CX295854
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_CYAP7 (Serine hydroxymethyltransferase OS=Cyanothece sp. (strain PCC 7424) GN=glyA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.889e-43 Identity = 98/220 (44.55%), Postives = 136/220 (61.82%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF--------DAAVKLAVK 637 A +LAD+AHI+GLVA G PSP + VVTTTTHK+LRGPRG +I E+ K K ++AVFPG QGGP I G AVA +A PE+K Y QV++N A L++ G+++VS GTENHL+LV+L++ + G + ++++ V+I ANKNT+P D S V G+R+G+PA+T+RG E +F ++A D AVK VK Sbjct: 197 AYLLADIAHIAGLVATGHHPSPIPHCHVVTTTTHKTLRGPRGGLILTADA--ELGK-----------KFDKAVFPGTQGGPLEQVIAGKAVAFGEALKPEFKTYSGQVIANAQALANGLIKRGFKIVSNGTENHLMLVDLRSIGMTGKQADQLVSEVNITANKNTLPFDPESPFVTSGLRLGSPAMTTRGMKEAEFIEIANIIADRLLNPEDEAVKQDVK 403
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_CHLSY (Serine hydroxymethyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=glyA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.889e-43 Identity = 89/200 (44.50%), Postives = 127/200 (63.50%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVS-AMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A+++AD+AHI+GLVAAG PSP +A V+TTTTHK+LRGPRG +I D+ +++N +VFPG QGGP H I G AVA +A PE++ Y Q+ N A+ L+ G LVSGGT+NHL+LV+L++ + G++ ++ L+ I NKN +P D M GIR+GTPA+T+RG E + A++A Sbjct: 193 ALLMADIAHIAGLVAAGEHPSPVGHAHVITTTTHKTLRGPRGGLILMGD--------------DFAKQLNSSVFPGTQGGPLMHVIAGKAVAFGEALRPEFRQYAAQIRRNARALAEGLMAQGLTLVSGGTDNHLMLVDLRSTGLTGAQAQRALDKAAITVNKNAIPDDPQPPMKTSGIRIGTPAVTTRGMREPEMAQIA 378
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_CHLP8 (Serine hydroxymethyltransferase OS=Chlorobaculum parvum (strain NCIB 8327) GN=glyA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.889e-43 Identity = 96/216 (44.44%), Postives = 127/216 (58.80%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK------GVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVP-GDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLA 631 A ++AD+AH +GLVAAG+ +P + VTTTTHK+LRGPRG MI K G+ K G V E I+ V PG+QGGP H I G AVA +A PE+KAY +Q+ N + A L Y +VSGGT+NHL+L++L+NK ++G E +L I NKN VP D S V GIR+GTPA+T+RG + K+ F D + A Sbjct: 194 AFLMADIAHPAGLVAAGLSANPVPHCHFVTTTTHKTLRGPRGGMIMMGKDFENPMGITVNTKNGPRVKM-MSEVIDAEVMPGIQGGPLMHIIAGKAVAFGEALQPEFKAYAQQIKDNAAAMAAKFLAADYHIVSGGTKNHLMLLDLRNKNVNGKVAENLLHDAGITVNKNMVPFDDKSPFVTSGIRVGTPAMTTRGMKVAEAEKIVEFIDRVISAA 408
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_CHLAA (Serine hydroxymethyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=glyA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.889e-43 Identity = 89/200 (44.50%), Postives = 127/200 (63.50%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVS-AMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A+++AD+AHI+GLVAAG PSP +A V+TTTTHK+LRGPRG +I D+ +++N +VFPG QGGP H I G AVA +A PE++ Y Q+ N A+ L+ G LVSGGT+NHL+LV+L++ + G++ ++ L+ I NKN +P D M GIR+GTPA+T+RG E + A++A Sbjct: 193 ALLMADIAHIAGLVAAGEHPSPVGHAHVITTTTHKTLRGPRGGLILMGD--------------DFAKQLNSSVFPGTQGGPLMHVIAGKAVAFGEALRPEFRQYAAQIRRNARALAEGLMAQGLTLVSGGTDNHLMLVDLRSTGLTGAQAQRALDKAAITVNKNAIPDDPQPPMKTSGIRIGTPAVTTRGMREPEMAQIA 378
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_BACA2 (Serine hydroxymethyltransferase OS=Bacillus amyloliquefaciens (strain FZB42) GN=glyA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.889e-43 Identity = 92/208 (44.23%), Postives = 130/208 (62.50%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 625 A + DMAHI+GLVAAG+ P+P YAD VTTTTHK+LRGPRG MI R+ ++ +KI++++FPG+QGGP H I AV+ + ++K Y + V+SN A++L + G +LVSGGT+NHLVLV+L++ + G E VL+ + I +NKN +P D V GIR+GT A+TSRGF + +V A+K Sbjct: 192 AYFMVDMAHIAGLVAAGLHPNPVPYADFVTTTTHKTLRGPRGGMILCRE--------------EFGKKIDKSIFPGIQGGPLMHVIAAKAVSFGEVLEDDFKTYAQNVISNAKSLAESLNKEGIQLVSGGTDNHLVLVDLRSLGLTGKVAEHVLDEIGITSNKNAIPYDPEKPFVTSGIRLGTAAVTSRGFDGDALEEVGAIIGLALK 385
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_LISW6 (Serine hydroxymethyltransferase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=glyA PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.161e-42 Identity = 91/199 (45.73%), Postives = 126/199 (63.32%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKV 598 A ++ DMAHI+GLVAAG+ +P YAD TTTTHK+LRGPRG MI + ++E+K+N+++FPG+QGGP H I AVA +A PE+ Y EQ++ N K A+TL +++GG++NHL+L++LK + G VEKVL+ V I NKNT+P + S V GIR+G A+T+RGF E KV Sbjct: 192 AYLMVDMAHIAGLVAAGLHQNPVPYADFTTTTTHKTLRGPRGGMILAKA--------------EWEQKLNKSIFPGIQGGPLMHVIAAKAVAFGEALQPEFTTYCEQIIRNSKKLAETLQAHDVTVLTGGSDNHLLLIDLKPLSLTGKAVEKVLDEVGITVNKNTIPFETESPFVTSGIRVGVAAVTTRGFDEVAIEKV 376
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_ELUMP (Serine hydroxymethyltransferase OS=Elusimicrobium minutum (strain Pei191) GN=glyA PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.161e-42 Identity = 86/204 (42.16%), Postives = 125/204 (61.27%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 613 A ++ D+AH +GL+AAGV +P YAD+VTTTTHK+LRGPRG +I ++ + + +N +VFPG QGGP H I AV +A PE+K YQ QV+ N + + L ++GY +VSGGT+ H++ V+L +K + G E+ L+ I NKNT+P D + G+R+GTPA+T+RG E + A +A F D Sbjct: 193 AYLICDVAHYAGLIAAGVYSNPVPYADIVTTTTHKTLRGPRGGLILCKE--------------KHAKAVNSSVFPGQQGGPLMHVIAAKAVCFGEALKPEFKEYQTQVVKNAKELSTQLQKLGYRIVSGGTDCHVLCVDLTSKSMTGKAAEEALDKAGITTNKNTIPYDTQKPFITSGVRLGTPAVTTRGMKEAEMAAIASFID 382
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_CAMC5 (Serine hydroxymethyltransferase OS=Campylobacter curvus (strain 525.92) GN=glyA PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.161e-42 Identity = 89/200 (44.50%), Postives = 125/200 (62.50%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A++ AD+AHI+GLV AG +PF + DVV++TTHK+LRGPRG +I +Y +KIN ++FPG+QGGP H I AV K +PE+K Y +QV +N K ++ L+ G++LVSGGT+NHL+L++ N+ G + L I NKNTVPG+ S V GIR+G+PALT+RG E +F +A Sbjct: 190 ALLFADVAHIAGLVVAGEHQNPFPHCDVVSSTTHKTLRGPRGGIIMTNNE-------------EYAKKINASIFPGIQGGPLVHVIAAKAVGFKHNLSPEWKIYAKQVKANAKKLSEILISRGFDLVSGGTDNHLILMSFLNREFSGKDADIALGNAGITVNKNTVPGEKRSPFVTSGIRVGSPALTARGMKEAEFEIIA 376
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_ALCBS (Serine hydroxymethyltransferase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=glyA PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.161e-42 Identity = 92/200 (46.00%), Postives = 124/200 (62.00%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 AI+L DMAH++GLVAAGV PSP AD+ TTTTHK+L GPRG +I + K +E+ ++KIN AVFPG QGGP H I A+ K+A ++K YQ+QV+ N A +E G+++VS GTENHL L++L + I G + L +I NKN VP D S V G+R+G+P++T RGF E D +A Sbjct: 196 AILLVDMAHVAGLVAAGVYPSPVGIADITTTTTHKTLGGPRGGLI--------MGKASEEI----QKKINSAVFPGGQGGPLEHVIAAKAICFKEAMQDDFKGYQQQVVKNAQAMAGVFIERGFDVVSNGTENHLFLLSLIKQDITGKDADAALGRANITVNKNAVPNDPRSPFVTSGLRIGSPSITRRGFDEADAKALA 383
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_RICFE (Serine hydroxymethyltransferase OS=Rickettsia felis GN=glyA PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.516e-42 Identity = 95/201 (47.26%), Postives = 122/201 (60.70%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAY 604 A +AD+AHI+GLVA G SP Y VT+TTHK+LRGPRG +I +EI K KIN A+FPGLQGGP H I AVA + PEYK+Y +QV+SN A +L E GY++++GGT+NH+VLV+L I G L+ I NKN +P D S + GIR+GTPA T+RGF E+DF V + Sbjct: 196 AYFMADIAHIAGLVATGEHQSPIPYTHAVTSTTHKTLRGPRGGLILSND--EEIGK-----------KINSALFPGLQGGPLMHIIAAKAVAFLENLQPEYKSYIKQVISNAKALASSLQERGYDILTGGTDNHIVLVDLCKDGITGKLAANSLDRAGITCNKNAIPFDETSPFITSGIRLGTPACTTRGFKEKDFVLVGH 383 The following BLAST results are available for this feature:
BLAST of CX295854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295854 ID=CX295854; Name=CX295854; organism=Citrus clementina; type=EST; length=729bpback to top |