CX295852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_SOYBN (Superoxide dismutase [Fe], chloroplastic OS=Glycine max GN=SODB PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.181e-47 Identity = 87/139 (62.59%), Postives = 99/139 (71.22%), Query Frame = 1 Query: 244 KTGGRISAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWL 660 K G +++AKFELKPPPYPLN LEP MS+ TLEFHWGKHH+ YV+NL KQ+VGTEL DGKSLE++++ SYNKGD+LPAFNNAAQ WNHDFFW LIERDFGS TQFGSGWAWL Sbjct: 18 KEGPKVNAKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHKTYVENLKKQVVGTEL-DGKSLEEIIVTSYNKGDILPAFNNAAQVWNHDFFWECMKPGGGGKPSGELLELIERDFGSFVKFLDEFKAAAATQFGSGWAWL 155
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_NICPL (Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana plumbaginifolia GN=SODB PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.942e-44 Identity = 85/135 (62.96%), Postives = 93/135 (68.89%), Query Frame = 1 Query: 268 KFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVSKP 672 KFEL+PPPYP++ALEPHMS T EFHWGKHHRAYVDNLNKQI GTEL DGK+LED+++ +YNKG LPAFNNAAQAWNH FFW LI RDFGS TQFGSGWAWL KP Sbjct: 1 KFELQPPPYPMDALEPHMSSRTFEFHWGKHHRAYVDNLNKQIDGTEL-DGKTLEDIILVTYNKGAPLPAFNNAAQAWNHQFFWESMKPNGGGEPSGELLELINRDFGSYDAFVKEFKAAAATQFGSGWAWLAYKP 134
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_ARATH (Superoxide dismutase [Fe], chloroplastic OS=Arabidopsis thaliana GN=SODB PE=1 SV=4) HSP 1 Score: 168.318 bits (425), Expect = 3.428e-41 Identity = 78/134 (58.21%), Postives = 93/134 (69.40%), Query Frame = 1 Query: 259 ISAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWL 660 ++A + LKPPP+ L+ALEPHMSK TLEFHWGKHHRAYVDNL KQ++GTEL +GK LE ++ ++YN GDLLPAFNNAAQAWNH+FFW L+ERDF S TQFG+GWAWL Sbjct: 7 VTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTEL-EGKPLEHIIHSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEEFNAAAATQFGAGWAWL 139
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_ANASP (Superoxide dismutase [Fe] OS=Anabaena sp. (strain PCC 7120) GN=sodB PE=3 SV=3) HSP 1 Score: 117.472 bits (293), Expect = 6.939e-26 Identity = 61/132 (46.21%), Postives = 73/132 (55.30%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPH-MSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 F +P PY NALE + M +T E+H+GKHH+AYVDNLNK GTEL D KSLE+V+ ++ FNNAAQ WNH FFW I +DFGS TQFGSGWAWL+ Sbjct: 3 FVQEPLPYDFNALEQYGMKGETFEYHYGKHHKAYVDNLNKLTDGTELAD-KSLEEVIQIAFKDASKAGIFNNAAQVWNHTFFWNSLKPAGGGAPTGEFAAKINQDFGSFDKLKEEFSNAAATQFGSGWAWLI 133
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_SYNY3 (Superoxide dismutase [Fe] OS=Synechocystis sp. (strain PCC 6803) GN=sodB PE=1 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 2.915e-24 Identity = 58/125 (46.40%), Postives = 66/125 (52.80%), Query Frame = 1 Query: 289 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 PY ALEP +SK TLEFH KHH AYV+N N + GT+L D +S+EDV+ A FNNAAQAWNH F+W I DFGS TQFGSGWAWLV Sbjct: 9 PYDYTALEPCISKSTLEFHHDKHHAAYVNNFNNAVAGTDL-DNQSIEDVIKAVAGDASKAGIFNNAAQAWNHSFYWNCMKPGGGGQPSGALADKINADFGSFDAFVEAFKQAGATQFGSGWAWLV 132
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_LEGPH (Superoxide dismutase [Fe] OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=sodB PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.495e-24 Identity = 58/131 (44.27%), Postives = 73/131 (55.73%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 F L PY L+AL PH+SK+TLE+H+GKHH YV NLNK I GTE + +LE++++ + KG + FNNAAQ WNH F+W I + FGS T FGSGWAWLV Sbjct: 3 FTLPQLPYALDALAPHVSKETLEYHYGKHHNTYVTNLNKLIPGTEF-ESMTLEEIIMKA--KGGI---FNNAAQVWNHTFYWHSMSPNGGGEPKGRLAEAINKSFGSFAAFKEQFSQTAATTFGSGWAWLV 127
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_PLEBO (Superoxide dismutase [Fe] OS=Plectonema boryanum GN=sodB PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.108e-23 Identity = 57/132 (43.18%), Postives = 71/132 (53.79%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPH-MSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 F P P+P +ALEP+ M +T ++H+GKHH AYV NLNK + GT + + SLEDV+ S+ + FNNAAQ WNH FFW I+ FGS TQFGSGWAWLV Sbjct: 3 FTQPPLPFPKDALEPYGMKAETFDYHYGKHHAAYVTNLNKLVEGTPM-ESLSLEDVIKQSFGDSSKVGVFNNAAQVWNHTFFWNCLKAGGGGAPTGELAAKIDAAFGSLDKFKEEFSNAAATQFGSGWAWLV 133
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_PSEAE (Superoxide dismutase [Fe] OS=Pseudomonas aeruginosa GN=sodB PE=3 SV=3) HSP 1 Score: 109.383 bits (272), Expect = 1.890e-23 Identity = 61/133 (45.86%), Postives = 70/133 (52.63%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVSK 669 FEL P PY NALEPH+S +TLE+H KHH YV NLN I GTE +GKSLE++V +S G + FNNAAQ WNH F+W I FGS FGSGW WLV K Sbjct: 3 FELPPLPYEKNALEPHISAETLEYHHDKHHNTYVVNLNNLIPGTEF-EGKSLEEIVKSS--SGGI---FNNAAQVWNHTFYWNCLSPNGGGQPTGALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKK 129
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_COXBU (Superoxide dismutase [Fe] OS=Coxiella burnetii GN=sodB PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.223e-23 Identity = 59/131 (45.04%), Postives = 73/131 (55.73%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 FEL PY LNALEPH+S++TLE+H GKHHRAYV+ LNK I GT + + LE+++ S G + FNNAAQ WNH F+W I++ FGS FGSGWAWLV Sbjct: 3 FELPDLPYKLNALEPHISQETLEYHHGKHHRAYVNKLNKLIEGTPF-EKEPLEEIIRKS--DGGI---FNNAAQHWNHTFYWHCMSPDGGGDPSGELASAIDKTFGSLEKFKALFTDSANNHFGSGWAWLV 127
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_PSEPU (Superoxide dismutase [Fe] OS=Pseudomonas putida GN=sodB PE=1 SV=3) HSP 1 Score: 107.457 bits (267), Expect = 7.181e-23 Identity = 59/133 (44.36%), Postives = 70/133 (52.63%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVSK 669 FEL P PY +AL+PH+SK+TLEFH KHH YV NLN + GTE +GK+LE++V S G + FNNAAQ WNH F+W I FGS FGSGW WLV K Sbjct: 3 FELPPLPYAHDALQPHISKETLEFHHDKHHNTYVVNLNNLVPGTEF-EGKTLEEIVKTS--SGGI---FNNAAQVWNHTFYWNCLAPNAGGQPTGALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKK 129 The following BLAST results are available for this feature:
BLAST of CX295852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295852 ID=CX295852; Name=CX295852; organism=Citrus clementina; type=EST; length=692bpback to top |