CX295851

Overview
NameCX295851
Unique NameCX295851
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295851 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.661e-12
Identity = 59/191 (30.89%), Postives = 79/191 (41.36%), Query Frame = 2
Query:   41 LRIIDLSYNQFTGVLPIWYLNGFKAM-MRRDDNSIEVNYMRSLNY-SYYESISLTMKGNDIQMERILTTFATI---DLSSNRFQGEISEVLGKLNSLKSLNISHNNLTGGIPSSLRNLTELESLDLSSNKLAGRIPTQXXXXXXXXXXXXXXXXXEGPIPGGPQFNTFGIDSYSGNVGLCGFPLSKICRID 598
            L I+DLS N  TG +P    N  K   +   +N +  +   S         ++LT    D  +   L     +   DLS N   GE+S  L  +  L  L I  N  TG IPS L NLT+LE LD+S N L+G IPT+                  G +P             SGN  LCG  +   C+I+
Sbjct:  630 LTILDLSGNALTGSIPKEMGNSLKLQGLNLANNQLNGHIPESFGLLGSLVKLNLTKNKLDGPVPASLGNLKELTHMDLSFNNLSGELSSELSTMEKLVGLYIEQNKFTGEIPSELGNLTQLEYLDVSENLLSGEIPTKICGLPNLEFLNLAKNNLRGEVPSDGVCQDPSKALLSGNKELCGRVVGSDCKIE 820          
BLAST of CX295851 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 2.169e-12
Identity = 53/178 (29.78%), Postives = 79/178 (44.38%), Query Frame = 2
Query:   32 FPKLRIIDLSYNQFTGVLPIWYLNGFKAMMRRDDNSIEVNYMRSLNYSYYESISLTMKGNDIQMERILTTFATIDLSSNRFQGEISEVLGKLNSLKSLNISHNNLTGGIPSSLRNLTELESLDLSSNKLAGRIPTQXXXXXXXXXXXXXXXXXEGPIPGGPQFNTFGIDSYSGNVGLC 565
            FP L+ + L  N+F G +P                  E+ ++  +N S     +  + G         +T  ++DLS NR  GEI + +  + +L +LNIS N LTG IP+ + N+T L +LDLS N L+GR+P                         G QF  F   S++GN  LC
Sbjct:  479 FPNLQTLFLDRNRFRGNIP--------------REIFELKHLSRINTS-----ANNITGGIPDSISRCSTLISVDLSRNRINGEIPKGINNVKNLGTLNISGNQLTGSIPTGIGNMTSLTTLDLSFNDLSGRVPL------------------------GGQFLVFNETSFAGNTYLC 613          
BLAST of CX295851 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.076e-11
Identity = 44/159 (27.67%), Postives = 69/159 (43.40%), Query Frame = 2
Query:   44 RIIDLSYNQFTGVLPIWYLNGFKAMMRRDDNSIEVNYMRSLNYSYYESISLTMKGNDIQME-----RILTTFATIDLSSNRFQGEISEVLGKLNSLKSLNISHNNLTGGIPSSLRNLTELESLDLSSNKLAGRIPTQXXXXXXXXXXXXXXXXXEGPIP 505
            +++DLSYNQ TG +P                          +  + +  +L+++GN +  +      ++   A +DLS N   G I  +LG L   + L +  N LTG IP  L N+++L  L+L+ N L G IP +                 EGPIP
Sbjct:  239 QVLDLSYNQLTGEIPF-------------------------DIGFLQVATLSLQGNQLSGKIPSVIGLMQALAVLDLSGNLLSGSIPPILGNLTFTEKLYLHSNKLTGSIPPELGNMSKLHYLELNDNHLTGHIPPELGKLTDLFDLNVANNDLEGPIP 372          
BLAST of CX295851 vs. ExPASy Swiss-Prot
Match: Y2579_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 OS=Arabidopsis thaliana GN=At2g25790 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11
Identity = 55/180 (30.56%), Postives = 74/180 (41.11%), Query Frame = 2
Query:   35 PKLRIIDLSYNQFTGVLPIWYLNGFKAMMRRDDNSIEVNYMRSLNYSYYESISLTMKGNDIQMERILTTFATI---DLSSNRFQGEISEVLGKLNSLKSLNISHNNLTGGIPSSLRNLTELESLDLSSNKLAGRIPTQXXXXXXXXXXXXXXXXXEGPIPGGPQFNTFGIDSYSGNVGLC 565
            P+L ++DLS N+F G LP      F    R          ++ L+ S  +   +  +G        L TF  I   DLS N   G I   L    +L +L++SHNN TG IPSS      L  LDLS N+L+G IP                    G +P    F      +  GN+ LC
Sbjct:  455 PQLEMLDLSVNKFFGELP-----DFSRSKR----------LKKLDLSRNKISGVVPQG--------LMTFPEIMDLDLSENEITGVIPRELSSCKNLVNLDLSHNNFTGEIPSSFAEFQVLSDLDLSCNQLSGEIPKNLGNIESLVQVNISHNLLHGSLPFTGAFLAINATAVEGNIDLC 611          
BLAST of CX295851 vs. ExPASy Swiss-Prot
Match: FLS2_ARATH (LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11
Identity = 49/149 (32.89%), Postives = 76/149 (51.01%), Query Frame = 2
Query:   38 KLRIIDLSYNQFTGVLP----------IWYL--NGFKAMMRRDDNSIEVNYMRSLNYSYYESISLTMKGNDIQ---MERI--LTTFATIDLSSNRFQGEISEVLGKLNSLKSLNISHNNLTGGIPSSLRNLTELESLDLSSNKLAGRIP 433
            KLRI+ +SYN  TG +P          I YL  NGF   + R+ +++ +               L M  ND++    E +  +   + +DLS+N+F G+I  +  KL SL  L++  N   G IP+SL++L+ L + D+S N L G IP
Sbjct:  480 KLRILQVSYNSLTGPIPREIGNLKDLNILYLHSNGFTGRIPREMSNLTLLQ------------GLRMYSNDLEGPIPEEMFDMKLLSVLDLSNNKFSGQIPALFSKLESLTYLSLQGNKFNGSIPASLKSLSLLNTFDISDNLLTGTIP 616          

HSP 2 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 54/184 (29.35%), Postives = 75/184 (40.76%), Query Frame = 2
Query:   41 LRIIDLSYNQFTGVLPIWYLNGFKAM---MRRDDNSIEVNYMRSLN-YSYYESISLT---MKGNDIQMERILTTFATIDLSSNRFQGEI-SEVLGKLNSLKSLNISHNNLTGGIPSSLRNLTELESLDLSSNKLAGRIPTQXXXXXXXXXXXXXXXXXEGPIPGGPQFNTFGIDSYSGNVGLCG 568
            L   D+S N  TG +P   L   K M   +   +N +     + L      + I L+     G+  +  +      T+D S N   G I  EV   ++ + SLN+S N+ +G IP S  N+T L SLDLSSN L G IP                   +G +P    F         GN  LCG
Sbjct:  601 LNTFDISDNLLTGTIPGELLASLKNMQLYLNFSNNLLTGTIPKELGKLEMVQEIDLSNNLFSGSIPRSLQACKNVFTLDFSQNNLSGHIPDEVFQGMDMIISLNLSRNSFSGEIPQSFGNMTHLVSLDLSSNNLTGEIPESLANLSTLKHLKLASNNLKGHVPESGVFKNINASDLMGNTDLCG 784          
BLAST of CX295851 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11
Identity = 53/185 (28.65%), Postives = 79/185 (42.70%), Query Frame = 2
Query:   44 RIIDLSYNQFTGVLPIWYLNGFKAMMRRDDNSIEVNYMRSLNYSYYESISLTMKGNDI-----QMERILTTFATIDLSSNRFQGEISEVLGKLNSLKSLNISHNNLTGGIPSSLRNLTELESLDLSSNKLAGRIPTQXXXXXXXXXXXXXXXXXEGPIPGG-------PQFNTFGIDSYSGNVGL 562
            +I+D+SYNQ TG +P                          N  + +  +L+++GN +     ++  ++   A +DLS N   G I  +LG L+    L +  N LTG IPS L N++ L  L L+ NKL G IP +                  GPIP          QFN  G +  SG++ L
Sbjct:  242 QILDISYNQITGEIPY-------------------------NIGFLQVATLSLQGNRLTGRIPEVIGLMQALAVLDLSDNELVGPIPPILGNLSFTGKLYLHGNMLTGPIPSELGNMSRLSYLQLNDNKLVGTIPPELGKLEQLFELNLANNRLVGPIPSNISSCAALNQFNVHG-NLLSGSIPL 400          
BLAST of CX295851 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11
Identity = 64/192 (33.33%), Postives = 92/192 (47.92%), Query Frame = 2
Query:  167 NYSYYESISLTMKGNDIQMERILTTFATID---LSSNRFQGEISEVLGKLNSLKSLNISHNNLTGGIPSSLRNLTELESLDLSSNKLAGRIPTQXXXXXXXXXXXXXXXXXEGPIPGGPQFNTFGIDSYSGNVGLCGFPLSKICRIDEAPEPTTPTG-------FIEGDDASSWFDWKLAMLGYASGVVIGC 712
            N +   ++SL +      + + L+T + +    L  NRF GEI EVL  L+ L  LN++ N+ TG I S   NLT+L++L L +N+L+G IP                    G IP   Q   F  DS+     LCG PL K+C  DE   P+ PT         +EG +     + KL+  G  +G+VIGC
Sbjct:   95 NLTQLRTLSLRLNALSGSLPKDLSTSSNLRHLYLQGNRFSGEIPEVLFSLSHLVRLNLASNSFTGEISSGFTNLTKLKTLFLENNQLSGSIP---DLDLPLVQFNVSNNSLNGSIPKNLQ--RFESDSFL-QTSLCGKPL-KLCP-DEETVPSQPTSGGNRTPPSVEGSEEKKKKN-KLSG-GAIAGIVIGC 276          
BLAST of CX295851 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 44/128 (34.38%), Postives = 60/128 (46.88%), Query Frame = 2
Query:  233 LTTFATIDLSSNRFQGEISEVLGKLNSLKSLNISHNNLTGGIPSSLRNLTELESLDLSSNKLAGRIPTQXXXXXXXXXXXXXXXXXEGPIPGGPQFNTFGIDSYSGNVGLCGFPLSKICRIDEAPEPT 616
            LT   ++ L  N F GE      +LN+L  L+IS NN TG IP S+ NLT L  L L +N  +G +P+                   G IP     + F  +S++GNV LCG PL        +P P+
Sbjct:  114 LTHLRSLYLQHNEFSGEFPTSFTQLNNLIRLDISSNNFTGSIPFSVNNLTHLTGLFLGNNGFSGNLPS---ISLGLVDFNVSNNNLNGSIPS--SLSRFSAESFTGNVDLCGGPLKPCKSFFVSPSPS 236          
BLAST of CX295851 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11
Identity = 44/131 (33.59%), Postives = 67/131 (51.15%), Query Frame = 2
Query:  191 SLTMKGNDIQMERILTTFATIDLSSNRFQGEI-SEVLGKLNSLKSLNISHNNLTGGIPSSLRNLTELESLDLSSNKLAGRIPTQXXXXXXXXXXXXXXXXXEGPIPGGPQFNTFGIDSYSGNVGLCGFPLS 580
            S+ + G   +  ++  +  ++DLS N F G I S++   L  L +L++S N L+G IPS + +   L SL L+ NKL G IP++                  G IP   + + +G D + GN GLCG PLS
Sbjct:   74 SMQLSGQIPESLKLCRSLQSLDLSFNDFSGLIPSQICSWLPYLVTLDLSGNKLSGSIPSQIVDCKFLNSLALNQNKLTGSIPSELTRLNRLQRLSLADNDLSGSIPS--ELSHYGEDGFRGNGGLCGKPLS 202          
BLAST of CX295851 vs. ExPASy Swiss-Prot
Match: DR100_ARATH (DNA-damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana GN=DRT100 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 58/185 (31.35%), Postives = 80/185 (43.24%), Query Frame = 2
Query:   38 KLRIIDLSYNQFTGVLPIWYLN-GFKAMMRRDDNSIEVNYMRSLNYSYYESISLTMKGNDIQMERILTTFATIDLSSNRFQGEISEVLGKLNSLKSLNISHNNLTGGIPSSLRNLTELESLDLSSNKLAGRIPTQXXXXXXXXXXXXXXXXXEGPIPGGPQFNTFGIDSYSGNVGLCGFPLSKIC 589
            +L  +DLS N   G +P W  N    +++  D NS+      SL         L+  G D+            +LS N  +G I +V G    L SL++SHN+L+G IP SL +   +  LD+S NKL GRIPT                        G  F+     S+S N  LCG PL+  C
Sbjct:  232 RLADLDLSKNHIEGPIPEWMGNMKVLSLLNLDCNSLTGPIPGSL---------LSNSGLDVA-----------NLSRNALEGTIPDVFGSKTYLVSLDLSHNSLSGRIPDSLSSAKFVGHLDISHNKLCGRIPT------------------------GFPFDHLEATSFSDNQCLCGGPLTTSC 372          
The following BLAST results are available for this feature:
BLAST of CX295851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
EXS_ARATH1.661e-1230.89Leucine-rich repeat receptor protein kinase EXS OS... [more]
CLV1_ARATH2.169e-1229.78Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
ERECT_ARATH1.076e-1127.67LRR receptor-like serine/threonine-protein kinase ... [more]
Y2579_ARATH1.406e-1130.56Probably inactive leucine-rich repeat receptor-lik... [more]
FLS2_ARATH1.406e-1132.89LRR receptor-like serine/threonine-protein kinase ... [more]
ERL1_ARATH1.406e-1128.65LRR receptor-like serine/threonine-protein kinase ... [more]
Y1848_ARATH1.836e-1133.33Probable inactive receptor kinase At1g48480 OS=Ara... [more]
Y2267_ARATH2.398e-1134.38Probable inactive receptor kinase At2g26730 OS=Ara... [more]
Y1699_ARATH3.132e-1133.59Probable LRR receptor-like serine/threonine-protei... [more]
DR100_ARATH4.090e-1131.35DNA-damage-repair/toleration protein DRT100 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC05076E10SK DroRLeaf1 Citrus clementina cDNA clone C05076E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295851 ID=CX295851; Name=CX295851; organism=Citrus clementina; type=EST; length=735bp
GTCCCATTGGTGATCCAAAACAAGAGTTCCTTTCCCCAAGTTGCGAATAA
TTGATCTCTCTTACAATCAATTCACCGGTGTTTTGCCAATATGGTATTTG
AATGGTTTTAAAGCCATGATGCGCAGGGATGACAATAGTATTGAAGTCAA
TTATATGAGGTCGTTGAATTATTCTTACTATGAATCAATATCTCTGACTA
TGAAAGGCAATGACATACAAATGGAGAGGATTTTAACCACTTTTGCAACT
ATTGATTTGTCGAGCAACAGATTTCAAGGGGAAATATCAGAAGTGTTGGG
AAAGCTTAATTCACTCAAAAGTCTCAACATTTCTCACAACAACCTGACAG
GTGGTATTCCATCGTCGCTAAGAAATCTAACAGAGCTTGAATCTCTAGAC
CTCTCTTCAAACAAGCTTGCTGGACGTATCCCAACACAACTGGCGAGTCT
CAATTATCTTTCGGTGTTGAATCTTTCGAACAACCAGCTCGAGGGACCCA
TACCAGGAGGACCCCAATTTAATACATTTGGAATTGATTCCTATTCTGGT
AACGTGGGGCTGTGTGGATTCCCATTATCAAAAATCTGCAGGATTGATGA
GGCACCAGAACCAACAACACCAACAGGATTTATCGAAGGAGACGACGCTT
CAAGCTGGTTTGATTGGAAGCTCGCTATGTTGGGTTACGCATCTGGAGTG
GTGATCGGCTGTCCATCGGATACATGGCATTTGTG
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