CX295868
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295868 vs. ExPASy Swiss-Prot
Match: ARL3_PONAB (ADP-ribosylation factor-like protein 3 OS=Pongo abelii GN=ARL3 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.350e-32 Identity = 71/165 (43.03%), Postives = 103/165 (62.42%), Query Frame = 2 Query: 92 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 586 +E+RIL++GLD AGKTT+L +L +I PT GFN+++V+ + VWD+GGQ KIRP W++YF+NT L EL +L E++L +L+FANKQDL A A+EI + L LH++R R W IQS A +GEG+ +G++W+ N+ K Sbjct: 16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWKNYFENTDIL-----------------ELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK 163
BLAST of CX295868 vs. ExPASy Swiss-Prot
Match: ARL6_CAEBR (ADP-ribosylation factor-like protein 6 OS=Caenorhabditis briggsae GN=arl-6 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.875e-31 Identity = 76/179 (42.46%), Postives = 111/179 (62.01%), Query Frame = 2 Query: 59 FTKLFSRLFA--KKEMRILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 577 F S LF KK++ I++VGLD +GKTTIL +LK E + +PT+G V +N+SF +D+ GQ K R W YF ++QG+IFV+DS+DR R+ +DEL +L+ ++ R +++ ANK D+P AM A+IT LGL+ R W I STCA +G+GL + + LS+ I Sbjct: 3 FLSSLSNLFGMGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRVRMELLKDELWLVLDHKDVASRGIPVVILANKMDIPGAMTCADITAALGLNLHRSGTWSIHSTCALTGDGLDKAMQQLSSEI 181
BLAST of CX295868 vs. ExPASy Swiss-Prot
Match: ARL11_RAT (ADP-ribosylation factor-like protein 11 OS=Rattus norvegicus GN=Arl11 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.875e-31 Identity = 64/151 (42.38%), Postives = 98/151 (64.90%), Query Frame = 2 Query: 101 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYE 550 +++M+GLD AGKTTILYKLK +V T+PT+GFNVE +E ++S T+WD+GGQ ++R W+ Y + L++V+DS D R+ EA EL +L + + LV ANKQ+ P+A+ EI ++L L + W +++ A +G+GL E Sbjct: 12 QVVMLGLDCAGKTTILYKLKGNRLVDTLPTVGFNVEPLEAPGHVSLTLWDIGGQTQLRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELEEVLEDPNMAGVPFLVLANKQEAPDALPLLEIRNRLDLERFQDHCWELRACSALTGQGLQE 162
BLAST of CX295868 vs. ExPASy Swiss-Prot
Match: ARL6_CAEEL (ADP-ribosylation factor-like protein 6 OS=Caenorhabditis elegans GN=arl-6 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.753e-30 Identity = 75/179 (41.90%), Postives = 110/179 (61.45%), Query Frame = 2 Query: 59 FTKLFSRLFA--KKEMRILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 577 F S LF KK++ I++VGLD +GKTTIL +LK E + +PT+G V +N+SF +D+ GQ K R W YF ++QG+IFV+DS+DR R+ +DEL ++ ++ R +++ ANK D+P AM A++IT LGL+ R W I STCA +G+GL + + LS I Sbjct: 3 FFSSLSSLFGLGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRLRMELLKDELMMVMEHKDVVSRGIPIVILANKMDIPGAMTASDITVALGLNLYRSGTWSIHSTCALTGDGLDKAMQQLSAEI 181
BLAST of CX295868 vs. ExPASy Swiss-Prot
Match: ARL17_HUMAN (ADP-ribosylation factor-like protein 17 OS=Homo sapiens GN=ARL17 PE=1 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 7.077e-29 Identity = 60/87 (68.97%), Postives = 69/87 (79.31%), Query Frame = 2 Query: 47 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQG 307 MG F KLF L KK+MRIL++ LD AGKTTILYKLKLGE V +PT+GF VETVEYKN +F VWDVG KIRPLW+H+FQNT+G Sbjct: 1 MGNIFEKLFKSLLGKKKMRILILSLDTAGKTTILYKLKLGETVPAVPTVGFCVETVEYKNNTFAVWDVGSHFKIRPLWQHFFQNTKG 87
BLAST of CX295868 vs. ExPASy Swiss-Prot
Match: ARL8B_RAT (ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus GN=Arl8b PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.335e-27 Identity = 56/166 (33.73%), Postives = 100/166 (60.24%), Query Frame = 2 Query: 71 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 565 F LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++++D+ DR++I +R+ELH +L++ +L+ +LV NK+DLPNA++ ++ +K+ L +++ R S + + L WL Sbjct: 12 FRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 177
BLAST of CX295868 vs. ExPASy Swiss-Prot
Match: ARL8B_MOUSE (ADP-ribosylation factor-like protein 8B OS=Mus musculus GN=Arl8b PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.335e-27 Identity = 56/166 (33.73%), Postives = 100/166 (60.24%), Query Frame = 2 Query: 71 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 565 F LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++++D+ DR++I +R+ELH +L++ +L+ +LV NK+DLPNA++ ++ +K+ L +++ R S + + L WL Sbjct: 12 FRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 177
BLAST of CX295868 vs. ExPASy Swiss-Prot
Match: ARL8B_HUMAN (ADP-ribosylation factor-like protein 8B OS=Homo sapiens GN=ARL8B PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.335e-27 Identity = 56/166 (33.73%), Postives = 100/166 (60.24%), Query Frame = 2 Query: 71 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 565 F LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++++D+ DR++I +R+ELH +L++ +L+ +LV NK+DLPNA++ ++ +K+ L +++ R S + + L WL Sbjct: 12 FRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 177
BLAST of CX295868 vs. ExPASy Swiss-Prot
Match: AR8BA_DANRE (ADP-ribosylation factor-like protein 8B-A OS=Danio rerio GN=arl8ba PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.335e-27 Identity = 56/166 (33.73%), Postives = 100/166 (60.24%), Query Frame = 2 Query: 71 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 565 F LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ V N++ +WD+GGQ + R +W Y + ++++VD+ DR+++ +R+ELH +L++ +L+ +LV NK+DLPNA++ ++ +K+ L +++ R S + + L WL Sbjct: 12 FKSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMVDAADREKVEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLAAIQDREICCYSISCKEKDNIDITLQWL 177
BLAST of CX295868 vs. ExPASy Swiss-Prot
Match: ARL8B_MACFA (ADP-ribosylation factor-like protein 8B OS=Macaca fascicularis GN=ARL8B PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.743e-27 Identity = 56/166 (33.73%), Postives = 100/166 (60.24%), Query Frame = 2 Query: 71 FSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 565 F LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++++D+ DR++I +R+ELH +L++ +L+ +LV NK+DLPNA++ ++ +K+ L +++ R S + + L WL Sbjct: 12 FRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRYRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 177 The following BLAST results are available for this feature:
BLAST of CX295868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 217
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295868 ID=CX295868; Name=CX295868; organism=Citrus clementina; type=EST; length=717bpback to top |