CX295865
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295865 vs. ExPASy Swiss-Prot
Match: IF2A_XENLA (Eukaryotic translation initiation factor 2 subunit 1 OS=Xenopus laevis GN=eif2s1 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.537e-37 Identity = 83/160 (51.88%), Postives = 106/160 (66.25%), Query Frame = 2 Query: 116 PNLECRMYEARYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGI----DLEELYVNIGWPLYWKYGH----AFEAFKIIVTDPD 571 P L CR Y+ ++PEVD VM+ V++IA+MGAYVSLLEYNNIEGMIL SE ++GR E V+V+RVDK+KGYIDLSKRRVS E+ CE+++ KSK V+SI+RHVAE L L+ L+ W KY A++AFK V+DPD Sbjct: 2 PGLNCRFYQHKFPEVDDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKDKGYIDLSKRRVSPEEALKCEDKFTKSKTVYSILRHVAEVLDYTKDEQLDSLFQRTAWVFDEKYKKPGYGAYDAFKNAVSDPD 161
BLAST of CX295865 vs. ExPASy Swiss-Prot
Match: IF2A_CHICK (Eukaryotic translation initiation factor 2 subunit 1 OS=Gallus gallus GN=EIF2S1 PE=2 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 3.425e-37 Identity = 86/166 (51.81%), Postives = 111/166 (66.87%), Query Frame = 2 Query: 116 PNLECRMYEARYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGI----DLEELYVNIGWPLYWKYGH----AFEAFKIIVTDPDSVLNSL 589 P L CR Y+ ++PEV+ VM+ V++IA+MGAYVSLLEYNNIEGMIL SE ++GR E V+V+RVDKEKGYIDLSKRRVS E+ CE+++ KSK V+SI+RHVAE L LE L+ W KY A++AFK V+DP ++L+SL Sbjct: 2 PALSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDP-AILDSL 166
BLAST of CX295865 vs. ExPASy Swiss-Prot
Match: IF2A_METJA (Translation initiation factor 2 subunit alpha OS=Methanocaldococcus jannaschii GN=eif2a PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.933e-18 Identity = 64/210 (30.48%), Postives = 106/210 (50.48%), Query Frame = 2 Query: 149 YPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYWKYGHAFEAFKIIVTDPDSVLNSL--TREVK----EIGPDGQEVTKV-----------IPAVTEEVKDALVKILGEDDPQPLKIELT 727 +PE V+ VK++ GA+V LLEY EGMI SE KVG+ VLRVD+ KG+IDLS +RV+E+ +A + + + + ++ AE LG LEE + +G+ L ++G + AF+ +V + VL+ L + E K E+ + E+T V P +++K AL L + + +++++T Sbjct: 8 FPEEGDIVIGTVKDVKPYGAFVELLEYPGKEGMIHISEVTSGWVKNIRDHVKVGQRVVAKVLRVDERKGHIDLSLKRVTEQQKRAKVQEWKRFQRASKMLERAAEKLGKSLEEAWEEVGYLLEDEFGELYNAFETMVIEGKEVLDDLEISEEWKNVLYEVAKESIELTNVEVEGVIEMKSYAPDGIKQIKKALTTALKANPYEDVEVKIT 217
BLAST of CX295865 vs. ExPASy Swiss-Prot
Match: IF2A_PYRKO (Translation initiation factor 2 subunit alpha OS=Pyrococcus kodakaraensis GN=eif2a PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.654e-15 Identity = 59/194 (30.41%), Postives = 93/194 (47.94%), Query Frame = 2 Query: 149 YPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYWKYGHAFEAFKIIVTDPDSVLNSLTR---------------EVKEIGPDGQ-EVTKVIPAVTEEVKDALVK 682 YPE V+ VKNI GA+++L EY EG + SE K G+ V+RVD EKG+IDLS +RV+++ +A + Y +++ ++++ AE LG D E + + PL +YG + AF+ + VL L E+ + D + E+T P E +K+AL+K Sbjct: 8 YPEEGEFVVATVKNIHPYGAFLTLDEYPGKEGFMHISEVAPTWVKNIRDYLKEGQKIVAKVIRVDPEKGHIDLSLKRVNQQQRKAKLQEYKRAQKAENLLKMAAEKLGKDFETAWREVWVPLEEEYGEVYAAFEDAAQNGMDVLKGLISDEWIEALKPIIEAYVEIPTVTIDAEFEITVPKPNGIEIIKEALIK 201
BLAST of CX295865 vs. ExPASy Swiss-Prot
Match: IF2A_THEGJ (Translation initiation factor 2 subunit alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=eIF2A PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.821e-15 Identity = 59/194 (30.41%), Postives = 96/194 (49.48%), Query Frame = 2 Query: 149 YPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYWKYGHAFEAFKIIVTD---------PDSVLNSLTR------EVKEIGPDGQ-EVTKVIPAVTEEVKDALVK 682 YPE V+ VKNI GA++ L EY EG + SE K G+ V V+RVD EKG+IDLS +RV+++ +A + Y +++ ++++ AE +G D E + + PL +YG + AF+ + PD L++L E+ + D + E+T P E +K+AL++ Sbjct: 8 YPEEGEFVVATVKNIHPYGAFLILDEYPGKEGFMHISEVAPTWVKNIRDYVKEGQKVVVKVIRVDPEKGHIDLSLKRVNQQQRKAKLQEYKRAQKAENLLKMAAEKIGKDFETAWREVWVPLEEEYGEVYAAFEDAAQNGIEVLKGLIPDEWLDALKPIIEAYVEIPTVTIDAEFEITVPKPNGIEIIKEALIR 201
BLAST of CX295865 vs. ExPASy Swiss-Prot
Match: IF2A_SULTO (Translation initiation factor 2 subunit alpha OS=Sulfolobus tokodaii GN=eif2a PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.285e-15 Identity = 55/174 (31.61%), Postives = 89/174 (51.15%), Query Frame = 2 Query: 182 VKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYWKYGHAFEAFKIIVTDPDSVLNSLTREVKEIGPDGQEVTKVIPAVTEEVKDALVKILGEDDP 703 VK I D G+YV+L EY N++ + +SE K GR V V+RVDK KG ID+S ++V+E++ + ++ K + V I+ V++ + +E + + W L KYG A++A V + DS+L + I P +E+ K I + VK + + L DP Sbjct: 19 VKQIFDYGSYVTLDEYGNLQAFLPWSEISSRWVKNIRDVIKEGRKIVVKVIRVDKRKGTIDVSLKKVTEDEKRKKMSQWKKIQKVDKILEIVSQKINKTEKEGWEQVAWKLEDKYGDAYDALVKAVKEGDSILKNAGVPEVWIKPLMEEIGKHIE--EKRVKKSEIVTLRSSDP 190
BLAST of CX295865 vs. ExPASy Swiss-Prot
Match: IF2A_THEON (Translation initiation factor 2 subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=eIF2A PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.949e-14 Identity = 58/194 (29.90%), Postives = 94/194 (48.45%), Query Frame = 2 Query: 149 YPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYWKYGHAFEAFK------------IIVTDPDSVLNSLTR---EVKEIGPDGQ-EVTKVIPAVTEEVKDALVK 682 YPE V+ VK+I GA++ L EY EG + SE K G+ V+RVD KG+IDLS +RV+++ +A + Y +++ ++++ AE LG D E + + PL +YG + AF+ II + LN + + EV + D + E+T P E +K+AL++ Sbjct: 8 YPEEGEFVIATVKSIHPYGAFLKLDEYPGKEGFMHISEVASTWVKNIRDYVKEGQKVVAKVIRVDPNKGHIDLSLKRVNQQQRKAKLQEYKRAQKAENLLKMAAEKLGKDFEMAWQEVWVPLEEEYGEVYAAFEDAAQNGIEVLKGIIPEEWLEPLNEIVQNYVEVPTVTIDAEFEITVPKPNGIEIIKEALIR 201
BLAST of CX295865 vs. ExPASy Swiss-Prot
Match: IF2A_PYRFU (Translation initiation factor 2 subunit alpha OS=Pyrococcus furiosus GN=eif2a PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.076e-14 Identity = 57/194 (29.38%), Postives = 94/194 (48.45%), Query Frame = 2 Query: 149 YPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYWKYGHAFEAFKIIVTD---------PDSVLNSLTR------EVKEIGPDGQ-EVTKVIPAVTEEVKDALVK 682 YPE V+ VK + + GA++ L EY EG + SE + G+ V+RVD +KG+IDLS RRV+++ +A + + +++ ++++ AE LG D EE + + PL ++G + AF+ + PD L L EV + D + E+T P E +K+AL+K Sbjct: 8 YPEEGELVVATVKRVHNYGAFLDLDEYPGKEGFMHISEVASTWVKNIRDYLREGQKVVAKVIRVDPKKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFEEAWREVWVPLENEWGEVYAAFEDAARNGIEVLKGYVPDEWLPVLKEIIDSYVEVPTVTIDAEFEITVPKPNGIEIIKEALIK 201
BLAST of CX295865 vs. ExPASy Swiss-Prot
Match: IF2A_PYRHO (Translation initiation factor 2 subunit alpha OS=Pyrococcus horikoshii GN=eif2a PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.022e-13 Identity = 58/194 (29.90%), Postives = 91/194 (46.91%), Query Frame = 2 Query: 149 YPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYWKYGHAFEAFKIIVTD---------PDSVLNSLTR------EVKEIGPDGQ-EVTKVIPAVTEEVKDALVK 682 YPE V+ VK I + GA++ L EY E + SE K G+ V+RVD KG+IDLS RRV+++ +A + + +++ +++R AE LG D E + + PL ++G + AF+ D PD L L EV + D + E+T P E +K+AL++ Sbjct: 8 YPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLRLAAEKLGKDFEAAWREVWVPLEEEWGEVYAAFEDAAKDGIEVLKGHVPDEWLPVLKEIVENYVEVPTVTIDAEFEITVPKPNGVEIIKEALIR 201
BLAST of CX295865 vs. ExPASy Swiss-Prot
Match: IF2A_PYRAB (Translation initiation factor 2 subunit alpha OS=Pyrococcus abyssi GN=eif2a PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.504e-13 Identity = 57/194 (29.38%), Postives = 91/194 (46.91%), Query Frame = 2 Query: 149 YPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSEXXXXXXXXXXXXXKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLGIDLEELYVNIGWPLYWKYGHAFEAFKIIVTD---------PDSVLNSLTR------EVKEIGPDGQ-EVTKVIPAVTEEVKDALVK 682 YPE V+ VK I + GA++ L EY E + SE K G+ V+RVD KG+IDLS RRV+++ +A + + +++ ++++ AE LG D E + + PL ++G + AF+ D PD L L EV + D + E+T P E +K+AL++ Sbjct: 8 YPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREVWVPLEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTIDAEFEITVPKPNGVEIIKEALIR 201 The following BLAST results are available for this feature:
BLAST of CX295865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295865 ID=CX295865; Name=CX295865; organism=Citrus clementina; type=EST; length=747bpback to top |