CX295854
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_HALOH (Serine hydroxymethyltransferase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=glyA PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.040e-44 Identity = 95/200 (47.50%), Postives = 126/200 (63.00%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A+ + DMAHI+GLVAAG+ PSP AD VTTTTHK+LRG RG +I + ++ +KI++A+FPGLQGGP H I AV K+A E+K YQ+Q++SN A L G+ LVSGGT+NHL+LV+L N I G E L+ V I NKNT+P + S V GIR+GTPA+T+RG E++ +A Sbjct: 192 ALFMVDMAHIAGLVAAGLHPSPVPVADFVTTTTHKTLRGTRGGLILCKG--------------EHAKKIDKAIFPGLQGGPLLHIIAAKAVTFKEALQDEFKGYQKQIVSNAKTMAAELKNYGFRLVSGGTDNHLMLVDLTNMDITGKDAETALDKVGITVNKNTIPFEKRSPFVTSGIRIGTPAVTTRGMKEKEMKLIA 377
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_GEOTN (Serine hydroxymethyltransferase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=glyA PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.040e-44 Identity = 92/208 (44.23%), Postives = 134/208 (64.42%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 625 A ++ DMAHI+GLVAAG+ P+P YA VTTTTHK+LRGPRG MI ++ + ++I++++FPG+QGGP H I AVAL +A ++K Y ++++ N + A L + G+ LVSGGT+NHL+LV+L+ +++ G EKVL+ V I NKNT+P D S V GIR+GT A+T+RGF E+ ++A +K Sbjct: 192 AYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILCQE--------------QFAKQIDKSIFPGIQGGPLMHVIAAKAVALGEALQDDFKVYAKRIIDNAQRLAAALQKEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIASLIGLVLK 385
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_DESAH (Serine hydroxymethyltransferase OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=glyA PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.040e-44 Identity = 97/208 (46.63%), Postives = 128/208 (61.54%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 625 A+ + DMAHI+GLVAAGV PSP +AD+VTTTTHK+LRGPRG +I N+ G KI+ +FPG+QGGP H I AVALK+A +P + YQ QV++N + A L++ G +LVS GT+NHL+L+NL + I G E L A I NKN VP D M+ GIR+GTP +T+RG E + VA A++ Sbjct: 194 ALFMVDMAHIAGLVAAGVHPSPVPHADIVTTTTHKTLRGPRGGLIL------SSNEIGP--------KISSQIFPGIQGGPLMHVIAAKAVALKEALSPSFAQYQRQVVANAATLADALMDRGMKLVSNGTDNHLMLLNLTHNGISGKDAENRLGAAGITVNKNAVPNDPRGPMITSGIRIGTPLVTTRGMGETEMDLVAELITQALE 387
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_CHLTE (Serine hydroxymethyltransferase OS=Chlorobium tepidum GN=glyA PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.040e-44 Identity = 95/215 (44.19%), Postives = 128/215 (59.53%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKE-----INKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVP-GDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLA 631 A+++AD+AH +GLVAAG+ +P + VTTTTHK+LRGPRG MI K + IN + E I+ V PG+QGGP H I G AVA +A PE+KAY +Q+ N + A L GY +VSGGT+NHL+L++L+NK ++G E +L I NKN VP D S V GIR+GTPA+T+RG + K+ F D + A Sbjct: 194 ALLMADIAHPAGLVAAGLSANPMPHCHFVTTTTHKTLRGPRGGMIMMGKDFENPLGLTINTKNGSRVKMMSEVIDAEVMPGIQGGPLMHIIAGKAVAFGEALQPEFKAYAQQIKDNAAAMAAKFLAAGYHIVSGGTKNHLMLLDLRNKNVNGKVAENLLHEAGITVNKNMVPFDDKSPFVTSGIRIGTPAMTTRGMKVAEAEKIVEFIDRVISAA 408
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_CAMHC (Serine hydroxymethyltransferase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=glyA PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.040e-44 Identity = 92/200 (46.00%), Postives = 124/200 (62.00%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A + AD+AHI+GLV AG +PF Y VV++TTHK+LRGPRG +I + ++ +KIN ++FPG+QGGP H I G AV K +PE+K Y +QV +NC TL++ G++LVSGGT+NHL+LV+ K G LE I NKNTVPG+ S V GIR+G+ ALTSRG E++F +A Sbjct: 191 AFLFADVAHIAGLVVAGEHTNPFPYCHVVSSTTHKTLRGPRGGIIMTNEE-------------EFAKKINSSIFPGMQGGPLVHVIAGKAVGFKHNLSPEWKTYAKQVKANCKILGDTLMKRGFDLVSGGTDNHLILVSFLKKDYSGKDASNALENAGITVNKNTVPGETRSPFVTSGIRVGSAALTSRGMKEKEFEWIA 377
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA1_RHIME (Serine hydroxymethyltransferase 1 OS=Rhizobium meliloti GN=glyA1 PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.040e-44 Identity = 102/218 (46.79%), Postives = 130/218 (59.63%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSENS 655 A ++ DMAHI+GLVA G PSPF + V TTTTHKSLRGPRG MI +EI K KIN AVFPGLQGGP H I AVAL +A P +K Y QV+ N A+TL G ++VSGGT+NHL+LV+L+ K G R E L ++ NKN +P D V G+R+G PA T+RGF E +F +V + V++ +K+ NS Sbjct: 202 AWLMVDMAHIAGLVAGGQHPSPFPHCHVATTTTHKSLRGPRGGMILTND--EEIAK-----------KINSAVFPGLQGGPLMHVIAAKAVALGEALQPSFKDYAAQVVKNARTLAETLKANGLDIVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYVTCNKNGIPFDPEKPFVTSGVRLGAPAGTTRGFKEAEFKEVG---ELIVEVLDGLKAANS 403
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_SYNR3 (Serine hydroxymethyltransferase OS=Synechococcus sp. (strain RCC307) GN=glyA PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.050e-43 Identity = 95/200 (47.50%), Postives = 128/200 (64.00%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A +LADMAHI+GLVAAGV PSP + VVTTTTHK+LRGPRG +I D+ ++ ++AVFPG QGGP H + AVA +A P +K Y +QV++N A+ L E G +VSGGT+NH+VL++L+ + G + ++ V+I ANKNTVP D S V G+R+GT ALT+RGF E F++VA Sbjct: 195 AYLLADMAHIAGLVAAGVHPSPVPHCHVVTTTTHKTLRGPRGGLILCNDA-------------DFAKQFDKAVFPGTQGGPLEHVVAAKAVAFGEALQPSFKQYSQQVVANAQALAERLQERGIAVVSGGTDNHVVLLDLRGIGMTGKVADLLVSEVNITANKNTVPFDPESPFVTSGLRLGTAALTTRGFDEAAFSEVA 381
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_NITOC (Serine hydroxymethyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=glyA PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.050e-43 Identity = 90/200 (45.00%), Postives = 128/200 (64.00%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A +LAD+AH++G++AAG+ P+P + ADV T+TTHK+LRGPR +I + K E+ E+K+N VFPG+QGGP H + AVA K+A P +K YQ QV+ N A+ + GY++VSGGT++HL LV+L K + G + L +I NKNTVP D S V GIR+G+PA+T+RGF E + ++A Sbjct: 196 AYLLADIAHLAGMIAAGIYPNPVQIADVTTSTTHKTLRGPRSGLI--------LAKANPEI----EKKLNSKVFPGIQGGPLMHVVAAKAVAFKEAMEPAFKDYQRQVIRNAQAMAEAIQSRGYKIVSGGTDSHLFLVDLVAKGLTGKAADAALGRANITVNKNTVPNDPQSPFVTSGIRIGSPAMTTRGFKEAEICELA 383
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_LACPL (Serine hydroxymethyltransferase OS=Lactobacillus plantarum GN=glyA PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.050e-43 Identity = 90/201 (44.78%), Postives = 129/201 (64.18%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMG-YELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A+++ DMAHI+GLVAAG+ P+P YADVVTTTTHK+LRGPRG MI ++ Y +KIN AVFPG QGGP +H I G A+AL + PE+K Y + ++ N A+ + ++SGGT+NHL+ +++ ++G +V+ +L+ V+I NK +P + + A GIR+GTPA+T+RGF E D KVA Sbjct: 191 ALLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTLRGPRGGMILAKE--------------KYGKKINSAVFPGNQGGPLDHVIAGKAIALGEDLQPEFKVYAQHIIDNAKAMAKVFNDSDLVRVISGGTDNHLMTIDVTKSGLNGRQVQDLLDTVYITVNKEAIPNETLGAFKTSGIRLGTPAITTRGFDEADATKVA 377
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA3_COLP3 (Serine hydroxymethyltransferase 3 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=glyA3 PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.050e-43 Identity = 100/218 (45.87%), Postives = 130/218 (59.63%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSENS 655 AI++ DMAHI+GLVAAG +P +ADVVTTTTHK+LRGPRG +I D +KIN AVFPGLQGGP H I AVAL + P + AY +QVLSN A TL + G ++V+ GT+ HL+LV+L+ K + G+ E+ LE I NKN +P D MV GIR+GTPA TSRGF ++F + + + V +NS Sbjct: 206 AILMVDMAHIAGLVAAGAHQNPLPFADVVTTTTHKTLRGPRGGLILTNNP-------------DVAKKINSAVFPGLQGGPLMHVIAAKAVALGEVLEPSFGAYIKQVLSNARVLASTLQQRGCDIVTDGTDTHLMLVDLRPKGLKGNTTEESLERAGITCNKNGIPFDSEKPMVTSGIRLGTPAGTSRGFGNDEFELIGQWIGDVLDGLVANPEDNS 410 The following BLAST results are available for this feature:
BLAST of CX295854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295854 ID=CX295854; Name=CX295854; organism=Citrus clementina; type=EST; length=729bpback to top |