CX295852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODM1_STAAC (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain COL) GN=sodA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14 Identity = 46/133 (34.59%), Postives = 60/133 (45.11%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 FEL PY +ALEPH K+T+E H +HH YV LN + GT+L + KS+E++V + S NN NH FW I+ +GS +FGSGWAWLV Sbjct: 3 FELPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDL-ESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEK--IKEQWGSLEEFKKEFADKAAARFGSGWAWLV 132
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODM1_STAAB (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=sodA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14 Identity = 46/133 (34.59%), Postives = 60/133 (45.11%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 FEL PY +ALEPH K+T+E H +HH YV LN + GT+L + KS+E++V + S NN NH FW I+ +GS +FGSGWAWLV Sbjct: 3 FELPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDL-ESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEK--IKEQWGSLEEFKKEFADKAAARFGSGWAWLV 132
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODM1_STAA8 (Superoxide dismutase [Mn] 1 OS=Staphylococcus aureus (strain NCTC 8325) GN=sodA PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14 Identity = 46/133 (34.59%), Postives = 60/133 (45.11%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 FEL PY +ALEPH K+T+E H +HH YV LN + GT+L + KS+E++V + S NN NH FW I+ +GS +FGSGWAWLV Sbjct: 3 FELPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDL-ESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEK--IKEQWGSLEEFKKEFADKAAARFGSGWAWLV 132
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODM1_STAA3 (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain USA300) GN=sodA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14 Identity = 46/133 (34.59%), Postives = 60/133 (45.11%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 663 FEL PY +ALEPH K+T+E H +HH YV LN + GT+L + KS+E++V + S NN NH FW I+ +GS +FGSGWAWLV Sbjct: 3 FELPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDL-ESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEK--IKEQWGSLEEFKKEFADKAAARFGSGWAWLV 132
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODM_SALTY (Superoxide dismutase [Mn] OS=Salmonella typhimurium GN=sodA PE=3 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13 Identity = 49/139 (35.25%), Postives = 61/139 (43.88%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPA------FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVSK 669 + L PY +ALEPH K T+E H KHH+ YV+N N + +E+++ K D +PA NNA NH FW IERDFGS T+FGSGWAWLV K Sbjct: 3 YTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALENLPEFASLPVEELI----TKLDQVPADKKTVLRNNAGGHANHSLFW--KGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAATRFGSGWAWLVLK 135
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODF_HELPJ (Superoxide dismutase [Fe] OS=Helicobacter pylori J99 GN=sodB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13 Identity = 45/129 (34.88%), Postives = 61/129 (47.29%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAW 657 F L+ P+ +++ +S +FH GKHH+ YV+NLN I GT+ KS ++ + G FNNAAQ +NHDF+W L E+DFGS T FGSGW W Sbjct: 2 FTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIKGTDF--EKSSLFAILTKSSGG----VFNNAAQIYNHDFYWDCLSPKATALSDELKEAL-EKDFGSLEKFKEDFIKSATTLFGSGWNW 123
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODM_SHIFL (Superoxide dismutase [Mn] OS=Shigella flexneri GN=sodA PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13 Identity = 49/139 (35.25%), Postives = 61/139 (43.88%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPA------FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVSK 669 + L PY +ALEPH K T+E H KHH+ YV+N N + +E+++ K D LPA NNA NH FW IERDFGS ++FGSGWAWLV K Sbjct: 3 YTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELI----TKLDQLPADKKTVLRNNAGGHANHSLFW--KGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLK 135
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODM_SALTI (Superoxide dismutase [Mn] OS=Salmonella typhi GN=sodA PE=3 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13 Identity = 49/139 (35.25%), Postives = 61/139 (43.88%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPA------FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVSK 669 + L PY +ALEPH K T+E H KHH+ YV+N N + +E+++ K D +PA NNA NH FW IERDFGS T+FGSGWAWLV K Sbjct: 3 YTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALENLPEFADLPVEELI----TKLDQVPADKKTVLRNNAGGHANHSLFW--KGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAATRFGSGWAWLVLK 135
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODM_ECOLI (Superoxide dismutase [Mn] OS=Escherichia coli (strain K12) GN=sodA PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13 Identity = 49/139 (35.25%), Postives = 61/139 (43.88%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPA------FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVSK 669 + L PY +ALEPH K T+E H KHH+ YV+N N + +E+++ K D LPA NNA NH FW IERDFGS ++FGSGWAWLV K Sbjct: 3 YTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELI----TKLDQLPADKKTVLRNNAGGHANHSLFW--KGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLK 135
BLAST of CX295852 vs. ExPASy Swiss-Prot
Match: SODM_ECO57 (Superoxide dismutase [Mn] OS=Escherichia coli O157:H7 GN=sodA PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13 Identity = 49/139 (35.25%), Postives = 61/139 (43.88%), Query Frame = 1 Query: 271 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPA------FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVSK 669 + L PY +ALEPH K T+E H KHH+ YV+N N + +E+++ K D LPA NNA NH FW IERDFGS ++FGSGWAWLV K Sbjct: 3 YTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELI----TKLDQLPADKKTVLRNNAGGHANHSLFW--KGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLK 135 The following BLAST results are available for this feature:
BLAST of CX295852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295852 ID=CX295852; Name=CX295852; organism=Citrus clementina; type=EST; length=692bpback to top |