CX295878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA1_CHICK (Importin subunit alpha-1 OS=Gallus gallus GN=KPNA1 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.957e-47 Identity = 117/212 (55.19%), Postives = 140/212 (66.04%), Query Frame = 1 Query: 19 MLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQS-GVVARFVEFLTREDNPQLQLEAARALTNIASEN---TNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVC 627 M+ ++S+ QL AT FRKLL PP ++VI + GVVARFVEFL R++N LQ EAA LTNIAS N T +VI GAVPIF++LLSS +DV+E+AVWALGNIA S RD VL L PLL L+K + +M RNA LS C+GK P P F +V P L L+ L+ ND DVL AC ALS LSDG NDKIQAVI+A VC Sbjct: 87 MIEMIFSNSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFEAAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLLSKQNRITMTRNAVWALSNLCRGKNPPPDFAKVSPCLSVLSWLLFVNDTDVLADACWALSYLSDGPNDKIQAVIDAGVC 298
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA1_SCHPO (Importin subunit alpha-1 OS=Schizosaccharomyces pombe GN=cut15 PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.657e-46 Identity = 107/214 (50.00%), Postives = 146/214 (68.22%), Query Frame = 1 Query: 7 EFPGMLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIASENTN---VVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADV 624 + P +L ++SDD Q++AT FRK L PP +KVI +GVV RFVEFL+ E+N L+ EA+ ALTN+AS ++N VV++ AVP+FV LLSS DVRE+AVWALGNIA SP RD VL L PLL + + + SMLRN+T TLS C+GK P+P ++ + +P L++L+++ D DVL A A+S LSDG N+KIQA+I+A + Sbjct: 79 QLPDLLKALYSDDIEAQIQATAKFRKALSKETNPPIQKVIDAGVVPRFVEFLSHENN-LLKFEASWALTNVASGSSNQTHVVVEANAVPVFVSLLSSSEQDVREQAVWALGNIAGDSPMCRDHVLQCGVLEPLLNIIESNRRLSMLRNSTWTLSNMCRGKNPQPDWNSISQVIPVLSKLIYTLDEDVLVDALWAISYLSDGANEKIQAIIDAGI 291
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA1_BOVIN (Importin subunit alpha-1 OS=Bos taurus GN=KPNA1 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 6.295e-46 Identity = 114/212 (53.77%), Postives = 139/212 (65.57%), Query Frame = 1 Query: 19 MLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQS-GVVARFVEFLTREDNPQLQLEAARALTNIASEN---TNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVC 627 M+ ++S+ QL AT FRKLL PP ++VI + GVVARFVEFL R++N LQ E+A LTNIAS N T +VI GAVPIF++LLSS +DV+E+AVWALGNIA S RD VL L PLL +K + +M RNA LS C+GK P P F +V P L L+ L+ +D DVL AC ALS LSDG NDKIQAVI+A VC Sbjct: 87 MIEMIFSNSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDKIQAVIDAGVC 298
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA1_PONAB (Importin subunit alpha-1 OS=Pongo abelii GN=KPNA1 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.074e-45 Identity = 114/212 (53.77%), Postives = 138/212 (65.09%), Query Frame = 1 Query: 19 MLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQS-GVVARFVEFLTREDNPQLQLEAARALTNIASEN---TNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVC 627 M+ ++S QL AT FRKLL PP ++VI + GVVARFVEFL R++N LQ E+A LTNIAS N T +VI GAVPIF++LLSS +DV+E+AVWALGNIA S RD VL L PLL +K + +M RNA LS C+GK P P F +V P L L+ L+ +D DVL AC ALS LSDG NDKIQAVI+A VC Sbjct: 87 MIEMIFSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDKIQAVIDAGVC 298
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA1_HUMAN (Importin subunit alpha-1 OS=Homo sapiens GN=KPNA1 PE=1 SV=2) HSP 1 Score: 183.341 bits (464), Expect = 1.074e-45 Identity = 114/212 (53.77%), Postives = 138/212 (65.09%), Query Frame = 1 Query: 19 MLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQS-GVVARFVEFLTREDNPQLQLEAARALTNIASEN---TNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVC 627 M+ ++S QL AT FRKLL PP ++VI + GVVARFVEFL R++N LQ E+A LTNIAS N T +VI GAVPIF++LLSS +DV+E+AVWALGNIA S RD VL L PLL +K + +M RNA LS C+GK P P F +V P L L+ L+ +D DVL AC ALS LSDG NDKIQAVI+A VC Sbjct: 87 MIEMIFSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDKIQAVIDAGVC 298
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA1_RAT (Importin subunit alpha-1 OS=Rattus norvegicus GN=Kpna1 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.402e-45 Identity = 113/208 (54.33%), Postives = 137/208 (65.87%), Query Frame = 1 Query: 31 VWSDDSGLQLEATTWFRKLLL----PPSEKVIQS-GVVARFVEFLTREDNPQLQLEAARALTNIASEN---TNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVC 627 ++S+ QL AT FRKLL PP ++VI + GVVARFVEFL R++N LQ E+A LTNIAS N T +VI GAVPIF++LLSS +DV+E+AVWALGNIA S RD VL L PLL +K + +M RNA LS C+GK P P F +V P L L+ L+ +D DVL AC ALS LSDG NDKIQAVI+A VC Sbjct: 91 IFSNSPEQQLSATQKFRKLLSKEPNPPIDEVINTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDKIQAVIDAGVC 298
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA5_HUMAN (Importin subunit alpha-6 OS=Homo sapiens GN=KPNA5 PE=1 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 3.124e-45 Identity = 112/212 (52.83%), Postives = 142/212 (66.98%), Query Frame = 1 Query: 19 MLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQS-GVVARFVEFLTREDNPQLQLEAARALTNIASE---NTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVC 627 M+ ++S+++ QL AT FRKLL PP ++VIQ GVV RFV+FL R +N LQ EAA ALTNIAS +T VVI+ GAVPIF+KLL+S +DV+E+AVWALGNIA + RD VL+ + L PLL L + + RNA LS C+GK P P F +V P L L++L+ S+D DVL C ALS LSDG NDKIQAVI++ VC Sbjct: 85 MVQMIFSNNADQQLTATQKFRKLLSKEPNPPIDQVIQKPGVVQRFVKFLERNENCTLQFEAAWALTNIASGTFLHTKVVIETGAVPIFIKLLNSEHEDVQEQAVWALGNIAGDNAECRDFVLNCEILPPLLELLTNSNRLTTTRNAVWALSNLCRGKNPPPNFSKVSPCLNVLSRLLFSSDPDVLADVCWALSYLSDGPNDKIQAVIDSGVC 296
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA1_MOUSE (Importin subunit alpha-1 OS=Mus musculus GN=Kpna1 PE=1 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 5.329e-45 Identity = 113/208 (54.33%), Postives = 137/208 (65.87%), Query Frame = 1 Query: 31 VWSDDSGLQLEATTWFRKLLL----PPSEKVIQS-GVVARFVEFLTREDNPQLQLEAARALTNIASEN---TNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVC 627 ++S+ QL AT FRKLL PP ++VI + GVVARFVEFL R++N LQ E+A LTNIAS N T VI GAVPIF++LLSS +DV+E+AVWALGNIA S RD VL+ L PLL +K + +M RNA LS C+GK P P F +V P L L+ L+ +D DVL AC ALS LSDG NDKIQAVI+A VC Sbjct: 91 IFSNSPEQQLSATQKFRKLLSKEPNPPIDEVINTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRNVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLNCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDKIQAVIDAGVC 298
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA2_SCHPO (Importin subunit alpha-2 OS=Schizosaccharomyces pombe GN=imp1 PE=1 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.187e-44 Identity = 112/212 (52.83%), Postives = 138/212 (65.09%), Query Frame = 1 Query: 7 EFPGMLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKP-SMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIE 615 EFP + A V SDD LQL A T FRK L PP ++VI GVV RFV+FL E + LQ EAA ALTNIAS + T +V+D GAVP F++LLSSP DVRE+ VWALGNIA S RD VL L PLL L A SMLRNAT TLS C+GK P P + + A+P LA+L++S D +++ AC A+S LSDG N+KI A+++ Sbjct: 78 EFPKLTADVMSDDIELQLGAVTKFRKYLSKETHPPIDQVIACGVVDRFVQFLESEHH-LLQFEAAWALTNIASGTTDQTRIVVDSGAVPRFIQLLSSPEKDVREQVVWALGNIAGDSSACRDYVLGNGVLQPLLNILQSSASDVSMLRNATWTLSNLCRGKNPPPNWSTISVAVPILAKLLYSEDVEIIVDACWAISYLSDGPNEKIGAILD 288
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA5_RAT (Importin subunit alpha-6 OS=Rattus norvegicus GN=Kpna5 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.025e-44 Identity = 110/212 (51.89%), Postives = 141/212 (66.51%), Query Frame = 1 Query: 19 MLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQS-GVVARFVEFLTREDNPQLQLEAARALTNIASE---NTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVC 627 M+ ++S+++ QL AT FRKLL PP ++VIQ GVV RFV+FL R +N LQ EAA ALTNIAS +T VVI+ GAVPIF++LL+S +DV+E+AVWALGNIA + RD VL+ + L PLL L + + RNA LS C+GK P P F +V P L L++L+ S+D DVL C ALS LSDG NDKIQ VI++ VC Sbjct: 85 MIQMIFSNNAEQQLTATQKFRKLLSKEPNPPIDQVIQKPGVVQRFVKFLERNENCTLQFEAAWALTNIASGTFLHTKVVIETGAVPIFIRLLTSEHEDVQEQAVWALGNIAGDNAECRDFVLNCEILPPLLELLTNSNRLTTTRNAVWALSNLCRGKNPPPNFSKVSPCLNVLSRLLFSSDPDVLADVCWALSYLSDGPNDKIQVVIDSGVC 296 The following BLAST results are available for this feature:
BLAST of CX295878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295878 ID=CX295878; Name=CX295878; organism=Citrus clementina; type=EST; length=706bpback to top |