CX295852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_PSEPK (Superoxide dismutase [Fe] OS=Pseudomonas putida (strain KT2440) GN=sodB PE=3 SV=3) HSP 1 Score: 106.686 bits (265), Expect = 1.225e-22 Identity = 58/133 (43.61%), Postives = 71/133 (53.38%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVSK 669 FEL P PY +AL+PH+SK+TLE+H KHH YV NLN + GTE +GK+LE++V +S G + FNNAAQ WNH F+W I FGS FGSGW WLV K Sbjct: 3 FELPPLPYAHDALQPHISKETLEYHHDKHHNTYVVNLNNLVPGTEF-EGKTLEEIVKSS--SGGI---FNNAAQVWNHTFYWNCLSPNGGGQPTGALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKK 129
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_PHOLE (Superoxide dismutase [Fe] OS=Photobacterium leiognathi GN=sodB PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.600e-22 Identity = 55/131 (41.98%), Postives = 69/131 (52.67%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 FEL P+ +NALEPH+S++TLE+H+GKHH YV LN + GTEL + KSLE+++ S FNNAAQ WNH F+W IE+ FGS FGS W WLV Sbjct: 2 FELPALPFAMNALEPHISQETLEYHYGKHHNTYVVKLNGLVEGTELAE-KSLEEIIKTSTG-----GVFNNAAQVWNHTFYWNCLAPNAGGEPTGEVAAAIEKAFGSFAEFKAKFTDSAINNFGSSWTWLV 126
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_SYNE7 (Superoxide dismutase [Fe] OS=Synechococcus elongatus (strain PCC 7942) GN=sodB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.729e-22 Identity = 55/131 (41.98%), Postives = 68/131 (51.91%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 +EL P+ AL P+++K+TLEFH KHH AYV+N N + T+L DG+ +E V+ A FNNAAQAWNH F+W I DFGS TQFGSGWAWLV Sbjct: 3 YELPALPFDYTALAPYITKETLEFHHDKHHAAYVNNYNNAVKDTDL-DGQPIEAVIKAIAGDASKAGLFNNAAQAWNHSFYWNSIKPNGGGAPTGALADKIAADFGSFENFVTEFKQAAATQFGSGWAWLV 132
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_SALTY (Superoxide dismutase [Fe] OS=Salmonella typhimurium GN=sodB PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 6.079e-22 Identity = 57/131 (43.51%), Postives = 69/131 (52.67%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 FEL PY +AL PH+S +TLE+H+GKHH+ YV NLN I GT +GKSLE++V S +G + FNNAAQ WNH F+W I FGS FGSGW WLV Sbjct: 3 FELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIVRTS--EGGI---FNNAAQVWNHTFYWNCLAPNAGGEPTGKLADAIAASFGSFAEFKAQFTDAAIKNFGSGWTWLV 127
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_SALTI (Superoxide dismutase [Fe] OS=Salmonella typhi GN=sodB PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 6.079e-22 Identity = 57/131 (43.51%), Postives = 69/131 (52.67%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 FEL PY +AL PH+S +TLE+H+GKHH+ YV NLN I GT +GKSLE++V S +G + FNNAAQ WNH F+W I FGS FGSGW WLV Sbjct: 3 FELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIVRTS--EGGI---FNNAAQVWNHTFYWNCLAPNAGGEPTGKLADAIAASFGSFAEFKAQFTDAAIKNFGSGWTWLV 127
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_SHIFL (Superoxide dismutase [Fe] OS=Shigella flexneri GN=sodB PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.354e-21 Identity = 54/131 (41.22%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 FEL PY +AL PH+S +T+E+H+GKHH+ YV NLN I GT +GKSLE+++ +S FNNAAQ WNH F+W I FGS FGSGW WLV Sbjct: 3 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIIRSSEG-----GVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLV 127
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_ECOLI (Superoxide dismutase [Fe] OS=Escherichia coli (strain K12) GN=sodB PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.354e-21 Identity = 54/131 (41.22%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 FEL PY +AL PH+S +T+E+H+GKHH+ YV NLN I GT +GKSLE+++ +S FNNAAQ WNH F+W I FGS FGSGW WLV Sbjct: 3 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIIRSSEG-----GVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLV 127
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_ECOL6 (Superoxide dismutase [Fe] OS=Escherichia coli O6 GN=sodB PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.354e-21 Identity = 54/131 (41.22%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 FEL PY +AL PH+S +T+E+H+GKHH+ YV NLN I GT +GKSLE+++ +S FNNAAQ WNH F+W I FGS FGSGW WLV Sbjct: 3 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIIRSSEG-----GVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLV 127
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_ECO57 (Superoxide dismutase [Fe] OS=Escherichia coli O157:H7 GN=sodB PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.354e-21 Identity = 54/131 (41.22%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 FEL PY +AL PH+S +T+E+H+GKHH+ YV NLN I GT +GKSLE+++ +S FNNAAQ WNH F+W I FGS FGSGW WLV Sbjct: 3 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIIRSSEG-----GVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLV 127
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_BORPE (Superoxide dismutase [Fe] OS=Bordetella pertussis GN=sodB PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.310e-21 Identity = 56/131 (42.75%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 277 LKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVSK 669 L P PY L+AL P +SK+TLEFH+GKHH+ YV NLN I GTE + SLE++V S FNNAAQ WNH F+W I+ +GS FGSGW WLV K Sbjct: 5 LPPLPYALDALAPRISKETLEFHYGKHHQTYVTNLNNLIPGTEF-ENLSLEEIVKKSSG-----GVFNNAAQVWNHTFYWNSLSPNGGGEPSGALADAIKAKWGSVDAFKEAFNKSAAGNFGSGWTWLVKK 129 The following BLAST results are available for this feature:
BLAST of CX295852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295852 ID=CX295852; Name=CX295852; organism=Citrus clementina; type=EST; length=692bpback to top |