCCTT
TGGAAGTTGATGGCCTTGATGGCATAGGCAAACACAAACAAGAACACAGC
CATCCAGACAATATGCATGATACTAACGACAGGAATGAAATCTTTCTTGA
AATCATAATTATCTTCGATGAATTGCTTCACTGTCATTTTAGTATTATTA
CCATCAGGAATCTCCACAAGTGACTCTAAGTCACCAACTTGACAAGTCAC
AAGGCCATACAGATTCCAAGCCACCGGAGAAAGCCAGTAGTACCACCTCC
ACCAGACAGGAATATCCGATCTGGCAACGAGGAAACCGGAGAACAAGTTC
CATACACTAAGGAAGAAGGACAAGACAATGGTAGCAACTTGCTGGCCAGG
AGTCAATGCGACAATCATCATTCCGTACAATGTGAAAATGATAAAAGACG
CCCACATGAAGTAGAAGAACAAGCAGAATTTTCCCAGCTCCCACTTGAAT
CCAATCATCGCGTAAAGGATAAGAACATACACACACTTTGAACTGATACA
TATATTATCTCTACG
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