CX295852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODM_BACST (Superoxide dismutase [Mn] OS=Bacillus stearothermophilus GN=sodA PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.198e-15 Identity = 46/133 (34.59%), Postives = 59/133 (44.36%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 FEL PYP +ALEPH+ K+T+ H KHH YV NLN + G KSLE+++ + + + NN NH FW I + FGS +FGSGWAWLV Sbjct: 3 FELPALPYPYDALEPHIDKETMNIHHTKHHNTYVTNLNAALEGHPDLQNKSLEELLSNLEALPESIRTAVRNNGGGHANHSLFWTILSPNGGGEPTGELADAINKKFGSFTAFKDEFSKAAAGRFGSGWAWLV 135
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODM_BACCA (Superoxide dismutase [Mn] OS=Bacillus caldotenax GN=sodA PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.198e-15 Identity = 46/133 (34.59%), Postives = 59/133 (44.36%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 FEL PYP +ALEPH+ K+T+ H KHH YV NLN + G KSLE+++ + + + NN NH FW I + FGS +FGSGWAWLV Sbjct: 3 FELPALPYPYDALEPHIDKETMNIHHTKHHNTYVTNLNAALEGHPDLQNKSLEELLSNLEALPESIRTAVRNNGGGHANHSLFWTILSPNGGGEPTGELAEAINKKFGSFTAFKDEFSKAAAGRFGSGWAWLV 135
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODM_STAXY (Superoxide dismutase [Mn/Fe] OS=Staphylococcus xylosus GN=sodA PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 47/133 (35.34%), Postives = 62/133 (46.62%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 FEL PY +ALEPH+ + T+E H GKHH YV LN + GT+L + KS+E++V + S + NN NH FW I+ +GS +FGSGWAWLV Sbjct: 3 FELPNLPYGFDALEPHIDQQTMEIHHGKHHNTYVTKLNAAVEGTDL-ESKSIEEIVANLDSVPENIQTAVRNNGGGHLNHSLFWELLTPNSEEKGTVVDK--IKEQWGSLDAFKEEFADKAAARFGSGWAWLV 132
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_CAMJJ (Superoxide dismutase [Fe] OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=sodB PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 50/138 (36.23%), Postives = 63/138 (45.65%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL-------IERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 FEL+ PY NA +S +T +H GKHH YV NLN I TE GK L ++ S N G FNNAAQ +NHDF++ + +E++FGS FGSGW WLV Sbjct: 2 FELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIKDTEFA-GKDLVSIIKTS-NGG----VFNNAAQVYNHDFYFDCIKPSTGCGCGGSCQSIDANLQAALEKEFGSLENFKAEFIKGATGVFGSGWFWLV 133
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_CAMJE (Superoxide dismutase [Fe] OS=Campylobacter jejuni GN=sodB PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 50/138 (36.23%), Postives = 63/138 (45.65%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL-------IERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 FEL+ PY NA +S +T +H GKHH YV NLN I TE GK L ++ S N G FNNAAQ +NHDF++ + +E++FGS FGSGW WLV Sbjct: 2 FELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIKDTEFA-GKDLVSIIKTS-NGG----VFNNAAQVYNHDFYFDCIKPSTGCGCGGSCQSIDANLQAALEKEFGSLENFKAEFIKGATGVFGSGWFWLV 133
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODM_BACHD (Superoxide dismutase [Mn] OS=Bacillus halodurans GN=sodA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.094e-14 Identity = 46/133 (34.59%), Postives = 57/133 (42.86%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 FEL PYP NALEPH+ + T+ H GKHH YV LN + G KS+E +V + + + NN NH FW I +FGS +FGSGWAWLV Sbjct: 3 FELPKLPYPANALEPHIDEATMNIHHGKHHNTYVTKLNAALEGHSALAEKSIEALVSDLDAVPENIRTAVRNNGGGHANHTLFWQILSPNGGGAPTGELADAINAEFGSFDQFKEKFADAAANRFGSGWAWLV 135
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODM_STAEP (Superoxide dismutase [Mn/Fe] OS=Staphylococcus epidermidis GN=sodA PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.735e-14 Identity = 47/133 (35.34%), Postives = 61/133 (45.86%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 FEL PY +ALEPH+ K+T+E H KHH YV LN + GT+L + KS+E++V + S NN NH FW I+ +GS +FGSGWAWLV Sbjct: 3 FELPKLPYAFDALEPHIDKETMEIHHDKHHNTYVTKLNAVVEGTDL-EAKSIEEIVANLDSVPSDIQTAVRNNGGGHLNHSLFWELLTPNSEEKGEVVEK--IKEQWGSLDEFKKEFADKAAARFGSGWAWLV 132
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODM1_BACCR (Superoxide dismutase [Mn] 1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=sodA1 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.735e-14 Identity = 49/131 (37.40%), Postives = 60/131 (45.80%), Query Frame = 1 Query: 289 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-TELGDGKSLEDVVIASYNKGDLLPAF-----NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 PY +ALEPH K+T+ H KHH Y+ NLN + G EL D KS+E++V N ++ A NN NH FFW IE FGS T+FGSGWAWLV Sbjct: 25 PYAYDALEPHFDKETMNIHHTKHHNTYITNLNAALEGHAELAD-KSVEELVA---NLNEVPEAIRTAVRNNGGGHANHTFFWTILSPNGGGQPVGELATAIEAKFGSFDAFKEEFAKAGATRFGSGWAWLV 151
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODM_STAS1 (Superoxide dismutase [Mn/Fe] OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=sodA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.572e-14 Identity = 47/133 (35.34%), Postives = 61/133 (45.86%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 FEL PY +ALEPH+ K T+E H KHH YV LN + GT+L + KS+E++V + S + NN NH FW I+ +GS +FGSGWAWLV Sbjct: 3 FELPNLPYGFDALEPHIDKQTMEIHHDKHHNTYVTKLNAAVEGTDL-ESKSIEEIVANLDSVPENIQTAVRNNGGGHLNHSLFWELLTPNSEEKGTVVDK--IKEQWGSLDAFKEEFADKAAARFGSGWAWLV 132
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODM_STAHJ (Superoxide dismutase [Mn/Fe] OS=Staphylococcus haemolyticus (strain JCSC1435) GN=sodA PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.572e-14 Identity = 47/133 (35.34%), Postives = 61/133 (45.86%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 FEL PY +ALEPH+ K T+E H KHH YV LN + GT+L + KS+E++V + S + NN NH FW I+ +GS +FGSGWAWLV Sbjct: 3 FELPNLPYATDALEPHIDKQTMEIHHDKHHNTYVTKLNSAVEGTDL-ESKSIEEIVANLDSVPEDIQTAVRNNGGGHLNHSLFWELLTPNSEEKGTVVDK--IKEQWGSLDEFKKEFADKAAARFGSGWAWLV 132 The following BLAST results are available for this feature:
BLAST of CX295852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295852 ID=CX295852; Name=CX295852; organism=Citrus clementina; type=EST; length=692bpback to top |