CX295854
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_CAMFF (Serine hydroxymethyltransferase OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=glyA PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.516e-42 Identity = 90/200 (45.00%), Postives = 122/200 (61.00%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A + AD+AHI+GLV AG +PF + VV++TTHK+LRGPRG +I ++ +KIN ++FPG+QGGP H I G AV K + E+K Y +QV +N K + L+ GY+LVSGGT+NHLVLV+ NK G + L I NKNTVPG+ S + GIR+G+PALT+RG E +F +A Sbjct: 190 AYLFADVAHIAGLVVAGEHNNPFPHCHVVSSTTHKTLRGPRGGIIMTNDE-------------EFAKKINSSIFPGIQGGPLMHVIAGKAVGFKHNLSDEWKVYAKQVKTNAKKLGEVLINRGYDLVSGGTDNHLVLVSFLNKEFSGKDADIALGNAGITVNKNTVPGETRSPFITSGIRVGSPALTARGMKESEFELIA 376
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_SILPO (Serine hydroxymethyltransferase OS=Silicibacter pomeroyi GN=glyA1 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.980e-42 Identity = 92/200 (46.00%), Postives = 122/200 (61.00%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A + DMAH +GLVAAG PSPF +A V TTTTHK+LRGPRG MI D +K+N A+FPG+QGGP H I AVA +A PE+K Y +QV++N + L++ G + V+ GT+ H+VLV+L+ K + G+ EK L HI NKN VP D V GIR+G+PA T+RGF E +F ++A Sbjct: 203 AYLHVDMAHFAGLVAAGEHPSPFPHAHVATTTTHKTLRGPRGGMILTNDE-------------DIAKKVNSAIFPGIQGGPLMHVIAAKAVAFGEALRPEFKTYIQQVIANAQALSDQLIKGGLDTVTHGTDTHVVLVDLRPKGVKGNATEKALGRAHITCNKNGVPFDPEKPTVTSGIRLGSPAGTTRGFAETEFRQIA 389
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_PHEZH (Serine hydroxymethyltransferase OS=Phenylobacterium zucineum (strain HLK1) GN=glyA PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.980e-42 Identity = 92/199 (46.23%), Postives = 127/199 (63.82%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKV 598 AI++ D+AH +GL+ AG P+PF +A +VTTTTHK+LRGPRG MI K++ K KI+ AVFPGLQGGP H I AVA +A PE+K Y QV+ N A++L +G+++VS GT++HL+LV+L K + G+ E LE I NKN++PGD + M G+R+GTPA T+RGF +F +V Sbjct: 205 AILMCDVAHYAGLIVAGEYPNPFPHAHIVTTTTHKTLRGPRGGMILTND--KKLAK-----------KIDSAVFPGLQGGPLMHVIAAKAVAFGEALKPEFKQYARQVIENARALAESLQSVGFKIVSNGTDSHLMLVDLTPKGVSGADAEIALERAGITTNKNSIPGDPLPPMQTSGLRVGTPAGTTRGFGPGEFRQV 390
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_GRAFK (Serine hydroxymethyltransferase OS=Gramella forsetii (strain KT0803) GN=glyA PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.980e-42 Identity = 90/211 (42.65%), Postives = 127/211 (60.19%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEK----INQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVP-GDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 622 AI++ADMAH +GL+A G+I P + +VT+TTHK+LRGPRG +I K + N G+++ +K +N +FPG QGGP H I A+A +A T E+ Y QV N K AQ +E Y+++SGGT+NH++L++L+NK + G E+ L I NKN VP D S V GIR+GTPA+T+RG E D K+ D + Sbjct: 188 AILVADMAHPAGLIAKGLISDPLPHCHIVTSTTHKTLRGPRGGIILMGKDFE--NPFGEKLKNGNLKKMSTMLNSGIFPGNQGGPLEHIIAAKAIAFGEALTDEFLHYTVQVKKNAEKLAQAFVEKDYKVISGGTDNHMMLIDLRNKNVSGKEAEEALSKADITVNKNMVPFDDKSPFVTSGIRIGTPAVTTRGLQENDMNKIVDLIDRVI 396
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_BACV8 (Serine hydroxymethyltransferase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=glyA PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.980e-42 Identity = 95/211 (45.02%), Postives = 129/211 (61.14%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEI--NKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRID--GSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 622 AI++ DMAH +GL+AAG++ +P +YA +VT+TTHK+LRGPRG +I K K K + ++ AVFPG+QGGP H I AVA + PEYK YQ QV N + AQ L++ G+ +VSGGT+NH +LV+L+ K D G EK L A I NKN VP D SA GIR+GTPA+T+RG E+ ++A + + Sbjct: 188 AILMIDMAHPAGLIAAGLLDNPVKYAHIVTSTTHKTLRGPRGGVIMMGKDFPNPWGKKTPKGEIKMMSQLLDSAVFPGIQGGPLEHVIAAKAVAFGECLQPEYKEYQTQVKKNAAVLAQALIDRGFTIVSGGTDNHSMLVDLRTKYPDLTGKVAEKALVAADITVNKNMVPFDSRSAFQTSGIRLGTPAITTRGAKEDLMLEIAEMIETVL 398
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_AQUAE (Serine hydroxymethyltransferase OS=Aquifex aeolicus GN=glyA PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.980e-42 Identity = 89/200 (44.50%), Postives = 125/200 (62.50%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A+ + DMAH +GL+A GV P+P YA VT+TTHK+LRGPR I K +Y + ++++VFPG+QGGP H I AVA K+A + E+K Y +QV+ N A+ L + G+++V+GGT++H+VLV+L+NK I G EK LE I NKN VP D + GIR+GT ALT+RG E++ K+A Sbjct: 192 ALFMVDMAHYAGLIAGGVYPNPVPYAQFVTSTTHKTLRGPRSGFILTTK--------------EYAKAVDKSVFPGIQGGPLMHVIAAKAVAFKEAMSEEFKEYAKQVVENARVLAEELKKYGFKIVTGGTDSHIVLVDLRNKNIIGKDAEKALEKAGITVNKNAVPFDPLPPTKTSGIRIGTAALTTRGMKEDEMRKIA 377
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_NATPD (Serine hydroxymethyltransferase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=glyA PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.586e-42 Identity = 97/202 (48.02%), Postives = 125/202 (61.88%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRID--GSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A LAD+AHI+GLVAAGV SP AD VT +THK++R RG ++ + +Y + I+ AVFPG QGGP H + G AV K+A PE++ Y +QV+ N + L E G+ LVSGGT+NHLVLV+L+ D G+ E+ LEA I NKNTVPG+ SA P GIR GTPALT+RGF E+ +VA Sbjct: 194 AYHLADIAHITGLVAAGVHQSPVGVADFVTGSTHKTIRAGRGGIVMCDE--------------EYADDIDAAVFPGAQGGPLMHNVAGKAVGFKEALQPEFEQYAQQVIDNAEALGERLQEHGFSLVSGGTDNHLVLVDLRESHPDTSGTVAEEALEAAGIVLNKNTVPGETRSAFNPSGIRAGTPALTTRGFDEQACERVA 381
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_LACS1 (Serine hydroxymethyltransferase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=glyA PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.586e-42 Identity = 93/201 (46.27%), Postives = 127/201 (63.18%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLE-MGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A ++ DMAHI+GLVA G+ P+P YAD+ TTTTHK+LRGPRG MI + +KIN VFPG QGGP H I G A A +A TPE+K Y EQ++ N + A + LVS G++NHL+L++++N ++G EK+L+ V+I NKN++P + +S GIR+GTPA+TSRGF EED +VA Sbjct: 191 AKLMVDMAHIAGLVAVGLHPNPVPYADITTTTTHKTLRGPRGGMILTND-------------ENLAKKINSNVFPGTQGGPLEHVIAGKAAAFGEALTPEFKEYGEQIIRNTQEMALCFADNEKARLVSNGSDNHLLLLDVRNFGLNGKEAEKLLDQVNITVNKNSIPFETLSPFKTSGIRIGTPAITSRGFNEEDSYQVA 378
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_KOSOT (Serine hydroxymethyltransferase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=glyA PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.586e-42 Identity = 94/216 (43.52%), Postives = 131/216 (60.65%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSE 649 A ++ DMAH +GLVAAG+ P+P ++A +VT+TTHK+LRGPRG +I E Y + IN+AVFPG+QGGP H I AVA +A E+K YQ ++++N A+ L +G +VSGGT+ HL LV+L K + G EK LE+ I NKNT+P + S V GIR+GTPA+T+RG E + +A + VK+ I+ E Sbjct: 193 AYLIVDMAHFAGLVAAGLYPNPVDHAHIVTSTTHKTLRGPRGGLIL----------TNDEELY---KAINKAVFPGIQGGPLMHVIAAKAVAFGEALKDEFKEYQMRIITNAKALAKELENLGLRIVSGGTDTHLFLVDLNPKNVTGKAAEKALESADITVNKNTIPKETRSPFVTSGIRIGTPAVTTRGMGESEMKVIA---ELIVKVIDNIQDE 392
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_FRATW (Serine hydroxymethyltransferase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=glyA PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.586e-42 Identity = 87/200 (43.50%), Postives = 121/200 (60.50%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A+++AD+AH++GLVAAGV P+PF Y V TTTTHK+LRGPRG +I + +K A+FPG+QGGP H I AVA K+A P + YQ+QVL N + L + G ++SGGT NHL+L+++ N G E L +I NKN++P D S V G+R+G+PA+T+RGF E++ VA Sbjct: 196 AVLMADIAHVAGLVAAGVYPNPFPYVYVATTTTHKTLRGPRGGLILCNNNP------------ELAKKFQSAIFPGIQGGPLMHVIAAKAVAFKEALEPSFVDYQKQVLKNAKAMEKVLKQRGINIISGGTSNHLLLLDITNTGFSGKEAEAALGRANITVNKNSIPNDPRSPFVTSGLRIGSPAITTRGFKEKECELVA 383 The following BLAST results are available for this feature:
BLAST of CX295854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295854 ID=CX295854; Name=CX295854; organism=Citrus clementina; type=EST; length=729bpback to top |