CX295878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA8_HUMAN (Importin subunit alpha-8 OS=Homo sapiens GN=KPNA7 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.240e-34 Identity = 94/210 (44.76%), Postives = 125/210 (59.52%), Query Frame = 1 Query: 19 MLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADV 624 ++ GV S D L +AT RK+L PP + VI++G++ R VEFL P LQ EAA ALTNIAS E T V++GGA+ ++LLSS + V E+AVWALGNIA P RD V++ A+ LLA ++ + LRN T TLS C+ K P P V+ LPAL L+ D++VL AC ALS L+DG+N +I V+ V Sbjct: 75 IIKGVNSSDPVLCFQATQTARKMLSQEKNPPLKLVIEAGLIPRMVEFLKSSLYPCLQFEAAWALTNIASGTSEQTRAVVEGGAIQPLIELLSSSNVAVCEQAVWALGNIAGDGPEFRDNVITSNAIPHLLALISPTLPITFLRNITWTLSNLCRNKNPYPCDTAVKQILPALLHLLQHQDSEVLSDACWALSYLTDGSNKRIGQVVNTGV 284
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA_DROME (Importin subunit alpha OS=Drosophila melanogaster GN=Pen PE=1 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.608e-33 Identity = 90/209 (43.06%), Postives = 120/209 (57.42%), Query Frame = 1 Query: 19 MLAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEAD 621 ++A + S+D Q RK+L PP + +I G+V + FL +N LQ EAA ALTNIAS + T VI+ AVP FV LL S S ++ E+AVWALGNIA RD+V+ + +L +N S LRN +S C+ K P PPFDQV+ LP L+QL+ S D VL AC ALS ++D N KIQAV+++D Sbjct: 74 IVAAMNSEDQERQFLGMQSARKMLSRERNPPIDLMIGHGIVPICIRFLQNTNNSMLQFEAAWALTNIASGTSDQTRCVIEHNAVPHFVALLQSKSMNLAEQAVWALGNIAGDGAAARDIVIHHNVIDGILPLINNETPLSFLRNIVWLMSNLCRNKNPSPPFDQVKRLLPVLSQLLLSQDIQVLADACWALSYVTDDDNTKIQAVVDSD 282
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA1A_DICDI (Probable importin subunit alpha-A OS=Dictyostelium discoideum GN=DDB_G0273149 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.568e-31 Identity = 86/231 (37.23%), Postives = 133/231 (57.58%), Query Frame = 1 Query: 1 VGEFPGMLAGVWSDDSGLQLEATTWFRKLL----LPPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIASEN---TNVVIDGGAVPIFVKLL-SSPSDDVREKAVWALGNIARSSPRDRDLVL---SEKALIPLL----------AQLNKHAKPSMLRNATKTLSRFCQGKPEPPFDQVRPALPALAQLVHSND--NDVLRYACEALSCLSDGTNDKIQAVIEADV 624 + PG++ + S+D + FRKLL PP ++VI+ G++ + + L + +NP++Q E+A ALTNIAS N T V++ G+VPIF++LL + +D+V+E+ WALGNIA + R+ +L + ALIPLL N K +++N T+S C+GKP+P F V LPA+ +L+ + +++ C ALS L DG N KIQAVI++ V Sbjct: 82 IKNLPGLVTALNSNDQAYVYSSLVQFRKLLSIHAYPPIDQVIECGIIPKLNQLL-QCNNPKVQFESAWALTNIASGNNRQTQTVMESGSVPIFIQLLCAETTDEVKEQCAWALGNIAGDTVDSRNYLLKYGAMNALIPLLHYGEDNGATTTSANSERKIGLIQNVVWTISNLCRGKPQPDFSVVSQCLPAINELIRIENLPSEIYGDLCWALSYLCDGPNTKIQAVIDSGV 311
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA3_CAEEL (Importin subunit alpha-3 OS=Caenorhabditis elegans GN=ima-3 PE=1 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 9.757e-31 Identity = 91/209 (43.54%), Postives = 117/209 (55.98%), Query Frame = 1 Query: 22 LAGVWSDDSGLQLEATTWFRKLLL----PPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADV 624 +A S D QL A RK+L PP + +I SG++ V+ L+ D P LQ EAA ALTNIAS E T V++ GAVP+F++LLS + +V E++VWALGNI P RD L L PLL +N LRN T + C+ K P P VR LPAL+ L+H D ++L ALS L+DG N+ IQ VIEA V Sbjct: 71 VAAAQSSDPAEQLTAVQQARKMLSTDRNPPIDDLIGSGILPVLVQCLSSTD-PNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLLSCGNLNVCEQSVWALGNIIGDGPHFRDYCLELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVVRTILPALSLLIHHQDTNILIDTVWALSYLTDGGNEHIQMVIEAQV 278
BLAST of CX295878 vs. ExPASy Swiss-Prot
Match: IMA2_CAEEL (Importin subunit alpha-2 OS=Caenorhabditis elegans GN=ima-2 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 61/184 (33.15%), Postives = 98/184 (53.26%), Query Frame = 1 Query: 94 PPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVL---SEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADV 624 PP ++VI G++ V+ L+ E N ++Q EAA ALTNI S E T ++ G + L S + E+A+WA+ NIA S + RD V+ +AL+ L+ ++++ S +R S C+ K P P + +R L +LV D V + AC A+S L+DG +++I+ E+ V Sbjct: 123 PPIDEVIHCGLLQALVQALSVE-NERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQISEQALWAVANIAGDSSQLRDYVIKCHGVEALMHLMEKVDQ-LGDSHVRTIAWAFSNMCRHKNPHAPLEVLRVLSKGLVKLVQHTDRQVRQDACWAVSYLTDGPDEQIELARESGV 304 The following BLAST results are available for this feature:
BLAST of CX295878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295878 ID=CX295878; Name=CX295878; organism=Citrus clementina; type=EST; length=706bpback to top |