CX295850

Overview
NameCX295850
Unique NameCX295850
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295850 vs. ExPASy Swiss-Prot
Match: FENR_SYNP2 (Ferredoxin--NADP reductase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=petH PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.936e-50
Identity = 105/206 (50.97%), Postives = 140/206 (67.96%), Query Frame = 3
Query:  129 GGRVVSVR-----AQVTTEAPAKVEKES-------------KKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFS-TEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTN-ENGEIVKGVCSNFLCDLKPGA-EVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLW 683
            GG++VS+R     AQ+ +E  +  +  +             K  +  V VN ++PKTP++G+C+ N ++  +   G   H+ F  +EG++ Y EGQSIG+I  G DKNGKPHKLRLYSIAS+  GD  D+KTVSLCV++L Y + E+GE V GVCS +LC+L  G  +VKITGPVGKEML+P D +ATV+MLATGTGIAPFR FLW
Sbjct:   65 GGKIVSIRPAEDAAQIVSEGQSSAQASAQSPMASSTKIVHPKTTDTSVPVNIYRPKTPFLGKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGEDKNGKPHKLRLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCNLPVGTDDVKITGPVGKEMLLPDDEDATVVMLATGTGIAPFRAFLW 270          
BLAST of CX295850 vs. ExPASy Swiss-Prot
Match: FENR_SPISP (Ferredoxin--NADP reductase OS=Spirulina sp. GN=petH PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.332e-49
Identity = 95/156 (60.90%), Postives = 117/156 (75.00%), Query Frame = 3
Query:  222 VNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEG-EVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTN-ENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLW 683
            VN +KPK PYIG+CL N ++  +   G   H++F   G ++ Y EGQSIG+I  G D NGKPHKLRLYSIAS+  GD  D KTVSLCV++L Y + E GE V GVCS +LC+L+ GA+V ITGPVGKEML+P D +AT+IM+ATGTGIAPFR FLW
Sbjct:    7 VNIYKPKNPYIGKCLSNEELVREGGTGTVRHLIFDISGGDLRYLEGQSIGIIPPGTDNNGKPHKLRLYSIASTRHGDHVDDKTVSLCVRQLEYKHPETGETVYGVCSTYLCNLEAGADVAITGPVGKEMLLPEDEDATIIMMATGTGIAPFRAFLW 162          
BLAST of CX295850 vs. ExPASy Swiss-Prot
Match: FENR_THEEB (Ferredoxin--NADP reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=petH PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.684e-49
Identity = 103/196 (52.55%), Postives = 130/196 (66.33%), Query Frame = 3
Query:  129 GGRVVSVRAQVTTEAPAKVEKES---------KKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEG-EVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTN-ENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLW 683
            GG++VS++    T AP     E          K+ +  + VN ++P  P IG+ + N ++  +   G   H++F   G E+ Y EGQSIG+I  G D NGKPHKLRLYSIAS+  GDF D KTVSLCV+RL Y + E GE + GVCS++L  L+PG EVKITGPVGKEML+  DP AT+IMLATGTGIAPFR FLW
Sbjct:   58 GGKIVSIQPLNGTVAPLAATTEPAANNGAAPVKEKKVDIPVNIYRPNNPCIGKVISNEELVREGGEGTVKHIIFDISGTELRYLEGQSIGIIPAGTDANGKPHKLRLYSIASTRHGDFQDDKTVSLCVRRLEYKDKETGETIYGVCSSYLNQLQPGDEVKITGPVGKEMLLSDDPEATIIMLATGTGIAPFRAFLW 253          
BLAST of CX295850 vs. ExPASy Swiss-Prot
Match: FENR_ANASP (Ferredoxin--NADP reductase OS=Anabaena sp. (strain PCC 7120) GN=petH PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.980e-45
Identity = 93/166 (56.02%), Postives = 117/166 (70.48%), Query Frame = 3
Query:  192 ESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFS-TEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTN-ENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLW 683
            ++K     V VN ++P  P+IG+ + N  +  +   G   H+ F  T G + Y EGQSIG+I  GVDKNGKP KLRLYSIAS+  GD  D KT+SLCV++L Y + E+GE V GVCS +L  ++PG+EVKITGPVGKEML+P DP A VIMLATGTGIAP R +LW
Sbjct:  139 QAKAKHADVPVNLYRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVDKNGKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLW 304          
BLAST of CX295850 vs. ExPASy Swiss-Prot
Match: FENR_ANASO (Ferredoxin--NADP reductase OS=Anabaena sp. (strain PCC 7119) GN=petH PE=1 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 4.980e-45
Identity = 93/166 (56.02%), Postives = 117/166 (70.48%), Query Frame = 3
Query:  192 ESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFS-TEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTN-ENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLW 683
            ++K     V VN ++P  P+IG+ + N  +  +   G   H+ F  T G + Y EGQSIG+I  GVDKNGKP KLRLYSIAS+  GD  D KT+SLCV++L Y + E+GE V GVCS +L  ++PG+EVKITGPVGKEML+P DP A VIMLATGTGIAP R +LW
Sbjct:  139 QAKAKHADVPVNLYRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVDKNGKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLW 304          
BLAST of CX295850 vs. ExPASy Swiss-Prot
Match: FENR_ANAVT (Ferredoxin--NADP reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=petH PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.504e-45
Identity = 93/166 (56.02%), Postives = 116/166 (69.88%), Query Frame = 3
Query:  192 ESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFS-TEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTN-ENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLW 683
            ++K     V VN ++P  P+IG+ + N  +  +   G   H+ F  T G + Y EGQSIG+I  GVDKNGKP KLRLYSIAS+  GD  D KT+SLCV++L Y + E GE V GVCS +L  ++PG+EVKITGPVGKEML+P DP A VIMLATGTGIAP R +LW
Sbjct:  139 QAKAKHADVPVNLYRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVDKNGKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPETGETVYGVCSTYLTHIEPGSEVKITGPVGKEMLLPDDPEANVIMLATGTGIAPMRTYLW 304          
BLAST of CX295850 vs. ExPASy Swiss-Prot
Match: FENR2_TOBAC (Ferredoxin--NADP reductase, root-type isozyme, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.499e-41
Identity = 99/211 (46.92%), Postives = 124/211 (58.77%), Query Frame = 3
Query:   69 ISPDRITLKKVPFYYKDVSTGGRVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVD--KNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVY----TNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRD-PNATVIMLATGTGIAPFRGFL 680
            IS   I LK  P      S    +V +  Q  ++A   V   S +  +   +N +KPK PY    +   ++ G  APGET H+V   +G +PY EGQS GVI  G +  K G PH +RLY IAS+  GD  D KT SLCV+R VY    T +      GVCSNFLCD KPG +VKITGP GK ML+P + PNAT IM+ TGTG+APFRG+L
Sbjct:   40 ISMPPIDLKAAP------SRNQHIVCMSVQQASKAKVSVSPLSLEDAKEPPLNIYKPKEPYTATIVSVERLVGPKAPGETCHIVIDHDGNLPYWEGQSYGVIPPGENPKKPGNPHNVRLYLIASTRYGDSFDGKTASLCVRRAVYYDPETGKEDPSKNGVCSNFLCDSKPGDKVKITGPSGKIMLLPEEIPNATHIMIGTGTGVAPFRGYL 244          
BLAST of CX295850 vs. ExPASy Swiss-Prot
Match: FNRR2_ARATH (Ferredoxin--NADP reductase, root isozyme 2, chloroplastic OS=Arabidopsis thaliana GN=RFNR2 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.958e-41
Identity = 87/160 (54.37%), Postives = 109/160 (68.12%), Query Frame = 3
Query:  222 VNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVD--KNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVY----TNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPR-DPNATVIMLATGTGIAPFRGFL 680
            +N +KPK  Y  + +   ++ G  APGET H+V   +G +PY EGQS GVI  G +  K G PH +RLYSIAS+  GDF D KT SLCV+R VY    T +      GVCSNFLCD KPG +++ITGP GK ML+P  DPNAT IM+ATGTG+AP+RG+L
Sbjct:   91 LNLYKPKESYTAKIVSVERVVGPKAPGETCHIVIDHDGNLPYWEGQSYGVIPPGENPKKPGAPHNVRLYSIASTRYGDFFDGKTASLCVRRAVYYDPETGKEDPSKNGVCSNFLCDSKPGDKIQITGPSGKVMLLPESDPNATHIMIATGTGVAPYRGYL 250          
BLAST of CX295850 vs. ExPASy Swiss-Prot
Match: FENR2_ORYSJ (Ferredoxin--NADP reductase, root isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0784700 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.958e-41
Identity = 92/189 (48.68%), Postives = 118/189 (62.43%), Query Frame = 3
Query:  135 RVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVD--KNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVY----TNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMP-RDPNATVIMLATGTGIAPFRGFL 680
            +V+ +  Q  +E+   V+    +      +N +KPK PY    +   +I G  APGET H+V    G VPY EGQS G+I  G +  K G PH +RLYSIAS+  GD  D +T SLCV+R VY    T +      GVCSNFLC+ KPG +VK+TGP GK ML+P  DPNAT IM+ATGTG+APFRG+L
Sbjct:   58 KVLCMSVQQASESKVAVKPLDLESANEPPLNTYKPKEPYTATIVSVERIVGPKAPGETCHIVIDHGGNVPYWEGQSYGIIPPGENPKKPGAPHNVRLYSIASTRYGDSFDGRTTSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKPGDKVKVTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYL 246          
BLAST of CX295850 vs. ExPASy Swiss-Prot
Match: FENR2_PEA (Ferredoxin--NADP reductase, root isozyme, chloroplastic OS=Pisum sativum PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 5.697e-41
Identity = 92/179 (51.40%), Postives = 115/179 (64.25%), Query Frame = 3
Query:  165 TEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVD--KNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVY----TNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPR-DPNATVIMLATGTGIAPFRGFL 680
            T +P ++E  S+       +N  KPK PY    +   ++ G  APGET H+V + +G VPY EGQS GVI  G +  K G PH +RLYSIAS+  GD  D KT SLCV+R VY    T +      GVCSNFLCD KPG ++KI GP GK ML+P  DPNAT IM+ATGTG+AP+RG+L
Sbjct:   72 TVSPLELENPSEPP-----LNLHKPKEPYTATIVSVERLVGPKAPGETCHIVINHDGNVPYWEGQSYGVIPPGENPKKPGSPHNVRLYSIASTRYGDNFDGKTASLCVRRAVYYDPVTGKEDPSKNGVCSNFLCDSKPGDKIKIAGPSGKIMLLPEDDPNATHIMIATGTGVAPYRGYL 245          
The following BLAST results are available for this feature:
BLAST of CX295850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
FENR_SYNP23.936e-5050.97Ferredoxin--NADP reductase OS=Synechococcus sp. (s... [more]
FENR_SPISP3.332e-4960.90Ferredoxin--NADP reductase OS=Spirulina sp. GN=pet... [more]
FENR_THEEB5.684e-4952.55Ferredoxin--NADP reductase OS=Thermosynechococcus ... [more]
FENR_ANASP4.980e-4556.02Ferredoxin--NADP reductase OS=Anabaena sp. (strain... [more]
FENR_ANASO4.980e-4556.02Ferredoxin--NADP reductase OS=Anabaena sp. (strain... [more]
FENR_ANAVT6.504e-4556.02Ferredoxin--NADP reductase OS=Anabaena variabilis ... [more]
FENR2_TOBAC1.499e-4146.92Ferredoxin--NADP reductase, root-type isozyme, chl... [more]
FNRR2_ARATH1.958e-4154.38Ferredoxin--NADP reductase, root isozyme 2, chloro... [more]
FENR2_ORYSJ1.958e-4148.68Ferredoxin--NADP reductase, root isozyme, chloropl... [more]
FENR2_PEA5.697e-4151.40Ferredoxin--NADP reductase, root isozyme, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionC05076E09SK DroRLeaf1 Citrus clementina cDNA clone C05076E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295850 ID=CX295850; Name=CX295850; organism=Citrus clementina; type=EST; length=684bp
ATGCAGTGAGTGCTGCATCTTCTCTTCCGACTTCCAAGTCCACTTCGCTT
CCAACCAGAACCTCTATCATCTCTCCTGACAGAATCACCTTAAAAAAGGT
TCCATTTTACTACAAAGATGTTTCAACTGGAGGGAGAGTGGTTTCTGTCA
GAGCTCAGGTTACCACTGAGGCTCCTGCTAAGGTCGAGAAAGAGTCCAAG
AAAATGGAGGAAGGTGTTATTGTTAACAAGTTCAAACCTAAGACACCTTA
CATTGGCAGATGCCTTTTAAACACTAAGATCACTGGTGATGATGCTCCTG
GAGAGACCTGGCACATGGTCTTCAGCACTGAAGGAGAGGTTCCCTACAAA
GAAGGGCAATCAATTGGGGTGATTGCAGATGGTGTTGACAAGAATGGGAA
GCCTCACAAACTGAGATTATACTCCATTGCTAGCAGTGCCCTTGGTGACT
TTGGAGACTCCAAAACTGTTTCTTTATGTGTGAAAAGGCTTGTGTACACC
AACGAAAATGGAGAAATTGTTAAGGGAGTCTGCTCAAATTTCTTGTGTGA
CTTGAAGCCTGGGGCTGAAGTGAAAATTACAGGACCTGTTGGGAAAGAAA
TGCTCATGCCAAGGGATCCCAATGCTACAGTCATCATGCTTGCGACTGGA
ACTGGAATCGCTCCATTCCGTGGATTTTTGTGGA
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