CX295854
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_XANC5 (Serine hydroxymethyltransferase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=glyA PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.154e-48 Identity = 98/200 (49.00%), Postives = 129/200 (64.50%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A + DMAHI+GLVAAGV PSP E+A VVT+TTHK+LRGPRG +I + +E+ K K+ VFPG+QGGP H I AVA K+A P +K YQ+QV+ N A TL+ GY++VSGGTENHL+LV++ + + G E L HI NKN+VP D S V G+R+GTPA+T+RG+ E+D +A Sbjct: 195 AYLFVDMAHIAGLVAAGVYPSPMEHAHVVTSTTHKTLRGPRGGIIVAKGASEELQK-----------KLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPAFKTYQQQVVKNAQAMANTLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTSGLRLGTPAITTRGYQEQDSIDLA 383
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_XANAC (Serine hydroxymethyltransferase OS=Xanthomonas axonopodis pv. citri GN=glyA PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.154e-48 Identity = 98/200 (49.00%), Postives = 129/200 (64.50%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A + DMAHI+GLVAAGV PSP E+A VVT+TTHK+LRGPRG +I + +E+ K K+ VFPG+QGGP H I AVA K+A P +K YQ+QV+ N A TL+ GY++VSGGTENHL+LV++ + + G E L HI NKN+VP D S V G+R+GTPA+T+RG+ E+D +A Sbjct: 195 AYLFVDMAHIAGLVAAGVYPSPMEHAHVVTSTTHKTLRGPRGGIIVAKGASEELQK-----------KLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPAFKTYQQQVVKNAQAMANTLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTSGLRLGTPAITTRGYQEQDSIDLA 383
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_SHISS (Serine hydroxymethyltransferase OS=Shigella sonnei (strain Ss046) GN=glyA PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.119e-48 Identity = 100/200 (50.00%), Postives = 129/200 (64.50%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A + DMAH++GLVAAGV P+P +A VVTTTTHK+L GPRG +I + G +E+ K K+N AVFPG QGGP H I G AVALK+A PE+K YQ+QV N + LE GY++VSGGT+NHL LV+L +K + G + L +I NKN+VP D S V GIR+GTPA+T RGF E + ++A Sbjct: 195 AYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYK-----------KLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELA 383
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_SHIFL (Serine hydroxymethyltransferase OS=Shigella flexneri GN=glyA PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.119e-48 Identity = 100/200 (50.00%), Postives = 129/200 (64.50%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A + DMAH++GLVAAGV P+P +A VVTTTTHK+L GPRG +I + G +E+ K K+N AVFPG QGGP H I G AVALK+A PE+K YQ+QV N + LE GY++VSGGT+NHL LV+L +K + G + L +I NKN+VP D S V GIR+GTPA+T RGF E + ++A Sbjct: 195 AYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYK-----------KLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELA 383
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_SHIF8 (Serine hydroxymethyltransferase OS=Shigella flexneri serotype 5b (strain 8401) GN=glyA PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.119e-48 Identity = 100/200 (50.00%), Postives = 129/200 (64.50%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A + DMAH++GLVAAGV P+P +A VVTTTTHK+L GPRG +I + G +E+ K K+N AVFPG QGGP H I G AVALK+A PE+K YQ+QV N + LE GY++VSGGT+NHL LV+L +K + G + L +I NKN+VP D S V GIR+GTPA+T RGF E + ++A Sbjct: 195 AYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYK-----------KLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELA 383
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_SHIDS (Serine hydroxymethyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=glyA PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.119e-48 Identity = 100/200 (50.00%), Postives = 129/200 (64.50%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A + DMAH++GLVAAGV P+P +A VVTTTTHK+L GPRG +I + G +E+ K K+N AVFPG QGGP H I G AVALK+A PE+K YQ+QV N + LE GY++VSGGT+NHL LV+L +K + G + L +I NKN+VP D S V GIR+GTPA+T RGF E + ++A Sbjct: 195 AYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYK-----------KLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELA 383
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_SHIBS (Serine hydroxymethyltransferase OS=Shigella boydii serotype 4 (strain Sb227) GN=glyA PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.119e-48 Identity = 100/200 (50.00%), Postives = 129/200 (64.50%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A + DMAH++GLVAAGV P+P +A VVTTTTHK+L GPRG +I + G +E+ K K+N AVFPG QGGP H I G AVALK+A PE+K YQ+QV N + LE GY++VSGGT+NHL LV+L +K + G + L +I NKN+VP D S V GIR+GTPA+T RGF E + ++A Sbjct: 195 AYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYK-----------KLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELA 383
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_SHIB3 (Serine hydroxymethyltransferase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=glyA PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.119e-48 Identity = 100/200 (50.00%), Postives = 129/200 (64.50%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A + DMAH++GLVAAGV P+P +A VVTTTTHK+L GPRG +I + G +E+ K K+N AVFPG QGGP H I G AVALK+A PE+K YQ+QV N + LE GY++VSGGT+NHL LV+L +K + G + L +I NKN+VP D S V GIR+GTPA+T RGF E + ++A Sbjct: 195 AYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYK-----------KLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELA 383
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_GEOLS (Serine hydroxymethyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=glyA PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.119e-48 Identity = 100/207 (48.31%), Postives = 130/207 (62.80%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 622 A ++ DMAHI+GLVAAGV P+P YA+ VTTTTHK+LRGPRG MI R+ +Y + IN +FPG+QGGP H I AVA K+A PE+K YQ+Q++ N +K A+ L+ G++L SGGT+NHL+L+N I G E+ L+ I NKNTVP + S V GIR+GTPA TS G E + +VA F AV Sbjct: 192 AKVMVDMAHIAGLVAAGVHPNPVPYAEFVTTTTHKTLRGPRGGMILCRE--------------EYAKTINSQIFPGIQGGPLMHVIAAKAVAFKEALQPEFKTYQQQIVKNAAKLAECLMAKGFKLTSGGTDNHLMLINFTGTEITGKAAEEALDKAGITVNKNTVPFETRSPFVTSGIRVGTPACTSHGLKETEMEQVAGFIADAV 384
BLAST of CX295854 vs. ExPASy Swiss-Prot
Match: GLYA_EUBR3 (Serine hydroxymethyltransferase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=glyA PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.119e-48 Identity = 98/200 (49.00%), Postives = 130/200 (65.00%), Query Frame = 2 Query: 5 AIMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVFYDYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVA 601 A+++ DMAHI+GLVAAG+ PSP YA V TTTTHK+LRGPRG MI + +++ + N+A+FPG+QGGP H I AV K+A PE+K YQ+Q++ N + L G ++VS GT+NHL+LV+L + G +EK+L+A HI ANKNT+P D V GIR+GTPA TSRG E+DF KVA Sbjct: 194 AVLMVDMAHIAGLVAAGLHPSPIPYAHVTTTTTHKTLRGPRGGMILCSQEMQD------------KYNFNKAIFPGIQGGPLMHVIAAKAVCFKEALQPEFKEYQKQIVKNAQALCKGLQSRGIKIVSDGTDNHLMLVDLTPFGLTGKSIEKLLDAAHITANKNTIPNDPQKPFVTSGIRLGTPAATSRGLKEDDFDKVA 381 The following BLAST results are available for this feature:
BLAST of CX295854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295854 ID=CX295854; Name=CX295854; organism=Citrus clementina; type=EST; length=729bpback to top |