CX295854
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_ORITB (Serine hydroxymethyltransferase OS=Orientia tsutsugamushi (strain Boryong) GN=glyA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.211e-43 Identity = 98/221 (44.34%), Postives = 132/221 (59.73%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA-YFFDAAVKLA-VKIKSENSG 658 A +LAD+AHI+GLVA SP YA +VT+TTHK+LRGPRG +I + I+K KIN AVFPG+QGGP H I A+A +A P+YK Y QV+ N A+ L + GY +++GGT+NH++LV+L+ K I G E +L+A I NK +P D S + GIR+GTPA T+RGF E +F V Y D +A +K +N G Sbjct: 186 AYLLADIAHIAGLVATEYHSSPIPYAHIVTSTTHKTLRGPRGGLILSND--ESISK-----------KINSAVFPGMQGGPLMHVIAAKAIAFSEALMPQYKEYINQVMLNAKVLAKLLQDRGYNILTGGTDNHMLLVDLRGKNITGQEAEYLLDAAGITCNKQVMPFDTTSPTITSGIRLGTPACTTRGFKENEFITVGKYIADILDNIAIIKSAKKNEG 393
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_BORRA (Serine hydroxymethyltransferase OS=Borrelia recurrentis (strain A1) GN=glyA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.211e-43 Identity = 102/227 (44.93%), Postives = 134/227 (59.03%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKE-INKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSENSGNKLKDFV 679 A +L D+AH +GLVA G SP + A + T+TTHK+LRGPRG +I K IN KE D +N VFPG QGGP H I G AVA K+A E+K Y +V+ N A+ + G +VSGGT+NHL LV+L I G+ EK+LE+V+I NKN +P D + V GIR+G PA+TSRG +D KVA+F + A+K KS + K+K V Sbjct: 187 AYLLCDIAHTAGLVATGFHNSPIDVAHLTTSTTHKTLRGPRGGLILAGKEFNTMINYNNKERTLDLA--VNSCVFPGTQGGPLMHVIAGKAVAFKEALNKEFKDYISRVIENTKAMAEYFISEGLRIVSGGTDNHLFLVDLSGLGITGADAEKILESVNITLNKNAIPFDSKNPSVASGIRIGAPAITSRGLNRDDSIKVAHF----IIRALKTKSTDELRKIKQEV 407
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_BACSK (Serine hydroxymethyltransferase OS=Bacillus clausii (strain KSM-K16) GN=glyA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.211e-43 Identity = 93/227 (40.97%), Postives = 140/227 (61.67%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSENSGNKLKDFVA 682 A ++ DMAHI+GLVAAG+ +P YA VTTTTHK+LRGPRG MI + E ++ +K+++++FPG+QGGP H I AVA +A + E+K Y +Q+++N + + L G ++VSGGT+NHL+L++L++ ++ G EK L+AV I NKN +P D V GIR+GT A+TSRGF E + ++ +K I +E + N ++ VA Sbjct: 192 AYLMVDMAHIAGLVAAGLHQNPVPYAHFVTTTTHKTLRGPRGGMILCNEETAE----------EFGKKLDKSIFPGIQGGPLMHVIAAKAVAFGEALSDEFKTYAKQIIANAKRLGEKLQAEGVDIVSGGTDNHLLLLDLRSLQLTGKVAEKALDAVGITTNKNAIPFDPEKPFVTSGIRIGTAAVTSRGFGENEMDEIGELIALTLK---NIDNEEALNSVRSRVA 405
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA2_ERWCT (Serine hydroxymethyltransferase 2 OS=Erwinia carotovora subsp. atroseptica GN=glyA2 PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.211e-43 Identity = 92/191 (48.17%), Postives = 122/191 (63.87%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGF 574 AI DMAH++GLVAAG P+P A VVT+TTHK+LRGPRG +I KG E D+ +K+N AVFPG+QGGP H I AVA K+A PE+ YQ QV++N A+ + + GY++VS GT+NHL+L++L K G + L +I NKN+VP D S V G+R+GTPA+T+RGF Sbjct: 196 AIFWVDMAHVAGLVAAGEYPNPLPQAHVVTSTTHKTLRGPRGGIIL-AKGQSE----------DFYKKLNAAVFPGIQGGPLMHVIAAKAVAFKEALRPEFTVYQRQVVANARAMARIIQQRGYKIVSDGTDNHLLLIDLSAKPYTGKDADAALSDAYITTNKNSVPNDPRSPFVTSGLRIGTPAVTTRGF 375
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_WOLSU (Serine hydroxymethyltransferase OS=Wolinella succinogenes GN=glyA PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.806e-43 Identity = 92/200 (46.00%), Postives = 126/200 (63.00%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A++L D+AH++GL+ AG P+PF + +VTTTTHK+LRGPRG MI +EI K KI++AVFPG+QGGP H I AV + PE+K Y +QV +N A+ L+ GY LVSGGT+NHL+LV+L +K G ++ L I NKNTVPG+ S V G+R+G+ ALT+RG E++F +A Sbjct: 192 ALLLGDVAHVAGLIVAGEYPNPFPHCHIVTTTTHKTLRGPRGGMILTND--EEIAK-----------KIDKAVFPGMQGGPLMHVIAAKAVGFGENLKPEWKEYAKQVKANAKVLAKVLMARGYTLVSGGTDNHLILVSLLDKEFSGKDADRALGEAGITVNKNTVPGETRSPFVTSGVRIGSAALTARGMREKEFEFIA 378
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_WIGBR (Serine hydroxymethyltransferase OS=Wigglesworthia glossinidia brevipalpis GN=glyA PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.806e-43 Identity = 88/200 (44.00%), Postives = 128/200 (64.00%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A + AD++H++GL+ AG+ P+ YA VVTTTTHK+L GPRG +I + K+G + FY +K++ AVFPG QGGP H I AVA K+A T ++K YQ Q++ N + L+ + +VSGGT+NHL ++NL N + G ++LE +I NKN++P D ++ + GIR+GTPA+T RGF E + KVA Sbjct: 195 AYLFADISHVAGLIVAGIYPNAIPYAHVVTTTTHKTLSGPRGGLI--------LAKEGDDEFY---KKLDSAVFPGTQGGPLMHIIAAKAVAFKEAMTLKFKKYQHQLVKNSKSMVEIFLKRKFHVVSGGTKNHLFILNLSNIGLKGDLASEILEKANITVNKNSIPNDKLNPKITSGIRIGTPAITKRGFKEIESKKVA 383
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_ROSS1 (Serine hydroxymethyltransferase OS=Roseiflexus sp. (strain RS-1) GN=glyA PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.806e-43 Identity = 87/212 (41.04%), Postives = 130/212 (61.32%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVK-----EINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPG-DVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 622 A + AD+AH +GL+A G++PSP +YA VVT+TTHK+LRGPRG +I + + + K G+ + E +++ V PG+QGGP H I AV + PE++ Y QV+ N A L+ GY ++SGGT+NHL+L++L+NK + G ++ L+ I NKN VP D S ++ GIR+GTPALT+RG E + ++A D + Sbjct: 195 AFLFADIAHPAGLIAKGLLPSPIKYAHVVTSTTHKTLRGPRGGIILMGEDFENPFGLKAAKSGRTLMMS--ELLDKMVIPGVQGGPLMHVIAAKAVGFGENLQPEFETYARQVIRNAQTLANALIARGYHVLSGGTDNHLMLIDLRNKAVSGKAAQEALDRAAITTNKNAVPNDDKSPLITSGIRLGTPALTTRGMKEPEMEQIAALIDDVI 404
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_RICCN (Serine hydroxymethyltransferase OS=Rickettsia conorii GN=glyA PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.806e-43 Identity = 98/223 (43.95%), Postives = 129/223 (57.85%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSENSGNKLK 670 A +AD+AHI+GLVA G SP YA VT+TTHK+LRGPRG +I KIN A+FPGLQGGP H I AVA + PEYK+Y +QV+SN A +L E GY++++GGT+NH+VLV+L+ I G L+ I NKN +P D S + GIR+GTPA T+RGF E+DF V + A + +K +NS + K Sbjct: 196 AYFMADIAHIAGLVATGEHQSPIPYAHAVTSTTHKTLRGPRGGLILSNDEA-------------IGHKINSALFPGLQGGPLMHIIAAKAVAFLENLQPEYKSYIQQVISNAKALASSLQERGYDILTGGTDNHIVLVDLRKDGITGKLAANSLDRAGITCNKNAIPFDETSPFITSGIRLGTPACTTRGFKEKDFVLVGHMV-ADILDGLKNNEDNSALEQK 404
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_RICAE (Serine hydroxymethyltransferase OS=Rickettsia africae (strain ESF-5) GN=glyA PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.806e-43 Identity = 98/223 (43.95%), Postives = 129/223 (57.85%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSENSGNKLK 670 A +AD+AHI+GLVA G SP YA VT+TTHK+LRGPRG +I KIN A+FPGLQGGP H I AVA + PEYK+Y +QV+SN A +L E GY++++GGT+NH+VLV+L+ I G L+ I NKN +P D S + GIR+GTPA T+RGF E+DF V + A + +K +NS + K Sbjct: 196 AYFMADIAHIAGLVATGEHQSPIPYAHAVTSTTHKTLRGPRGGLILSNDEA-------------IGHKINSALFPGLQGGPLMHIIAAKAVAFLENLQPEYKSYIQQVISNAKALASSLQERGYDILTGGTDNHIVLVDLRKDGITGKLAANSLDRAGITCNKNAIPFDETSPFITSGIRLGTPACTTRGFKEKDFVLVGHMV-ADILDGLKNNEDNSALEQK 404
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_PROM0 (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain MIT 9301) GN=glyA PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.806e-43 Identity = 90/199 (45.23%), Postives = 129/199 (64.82%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKV 598 A ++AD+AHI+GLVA+ + P+P Y DVVTTTTHK+LRGPRG +I + ++ +K +++VFPG QGGP H I AVA +A P++ Y +QV+ N A TL+ G ++VSGGT+NH+VL++L++ + G + ++ V+I ANKNTVP D S V G+R+GT ALT+RGF E FA+V Sbjct: 195 AFLMADIAHIAGLVASKLHPNPIPYCDVVTTTTHKTLRGPRGGLILCKDA-------------EFGKKFDKSVFPGTQGGPLEHIIAAKAVAFGEALQPDFVNYSQQVIKNAKVLASTLINRGIDIVSGGTDNHIVLLDLRSINMTGKIADLLVSEVNITANKNTVPFDPESPFVTSGLRLGTAALTTRGFNENAFAEV 380 The following BLAST results are available for this feature:
BLAST of CX295854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295854 ID=CX295854; Name=CX295854; organism=Citrus clementina; type=EST; length=729bpback to top |