CX295878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA5_DANRE (Importin subunit alpha-6 OS=Danio rerio GN=kpna5 PE=2 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 1.714e-43 Identity = 111/208 (53.37%), Postives = 138/208 (66.35%), Query Frame = 1 Query: 31 VWSDDSGLQLEATTWFRKLLL----PPSEKVIQS-GVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVC 627 ++S+D QL AT FRKLL PP ++VI + GVV RFVEFL R DN LQ EAA ALTNIAS ++T VVI+ GAVPIF++LL+S +DV+E+AVWALGNIA + RD VL+ L L L K + + RNA LS C+GK P P F +V P L L++L+ S+D DVL AC ALS LSDG NDKIQ VI++ VC Sbjct: 89 IFSEDPDQQLIATQKFRKLLSKEPNPPIDEVIGTPGVVNRFVEFLRRSDNCTLQFEAAWALTNIASGTFQHTKVVIETGAVPIFIELLNSEYEDVQEQAVWALGNIAGDNAECRDYVLNCGILPSLQQLLAKSNRLTTTRNAVWALSNLCRGKNPPPDFAKVSPCLSVLSRLLFSSDPDVLADACWALSYLSDGPNDKIQTVIDSGVC 296
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA1_YEAST (Importin subunit alpha OS=Saccharomyces cerevisiae GN=SRP1 PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.233e-42 Identity = 104/214 (48.60%), Postives = 136/214 (63.55%), Query Frame = 1 Query: 7 EFPGMLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQG-KPEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADV 624 E P M + SDD QL AT FR++L PP + VIQ+GVV R VEF+ LQLEAA ALTNIAS T VV+D AVP+F++LL + S +V+E+A+WALGN+A S RD VL A+ P+L N + KPS++R AT TLS C+G KP+P + V ALP LA+L++S D + L AC A+S LSDG + IQAVI+ + Sbjct: 88 ELPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSN-KPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRI 300
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA1_XENLA (Importin subunit alpha-1 OS=Xenopus laevis GN=kpna1 PE=1 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 5.162e-40 Identity = 92/210 (43.81%), Postives = 127/210 (60.48%), Query Frame = 1 Query: 19 MLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADV 624 ++ G+ S D +L T RK+L PP +I++G++ + VEFL+R DN LQ EAA ALTNIAS + T V+DGGA+P F+ L+SSP + E+AVWALGNIA P RD +++ + PLLA +N LRN T LS C+ K P PP V LP L QL+H +D D+L C A+S L+DG+ND+I V++ + Sbjct: 78 IVQGMNSGDPENELRCTQAARKMLSRERNPPLNDIIEAGLIPKLVEFLSRHDNSTLQFEAAWALTNIASGTSDQTKSVVDGGAIPAFISLISSPHLHISEQAVWALGNIAGDGPLYRDALINCNVIPPLLALVNPQTPLGYLRNITWMLSNLCRNKNPYPPMSAVLQILPVLTQLMHHDDKDILSDTCWAMSYLTDGSNDRIDVVVKTGI 287
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA2_MOUSE (Importin subunit alpha-2 OS=Mus musculus GN=Kpna2 PE=1 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 3.346e-39 Identity = 97/217 (44.70%), Postives = 134/217 (61.75%), Query Frame = 1 Query: 19 MLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSM-------LRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADV 624 ++ G+ S++ QL+AT RKLL PP + +I++G++ +FV FL + D +Q E+A ALTNIAS E T V+DGGA+P F+ LL+SP + E+AVWALGNIA RDLV+ A+ PLLA L A P + LRN T TLS C+ K P PP D V LP L +L+H ND +VL +C A+S L+DG N++I+ V++ V Sbjct: 81 IVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALL---AVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGV 294
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA2_HUMAN (Importin subunit alpha-2 OS=Homo sapiens GN=KPNA2 PE=1 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.831e-38 Identity = 98/217 (45.16%), Postives = 131/217 (60.37%), Query Frame = 1 Query: 19 MLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSM-------LRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADV 624 ++ G+ S + QL+AT RKLL PP + +I++G++ +FV FL R D +Q E+A ALTNIAS E T V+DGGA+P F+ LL+SP + E+AVWALGNIA RDLV+ A+ PLLA L A P M LRN T TLS C+ K P PP D V LP L +L+H +D +VL C A+S L+DG N++I V++ V Sbjct: 81 IVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALL---AVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGV 294
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA2_XENLA (Importin subunit alpha-2 OS=Xenopus laevis GN=kpna2 PE=1 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 6.310e-38 Identity = 90/207 (43.48%), Postives = 125/207 (60.39%), Query Frame = 1 Query: 19 MLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIE 615 ++ G+ S D+ +L +T RK+L PP +I++G++ + VEFL+ +N LQ EAA ALTNIAS + T V+DGGA+P F+ L+SSP + E+AVWALGNIA P RD ++S + PLL +N LRN T TLS C+ K P PP V LP L QL+ D D+L C A+S L+DG+ND+I V++ Sbjct: 78 IVQGMNSGDNENELRSTQAARKMLSKERNPPLNDIIEAGLIPKLVEFLSYHNNSTLQFEAAWALTNIASGTSDQTKSVVDGGAIPAFISLISSPHLHISEQAVWALGNIAGDGPLYRDALISCNVIPPLLTLVNPQTPLGYLRNITWTLSNLCRNKNPYPPMSAVLQILPVLTQLMLHEDKDILSDTCWAMSYLTDGSNDRIDVVVK 284
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA4_MOUSE (Importin subunit alpha-4 OS=Mus musculus GN=Kpna4 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.522e-36 Identity = 89/204 (43.63%), Postives = 124/204 (60.78%), Query Frame = 1 Query: 37 SDDSGLQLEATTWFRKLLL----PPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADV 624 SD+ G+QL A RKLL PP + +I+SG++ V L R+DNP LQ EAA ALTNIAS E T V+ AVP+F++LL SP +V E+AVWALGNI P+ RD V+S + PLL+ ++ + LRN T + C+ K P PP + ++ LPAL L+H D ++L ALS L+D N++IQ VI++ + Sbjct: 82 SDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALSYLTDAGNEQIQMVIDSGI 285
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA4_HUMAN (Importin subunit alpha-4 OS=Homo sapiens GN=KPNA4 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.522e-36 Identity = 89/204 (43.63%), Postives = 124/204 (60.78%), Query Frame = 1 Query: 37 SDDSGLQLEATTWFRKLLL----PPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADV 624 SD+ G+QL A RKLL PP + +I+SG++ V L R+DNP LQ EAA ALTNIAS E T V+ AVP+F++LL SP +V E+AVWALGNI P+ RD V+S + PLL+ ++ + LRN T + C+ K P PP + ++ LPAL L+H D ++L ALS L+D N++IQ VI++ + Sbjct: 82 SDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHTDVNILVDTVWALSYLTDAGNEQIQMVIDSGI 285
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA3_MOUSE (Importin subunit alpha-3 OS=Mus musculus GN=Kpna3 PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.718e-35 Identity = 91/210 (43.33%), Postives = 126/210 (60.00%), Query Frame = 1 Query: 19 MLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADV 624 +L SD+ +QL A RKLL PP + +I+SG++ V+ L R+DNP LQ EAA ALTNIAS T V+ AVP+F++LL SP +V E+AVWALGNI P+ RD V+S + PLL+ +N + LRN T + C+ K P PP + V+ LPAL L++ D ++L ALS L+DG N++IQ VI++ V Sbjct: 76 ILQNATSDNPVVQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVKCLERDDNPSLQFEAAWALTNIASGTSAQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFINPSIPITFLRNVTWVIVNLCRNKDPPPPMETVQEILPALCVLIYHTDINILVDTVWALSYLTDGGNEQIQMVIDSGV 285
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA3_HUMAN (Importin subunit alpha-3 OS=Homo sapiens GN=KPNA3 PE=1 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 6.529e-35 Identity = 90/210 (42.86%), Postives = 126/210 (60.00%), Query Frame = 1 Query: 19 MLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADV 624 +L SD+ +QL A RKLL PP + +I+SG++ V+ L R+DNP LQ EAA ALTNIAS T V+ AVP+F++LL SP +V E+AVWALGNI P+ RD V+S + PLL+ ++ + LRN T + C+ K P PP + V+ LPAL L++ D ++L ALS L+DG N++IQ VI++ V Sbjct: 76 ILQNATSDNPVVQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVKCLERDDNPSLQFEAAWALTNIASGTSAQTQAVVQSNAVPLFLRLLRSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPITFLRNVTWVIVNLCRNKDPPPPMETVQEILPALCVLIYHTDINILVDTVWALSYLTDGGNEQIQMVIDSGV 285 The following BLAST results are available for this feature:
BLAST of CX295878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295878 ID=CX295878; Name=CX295878; organism=Citrus clementina; type=EST; length=706bpback to top |