CX295878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA1A_ORYSJ (Importin subunit alpha-1a OS=Oryza sativa subsp. japonica GN=Os01g0253300 PE=1 SV=2) HSP 1 Score: 291.582 bits (745), Expect = 2.800e-78 Identity = 157/212 (74.06%), Postives = 174/212 (82.08%), Query Frame = 1 Query: 13 PGMLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGKPEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVC 627 P M+ GV+SDD+ LQLEATT FRKLL PP E+VIQSGVV RFV+FLTRED PQLQ EAA ALTNIAS ENT VVID GAVPIFVKLL S SDDVRE+AVWALGN+A SP+ RDLVL+ AL+PLLAQLN+H K SMLRNAT TLS FC+GKP+P F+Q RPALPALA+L+HSND +VL AC ALS LSDGTNDKIQAVIEA VC Sbjct: 75 PAMIGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTRPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVC 286
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA_SOLLC (Importin subunit alpha OS=Solanum lycopersicum PE=2 SV=2) HSP 1 Score: 280.411 bits (716), Expect = 6.454e-75 Identity = 151/212 (71.23%), Postives = 169/212 (79.72%), Query Frame = 1 Query: 13 PGMLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGKPEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVC 627 P ++AGVWSDDS LQLE TT FRKLL PP E+VIQSGVV RFVEFL R+D PQLQ EAA ALTNIAS ENT VVID G+VPIF++LLSSPSDDVRE+AVWALGNIA SP+ RDLVL AL+ LLAQ N+ AK SMLRNAT TLS FC+GKP+P F+Q + ALP L +L+HSND +VL AC ALS LSDGTNDKIQAVIEA VC Sbjct: 76 PELIAGVWSDDSSLQLECTTQFRKLLSIERNPPIEEVIQSGVVPRFVEFLARDDYPQLQFEAAWALTNIASGTSENTKVVIDYGSVPIFIRLLSSPSDDVREQAVWALGNIAGDSPKYRDLVLGHGALVALLAQFNEQAKLSMLRNATWTLSNFCRGKPQPLFEQTKAALPTLGRLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVC 287
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA1_ARATH (Importin subunit alpha-1 OS=Arabidopsis thaliana GN=KAP1 PE=2 SV=2) HSP 1 Score: 270.011 bits (689), Expect = 8.723e-72 Identity = 146/209 (69.86%), Postives = 168/209 (80.38%), Query Frame = 1 Query: 19 MLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGKPEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADV 624 M+AGVWSDD LQLE+TT FRKLL PP E+VI +GVV RFVEFL +ED P +Q EAA ALTNIAS ++T VVID AVPIFV+LL+SPSDDVRE+AVWALGN+A SPR RDLVL AL+PLL QLN+HAK SMLRNAT TLS FC+GKP+P FDQV+PALPAL +L+HS+D +VL AC ALS LSDGTNDKIQ VI+A V Sbjct: 77 MVAGVWSDDPALQLESTTQFRKLLSIERSPPIEEVISAGVVPRFVEFLKKEDYPAIQFEAAWALTNIASGTSDHTKVVIDHNAVPIFVQLLASPSDDVREQAVWALGNVAGDSPRCRDLVLGCGALLPLLNQLNEHAKLSMLRNATWTLSNFCRGKPQPHFDQVKPALPALERLIHSDDEEVLTDACWALSYLSDGTNDKIQTVIQAGV 285
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA1B_ORYSJ (Importin subunit alpha-1b OS=Oryza sativa subsp. japonica GN=Os05g0155500 PE=1 SV=2) HSP 1 Score: 266.159 bits (679), Expect = 1.260e-70 Identity = 144/211 (68.25%), Postives = 166/211 (78.67%), Query Frame = 1 Query: 13 PGMLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGKPEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADV 624 P M+ V SDDS +QLEATT FRKLL PP E+VI +GVV RF+ FL RED PQLQ EAA ALTNIAS +NT VV++ GAVPIFVKLLSSPS+DVRE+AVWALGN+A SP+ RDLVL+ L PLL QLN+HAK SMLRNAT TLS FC+GKP+P F+QV+PAL AL +L+HS D +VL AC ALS LSDGTNDKIQAVIE+ V Sbjct: 81 PAMVQAVQSDDSAVQLEATTQFRKLLSIERSPPIEEVINTGVVPRFIAFLQREDYPQLQFEAAWALTNIASGTSDNTKVVVESGAVPIFVKLLSSPSEDVREQAVWALGNVAGDSPKCRDLVLASGGLYPLLQQLNEHAKLSMLRNATWTLSNFCRGKPQPNFEQVKPALSALQRLIHSQDEEVLTDACWALSYLSDGTNDKIQAVIESGV 291
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA2_ARATH (Importin subunit alpha-2 OS=Arabidopsis thaliana GN=KAP2 PE=1 SV=2) HSP 1 Score: 252.292 bits (643), Expect = 1.882e-66 Identity = 136/211 (64.45%), Postives = 163/211 (77.25%), Query Frame = 1 Query: 13 PGMLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGKPEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADV 624 P M+AG+WS+DS QLEAT RKLL PP +V+QSGVV R V+FL+R+D P+LQ EAA ALTNIAS ENTNV+I+ GAVPIF++LLSS S+DVRE+AVWALGN+A SP+ RDLVLS A+ PLL+Q N++ K SMLRNAT TLS FC+GKP P F+Q +PALP L +LV S D +VL AC ALS LSD +NDKIQAVIEA V Sbjct: 78 PAMVAGIWSEDSNSQLEATNLLRKLLSIEQNPPINEVVQSGVVPRVVKFLSRDDFPKLQFEAAWALTNIASGTSENTNVIIESGAVPIFIQLLSSASEDVREQAVWALGNVAGDSPKCRDLVLSYGAMTPLLSQFNENTKLSMLRNATWTLSNFCRGKPPPAFEQTQPALPVLERLVQSMDEEVLTDACWALSYLSDNSNDKIQAVIEAGV 288
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMAB_DICDI (Importin subunit alpha-B OS=Dictyostelium discoideum GN=DDB_G0272318 PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.012e-56 Identity = 125/216 (57.87%), Postives = 157/216 (72.69%), Query Frame = 1 Query: 7 EFPGMLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHA--KPSMLRNATKTLSRFCQGKPEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVC 627 + P ++A + S++ L L++TT FRKLL PP E+VI++G+V R V+FL +D PQLQ EAA ALTNIAS E T VVI+ GA+ +FV LLSSP DDVRE+AVWALGNIA S RDLVLS AL PLL+ L A K SM+RNAT TLS FC+GKP+PPF+ VR +LP LA+L++ D +VL AC ALS LSDG+N++IQ VI+A VC Sbjct: 68 QLPSLVAEINSENPDLILKSTTAFRKLLSIEKSPPIEEVIKTGIVPRLVKFLYMQDFPQLQFEAAWALTNIASGTPEQTRVVIENGAIQVFVLLLSSPHDDVREQAVWALGNIAGDSHYCRDLVLSHNALPPLLSLLQNPAAIKVSMVRNATWTLSNFCRGKPQPPFEIVRASLPVLAKLIYYQDEEVLIDACWALSYLSDGSNERIQEVIDAKVC 283
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA7_MOUSE (Importin subunit alpha-7 OS=Mus musculus GN=Kpna6 PE=1 SV=2) HSP 1 Score: 194.126 bits (492), Expect = 6.083e-49 Identity = 116/212 (54.72%), Postives = 146/212 (68.87%), Query Frame = 1 Query: 19 MLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQS-GVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVC 627 M+ ++SDDS LQL T FRKLL PP ++VI + GVV RFVEFL R +N LQ EAA ALTNIAS + T +VI+ GAVPIF++LL+S +DV+E+AVWALGNIA S RD VL+ L PLL L K + +M RNA LS C+GK P P F +V P LP L++L+ S+D+D+L AC ALS LSDG N+KIQAVI++ VC Sbjct: 85 MVEMLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINTPGVVDRFVEFLKRNENCTLQFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSLCRDYVLNCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSSDSDLLADACWALSYLSDGPNEKIQAVIDSGVC 296
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA7_BOVIN (Importin subunit alpha-7 OS=Bos taurus GN=KPNA6 PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.019e-48 Identity = 115/212 (54.25%), Postives = 145/212 (68.40%), Query Frame = 1 Query: 19 MLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQS-GVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVC 627 M+ ++SDD LQL T FRKLL PP ++VI + GVV RFVEFL R +N LQ EAA ALTNIAS + T +VI+ GAVPIF++LL+S +DV+E+AVWALGNIA S RD VL+ L PLL L K + +M RNA LS C+GK P P F +V P LP L++L+ S+D+D+L AC ALS LSDG N+KIQAVI++ VC Sbjct: 85 MVEMLFSDDPDLQLATTQKFRKLLSKEPSPPIDEVINTPGVVDRFVEFLKRNENCTLQFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVCRDYVLNCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSSDSDLLADACWALSYLSDGPNEKIQAVIDSGVC 296
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA7_PONAB (Importin subunit alpha-7 OS=Pongo abelii GN=KPNA6 PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 6.726e-48 Identity = 115/212 (54.25%), Postives = 145/212 (68.40%), Query Frame = 1 Query: 19 MLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQSG-VVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVC 627 M+ ++SDDS LQL T FRKLL PP ++VI + VV RFVEFL R +N LQ EAA ALTNIAS + T +VI+ GAVPIF++LL+S +DV+E+AVWALGNIA S RD VL+ L PLL L K + +M RNA LS C+GK P P F +V P LP L++L+ S+D+D+L AC ALS LSDG N+KIQAVI++ VC Sbjct: 85 MVEMLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINTPRVVDRFVEFLKRNENCTLQFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVCRDYVLNCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSSDSDLLADACWALSYLSDGPNEKIQAVIDSGVC 296
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA7_HUMAN (Importin subunit alpha-7 OS=Homo sapiens GN=KPNA6 PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 6.726e-48 Identity = 115/212 (54.25%), Postives = 145/212 (68.40%), Query Frame = 1 Query: 19 MLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQSG-VVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVC 627 M+ ++SDDS LQL T FRKLL PP ++VI + VV RFVEFL R +N LQ EAA ALTNIAS + T +VI+ GAVPIF++LL+S +DV+E+AVWALGNIA S RD VL+ L PLL L K + +M RNA LS C+GK P P F +V P LP L++L+ S+D+D+L AC ALS LSDG N+KIQAVI++ VC Sbjct: 85 MVEMLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINTPRVVDRFVEFLKRNENCTLQFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVCRDYVLNCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSSDSDLLADACWALSYLSDGPNEKIQAVIDSGVC 296 The following BLAST results are available for this feature:
BLAST of CX295878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295878 ID=CX295878; Name=CX295878; organism=Citrus clementina; type=EST; length=706bpback to top |