CX295866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295866 vs. ExPASy Swiss-Prot
Match: MPPB_SCHPO (Probable mitochondrial-processing peptidase subunit beta OS=Schizosaccharomyces pombe GN=qcr1 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 8.173e-38 Identity = 91/237 (38.40%), Postives = 133/237 (56.12%), Query Frame = 2 Query: 8 VILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPA----IFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKP-DCLDDLAYAIMYETTKLAYRVSEADVTRAPYQLKS 703 VILR V+FDHLHATA+Q PLGRTILGP +NI+++T+E L YI +Y + RM+I+++G+ F L +A QL P F GSE+R DDD P A A+A G SW PD +VMQA++G+W++ H+ S L+ V +++A S M+F+T+Y DTGL+G+Y V + +DDL + + +L + A+V RA QL++ Sbjct: 142 VILREQEEVDKMADEVVFDHLHATAYQGHPLGRTILGPKENIESLTREDLLQYIKDNYRSDRMIISSAGSISHEELVKLAEKYFGHLEP---SAEQLSLGAPRGLKPRFVGSEIRARDDDSPTANIAIAVEGMSWKHPDYFTALVMQAIIGNWDRAMGASPHLSSRLSTIVQQHQLANSFMSFSTSYSDTGLWGIYLVTENLGRIDDLVHFTLQNWARLTV-ATRAEVERAKAQLRA 374
BLAST of CX295866 vs. ExPASy Swiss-Prot
Match: QCR1_RAT (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus GN=Uqcrc1 PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.378e-37 Identity = 82/233 (35.19%), Postives = 129/233 (55.36%), Query Frame = 2 Query: 5 DVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRAPYQLKS 703 DVILR V+FD+LHATAFQ TPL + + GP++N++ +++ L +Y+ HY APRMV+AA+G F+ +S + + P FTGSE+R DD +PLA A+A G W +PD++AL V A++G ++ GG H+ S LA N++ +S FN +Y +TGL G + V +DD+ + + + +L +E++VTR L++ Sbjct: 166 DVILREMQENDASMQNVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLSRHYKAPRMVLAAAGGVKHQQLLDLAQDHFSSVS-QVYEEDAVPSITPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPDNVALQVANAIIGHYDCTYGGGVHLSSPLASVAVANKLCQSFQTFNISYSETGLLGAHFVCDAMSIDDMIFFLQGQWMRLCTSATESEVTRGKNILRN 397
BLAST of CX295866 vs. ExPASy Swiss-Prot
Match: QCR1_MOUSE (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus GN=Uqcrc1 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.485e-36 Identity = 80/233 (34.33%), Postives = 127/233 (54.51%), Query Frame = 2 Query: 5 DVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRAPYQLKS 703 DVILR V+FD+LHATAFQ TPL + + GP++N++ +++ L +Y++ +Y APRMV+AA+G + +S + P FTGSE+R DD +PLA A+A G W +PD++ L V A++G ++ GG H+ S LA N++ +S FN +Y DTGL G + V +DD+ + + + +L +E++VTR L++ Sbjct: 166 DVILREMQENDASMQNVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLNRNYKAPRMVLAAAGGVEHQQLLDLAQKHLSSVSR-VYEEDAVPGLTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPDNVTLQVANAIIGHYDCTCGGGVHLSSPLASVAVANKLCQSFQTFNISYSDTGLLGAHFVCDAMSIDDMVFFLQGQWMRLCTSATESEVTRGKNILRN 397
BLAST of CX295866 vs. ExPASy Swiss-Prot
Match: QCR1_BOVIN (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus GN=UQCRC1 PE=1 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.105e-34 Identity = 80/235 (34.04%), Postives = 125/235 (53.19%), Query Frame = 2 Query: 5 DVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSA--DPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRAPYQLKS 703 DVIL+ V+F++LHATAFQ TPL +++ GP++N++ +++ L Y+ HY APRMV+AA+G F+ LS D L P FTGS++ +D +PLA A+A G W PD++AL V A++G ++ GG H+ S LA N++ +S FN Y DTGL G + V +DD+ + + + +L +E++V R L++ Sbjct: 166 DVILQELQENDTSMRDVVFNYLHATAFQGTPLAQSVEGPSENVRKLSRADLTEYLSRHYKAPRMVLAAAGGLEHRQLLDLAQKHFSGLSGTYDEDAVPTL---SPCRFTGSQICHREDGLPLAHVAIAVEGPGWAHPDNVALQVANAIIGHYDCTYGGGAHLSSPLASIAATNKLCQSFQTFNICYADTGLLGAHFVCDHMSIDDMMFVLQGQWMRLCTSATESEVLRGKNLLRN 397
BLAST of CX295866 vs. ExPASy Swiss-Prot
Match: QCR1_HUMAN (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Homo sapiens GN=UQCRC1 PE=1 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 3.214e-34 Identity = 80/235 (34.04%), Postives = 125/235 (53.19%), Query Frame = 2 Query: 5 DVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQ--LVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRAPYQLKS 703 DVILR V+F++LHATAFQ TPL + + GP++N++ +++ L Y+ THY APRMV+AA+G L P T ++ + P FTGSE+R DD +P A A+A G W PD++AL V A++G ++ GG H+ S LA N++ +S F+ Y +TGL G + V +DD+ + + + +L +E++V R L++ Sbjct: 166 DVILREMQENDASMRDVVFNYLHATAFQGTPLAQAVEGPSENVRKLSRADLTEYLSTHYKAPRMVLAAAGGVEHQQLLDLAQK---HLGGIPWTYAEDAVPTLTPCRFTGSEIRHRDDALPFAHVAIAVEGPGWASPDNVALQVANAIIGHYDCTYGGGVHLSSPLASGAVANKLCQSFQTFSICYAETGLLGAHFVCDRMKIDDMMFVLQGQWMRLCTSATESEVARGKNILRN 397
BLAST of CX295866 vs. ExPASy Swiss-Prot
Match: MPPB_YEAST (Mitochondrial-processing peptidase subunit beta OS=Saccharomyces cerevisiae GN=MAS1 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.018e-28 Identity = 82/243 (33.74%), Postives = 125/243 (51.44%), Query Frame = 2 Query: 5 DVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEP----AIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGIN-EIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTK-----LAYRVSEADVTRAPYQLKS 703 DVI+R V+FDHLH ++ PLGRTILGP +NIK+IT+ L++YI +Y RMV+A +GA F + P + S + P +F E I ++ +P A+A G SW+ PD + QA++G+W++ G + S LA N +A S M+F+T+Y D+GL+G+Y V D + I+ E K + ++S+A+V RA QLK+ Sbjct: 145 DVIIRESEEVDKMYDEVVFDHLHEITYKDQPLGRTILGPIKNIKSITRTDLKDYITKNYKGDRMVLAGAGAVDHEKLVQYAQKYFGHV---PKSESPVPLGSPRGPLPVFCRGERFIKENTLPTTHIAIALEGVSWSAPDYFVALATQAIVGNWDRAIGTGTNSPSPLAVAASQNGSLANSYMSFSTSYADSGLWGMYIVT--DSNEHNVQLIVNEILKEWKRIKSGKISDAEVNRAKAQLKA 382
BLAST of CX295866 vs. ExPASy Swiss-Prot
Match: UCR1_CAEEL (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Caenorhabditis elegans GN=ucr-1 PE=2 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.652e-25 Identity = 68/220 (30.91%), Postives = 107/220 (48.64%), Query Frame = 2 Query: 53 VIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDD---LAYAIMYETTKLAYRVSEADVTRAPYQLKS 703 V+FD LHA FQ TPL ++LG +++I I+ + L+ + HY RMV++A G + P Q+ FTGSE R +D++P A A G + D++AL + +G W+ + S L Q++G + ++ FN NYKDTGLFG+Y VA L+D + ++ +E LA +E +V A Q ++ Sbjct: 172 VLFDMLHAAGFQGTPLALSVLGTSESIPNISAQQLKEWQEDHYRPVRMVLSAVGGGVSNVSSLADKYFGDLSNEYPRKVPQVDGTR---FTGSEYRYRNDNVPHMYAAFAVEGVGYAHKDALALQIANQFIGQWDVTHATSRTAASRLVQKIGHDHGVHNLQHFNINYKDTGLFGIYFVADAHDLNDTSGIMKSVAHEWKHLASAATEEEVAMAKNQFRT 388
BLAST of CX295866 vs. ExPASy Swiss-Prot
Match: QCR1_EUGGR (Ubiquinol-cytochrome-c reductase complex core protein I, mitochondrial OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.549e-20 Identity = 73/238 (30.67%), Postives = 111/238 (46.64%), Query Frame = 2 Query: 53 VIFDHLHATAFQYTPLGRTILGPAQNI-KTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELA----------------QRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDC-----LDDLAYAIMYETTKLAYRVSEADVTRAPYQLK 700 V+ DHLH+ AF+ + LG +ILGP +NI K+ITK + +++ THYT PRM + SGA F L S F G + R + PL AVAF + PD+I + V++ +LGS++++ + A + G N I S+ AF Y D GL G YA+A+P +++ + M E +++ +SE + RA QLK Sbjct: 161 VLMDHLHSAAFEGSGLGLSILGPLENIQKSITKGMIDDFVKTHYTGPRMALVGSGAVDHGQLCDLASKYFGALPTGQPKPSGFTR-----FLGGDKRETNQLNPLTHVAVAFQTPGISHPDAIKIKVLEQLLGSYSRDKGEAAYSCFARAIVMDFYDPKVGQFFRPNKAGHNPI-HSLNAFWAPYSDVGLLGFYAIAEPGKSYGHEWENILHYAMRELIRVSRNISEEEFERAKNQLK 392
BLAST of CX295866 vs. ExPASy Swiss-Prot
Match: QCR1_YEAST (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Saccharomyces cerevisiae GN=COR1 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.662e-17 Identity = 55/216 (25.46%), Postives = 100/216 (46.30%), Query Frame = 2 Query: 56 IFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGV-YAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRAPYQLK 700 + +HLH+TAFQ TPL G ++++ + L+++ + H+ V+ +G L T ++ V + A F GSEVR+ DD +P A ++A G P+ + + GS+N + G +L + ++ ++ F+ +YKD+GL+G A +DDL + + + +L V++ +V RA LK Sbjct: 160 VLEHLHSTAFQNTPLSLPTRGTLESLENLVVADLESFANNHFLNSNAVVVGTGNIKHEDLVNSIESKNLSLQ----TGTKPVLKKKAAFLGSEVRLRDDTLPKAWISLAVEGEPVNSPNYFVAKLAAQIFGSYNAFEPASRLQGIKLLDNIQEYQLCDNFNHFSLSYKDSGLWGFSTATRNVTMIDDLIHFTLKQWNRLTISVTDTEVERAKSLLK 371
BLAST of CX295866 vs. ExPASy Swiss-Prot
Match: Y338_RICFE (Uncharacterized zinc protease RF_0338 OS=Rickettsia felis GN=RF_0338 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.075e-13 Identity = 54/232 (23.28%), Postives = 108/232 (46.55%), Query Frame = 2 Query: 8 VILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMVIAASGAXXXXXXXXXXXXLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRAPYQLKS 703 VIL+ +I++ +++ ++ PLG+ ILG ++ + + TKEH ++I HY A + ++ +G LF+ L + PA + G I+ D+ + F G + + + + + A++ +S +H+ +L +A ++ ++N+ Y D+G+F +YA D L+ L + E TK+ +V+E ++ RA QL+S Sbjct: 125 VILQEIAHSQDNPDDLIYEKFYSSVYKDQPLGKPILGASKTLSSFTKEHFLSFIDKHYNAGNLYLSVAGNVDHDKIVSSAERLFSSLKQGEKSNFL-----PAKYIGGN-SFINKDLEQTTLILGFEGTPYINLERLYRTQLLAIIFGGGMSSRLFQHIREKLG-------LAYAVGSYNSTYSDSGVFTIYASTAHDKLELLYKELKTEITKMTEKVNEEEMIRAKTQLRS 343 The following BLAST results are available for this feature:
BLAST of CX295866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295866 ID=CX295866; Name=CX295866; organism=Citrus clementina; type=EST; length=705bpback to top |