CX295854
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_UNCTG (Serine hydroxymethyltransferase OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=glyA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.990e-43 Identity = 96/216 (44.44%), Postives = 134/216 (62.04%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSE 649 A ++DMAH +GLVAAG+ PSP YAD+ TTTTHK+LRGPRG +I +E+ K KIN A+FPG QGGP H I AVA +A PE+K YQ+QVL+N + A+TL E ++VSGGT++H+ LV+L+ + G + LE I NKN +P D+ + GIR+G+PA+T+RG E + K+A +A +K+ I +E Sbjct: 192 AYHMSDMAHYAGLVAAGIYPSPVGYADITTTTTHKTLRGPRGGLILTNN--EELAK-----------KINSAIFPGEQGGPLMHVIAAKAVAFGEALKPEFKEYQKQVLANAKQLAETLEEGKLKIVSGGTDSHMFLVDLRPLNVKGKNAQDTLEKAGITLNKNGIPYDLEKPTMTSGIRIGSPAVTTRGMKEPEMVKIA---EAIIKVLKNIDNE 391
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_ROSCS (Serine hydroxymethyltransferase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=glyA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.990e-43 Identity = 90/231 (38.96%), Postives = 139/231 (60.17%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVK-----EINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPG-DVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSENSGNKLKDFV 679 A + AD+AH +GL+A G++PSP YA VVT+TTHK+LRGPRG +I K + + K G+ + E +++ V PG+QGGP H I AV + PE++ Y Q++ N A L+ GY ++SGGT+NHL+L++L+NK + G ++ L+ I NKN VP D S ++ GIR+GTPALT+RG E + ++A D + I +++ N++++ V Sbjct: 195 AFLFADIAHPAGLIAKGLLPSPIPYAHVVTSTTHKTLRGPRGGIIMMGKDFENPFGLKAAKSGRTLMMS--ELLDKMVIPGVQGGPLMHVIAAKAVGFGENLQPEFETYARQIIRNAQTLAGALMARGYHILSGGTDNHLMLIDLRNKGVSGKAAQEALDRAAITTNKNAVPNDDKSPLITSGIRLGTPALTTRGMKEPEMEQIAALIDDVI---THINDDHTINRVREEV 420
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_RICTY (Serine hydroxymethyltransferase OS=Rickettsia typhi GN=glyA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.990e-43 Identity = 101/226 (44.69%), Postives = 132/226 (58.41%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEE---KINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSENSGNKLK 670 A ++AD+AHI+GLVA G SP YA VVT+TTHK+LRGPRG +I DYEE KIN A+FPGLQGGP H I AVA + PEYK Y +QV+SN A +L E GY++++GGT+NH+VLV+L+ I G L+ I NKN +P D S V GIR GT A T++GF E+DF + + A + +K +NS + K Sbjct: 196 AYLMADIAHIAGLVATGEHQSPIPYAHVVTSTTHKTLRGPRGGLILS----------------DYEEIGKKINSALFPGLQGGPLMHVIAAKAVAFLENLQPEYKCYIKQVISNAKALAISLQERGYDILTGGTDNHIVLVDLRKDGITGKCAANSLDRAGITCNKNAIPFDTTSPFVTSGIRFGTSACTTKGFKEKDFVLIGHMV-AEILDGLKNNEDNSKTEQK 404
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_RICPR (Serine hydroxymethyltransferase OS=Rickettsia prowazekii GN=glyA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.990e-43 Identity = 100/223 (44.84%), Postives = 133/223 (59.64%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSENSGNKLK 670 A ++AD+AHI+GLVA G SP YA VVT+TTHK+LRGPRG +I +EI K KIN A+FPGLQGGP H I AVA + PEYK Y +QV+SN A +L E GY++++GGT+NH+VLV+L+ I G L+ I NKN +P D S + GIR GTPA T++GF E+DF + + A + +K +NS + K Sbjct: 196 AYLMADIAHIAGLVATGEHQSPIPYAHVVTSTTHKTLRGPRGGLIL--SDDEEIGK-----------KINSALFPGLQGGPLMHIIAAKAVAFLENLQPEYKNYIKQVISNAKALAISLQERGYDILTGGTDNHIVLVDLRKDGITGKCAANSLDRAGITCNKNAIPFDTTSPFITSGIRFGTPACTTKGFKEKDFVLIGHMV-AEILDGLKHNEDNSKTEQK 404
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_FINM2 (Serine hydroxymethyltransferase OS=Finegoldia magna (strain ATCC 29328) GN=glyA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.990e-43 Identity = 92/208 (44.23%), Postives = 126/208 (60.58%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 625 A ++ DMAHI+GLVA G PSP YAD VTTTTHK+LRGPRG I ++ ++++ ++++VFPG QGGP H I AV K+ PE+K Y Q+L N + L+ LVSGGT+NHL+L++ ++ + G E VL V+I NKNT+P D + V GIR+GTPA+T+RG E + KVA F A+K Sbjct: 196 AYLMVDMAHIAGLVATGDHPSPVPYADFVTTTTHKTLRGPRGGAILCKE--------------EHKKLLDKSVFPGFQGGPLEHIIAAKAVCFKEDLQPEFKEYTHQILKNAKAMEKVFLDNDVRLVSGGTDNHLLLIDCRSFGMTGKEAENVLSEVNITTNKNTIPNDPETPFVTSGIRIGTPAITTRGLKEAEATKVAEFMIDALK 389
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_CAUSK (Serine hydroxymethyltransferase OS=Caulobacter sp. (strain K31) GN=glyA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.990e-43 Identity = 94/207 (45.41%), Postives = 121/207 (58.45%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAM-VPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 622 A ++ DMAH +GLVA GV PSP +A VVTTTTHK+LRGPRG M+ +K+N AVFPGLQGGP H I AVA +A P +KAY + V+ N A+ L G +VSGGT++HL+LV+L+ K + G E LE H+ NKN VP D ++ V GIR+GTPA T+RGF +F +V V Sbjct: 208 AYLMVDMAHFAGLVAGGVFPSPIPHAHVVTTTTHKTLRGPRGGMVLTNDEA-------------IIKKVNSAVFPGLQGGPLEHVIAAKAVAFGEALQPAFKAYAQAVIDNARALAEALQTQGVNIVSGGTDSHLMLVDLRPKGVTGRDAEHSLERAHMTCNKNGVPFDTASFAVTSGIRLGTPAGTTRGFGAAEFTRVGQLIGEVV 401
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_BORDL (Serine hydroxymethyltransferase OS=Borrelia duttonii (strain Ly) GN=glyA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.990e-43 Identity = 102/227 (44.93%), Postives = 134/227 (59.03%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKE-INKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSENSGNKLKDFV 679 A +L D+AH +GLVA G SP + A + T+TTHK+LRGPRG +I K IN KE D +N VFPG QGGP H I G AVA K+A E+K Y +V+ N A+ + G +VSGGT+NHL LV+L I G+ EK+LE+V+I NKN +P D + V GIR+G PA+TSRG +D KVA+F + A+K KS + K+K V Sbjct: 187 AYLLCDIAHTAGLVATGFHNSPIDVAHLTTSTTHKTLRGPRGGLILAGKEFNTMINYNNKERTLD--SAVNSCVFPGTQGGPLMHVIAGKAVAFKEALNKEFKDYISRVIENTKAMAEYFISEGLRIVSGGTDNHLFLVDLSGLGITGADAEKILESVNITLNKNAIPFDSKNPSVASGIRIGAPAITSRGLNRDDSIKVAHF----IIRALKTKSTDELRKIKQEV 407
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_BEII9 (Serine hydroxymethyltransferase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=glyA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.990e-43 Identity = 94/200 (47.00%), Postives = 120/200 (60.00%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A DMAH +GLVA G PSPF +A VVT+TTHK+LRGPRG ++ D +KIN AVFPGLQGGP H I AVA +A P+++ Y +QV+ N A L+E G+ + SGGT+NHL+LV+L+ K++ G E L I NKN VP D S V GIR+G+PA TSRGF ++F VA Sbjct: 208 AYFFVDMAHFAGLVAGGAHPSPFPHAHVVTSTTHKTLRGPRGGLVLTNDA-------------DIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALRPDFRLYAQQVVVNAGTLASRLVEKGFAISSGGTDNHLMLVDLRPKQLTGKAAEAALGRASITCNKNGVPFDTASPFVTSGIRLGSPAATSRGFGTKEFQDVA 394
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_BACP2 (Serine hydroxymethyltransferase OS=Bacillus pumilus (strain SAFR-032) GN=glyA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.990e-43 Identity = 95/228 (41.67%), Postives = 137/228 (60.09%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK-LAVKIKSENSGNKLKDFVA 682 A + DMAHI+GLVA G+ P+P YAD VTTTTHK+LRGPRG MI R+ ++ +KI++++FPG+QGGP H I+ AV+ + ++K Y + V+ N + A+TLL +LVSGGT+NHLVL++L++ I G E VL+ + I NKN +P D V G+R+GT A+TSRGF +E +V A+K + K E + ++ D A Sbjct: 192 AYFMVDMAHIAGLVAVGLHPNPVPYADFVTTTTHKTLRGPRGGMILCRE--------------EFGKKIDKSIFPGIQGGPLMHVISAKAVSFGEVLNGDFKTYAQNVIDNAKQLAETLLSEDIQLVSGGTDNHLVLIDLRSLGITGKIAENVLDEIGITVNKNAIPYDPEKPFVTSGVRVGTAAVTSRGFDQEAMKEVGSIIALALKHHEDEAKLEEAKKRVSDLTA 405
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA1_RHORT (Serine hydroxymethyltransferase 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=glyA1 PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.990e-43 Identity = 92/200 (46.00%), Postives = 123/200 (61.50%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 AI++ DMAH +GLVA GV PSP +ADV+T+TTHK+LRGPRG + +KIN AVFPGLQGGP H I AVA +A P +K Y +V+ NC AQTLL+ G + SGGT+ HL +V+L+ + G+ E+ LE++ I NKN +P D MV GIR+G+ A TSRGF E++ ++A Sbjct: 211 AILMVDMAHFAGLVAGGVYPSPVPFADVITSTTHKTLRGPRGGFVLTNDAA-------------IAKKINSAVFPGLQGGPLMHIIAAKAVAFGEALDPSFKIYARRVVENCRVLAQTLLDGGLAITSGGTDCHLAVVDLRPLGVTGTIAEQALESIGITLNKNAIPNDPEKPMVTSGIRVGSAAGTSRGFGPEEYRRIA 397 The following BLAST results are available for this feature:
BLAST of CX295854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295854 ID=CX295854; Name=CX295854; organism=Citrus clementina; type=EST; length=729bpback to top |