CX295882

Overview
NameCX295882
Unique NameCX295882
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 5.577e-93
Identity = 159/240 (66.25%), Postives = 177/240 (73.75%), Query Frame = 2
Query:    5 QAGGAVCPGGLCCSKFGFCGNTPAYCTNG-CQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKG-FYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718
            QAGGA+C  GLCCSKFG+CGNT  YC  G CQSQC G                             +F+Q+L HRND ACQGKG FY+Y+AFI+AA SF  FGTTG+   RKREIAAF AQTSHETTGGW +APDGPYAWGYCF +EQG+PGDYC PS QWPCAPG+KYFGRGPIQIS+NYNYGP G+AI VDLL NPD VA D  ISFK+A WFWMT QSPKPSCHDVITG+W+ S  D
Sbjct:   24 QAGGALCASGLCCSKFGWCGNTNDYCGPGNCQSQCPGGSPGDLGGVIS----------------NSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTD 247          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 9.512e-93
Identity = 155/239 (64.85%), Postives = 175/239 (73.22%), Query Frame = 2
Query:    5 QAGGAVCPGGLCCSKFGFCGNTPAYCTNG-CQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718
            Q GG  C  G CCSKFG+CGNT  YC +G CQSQC G                             +F+Q+LKHRN+ +CQGK FY+Y+AFI AA SF  FGT+G+ + RKREIAAF AQTSHETTGGW +APDGPYAWGYCF +E+GNPGDYC PS QWPCAPG+KYFGRGPIQIS+NYNYGP G+AI VDLL NPD VA DP ISFKTA WFWMT QSPKPSCHDVI G+W  S+AD
Sbjct:   32 QGGGKACASGQCCSKFGWCGNTNDYCGSGNCQSQCPGGGPGPGPGGDLGSAIS-----------NSMFDQMLKHRNENSCQGKNFYSYNAFINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPGDYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSAD 259          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2)

HSP 1 Score: 338.961 bits (868), Expect = 1.623e-92
Identity = 156/239 (65.27%), Postives = 177/239 (74.06%), Query Frame = 2
Query:    5 QAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQ-GNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718
            QAGGA+CP  LCCS++G+CG+T  YC  GCQSQCSG                             LF+Q+L HRND AC  KGFYTYDAF+AAAN++  F TTG+ DT KRE+AAFLAQTSHETTGGWPTAPDGPY+WGYCFK+E  GN   YC+P  +WPCA GKKY+GRGPIQI+YNYNYGPAG+AI  DLL NPD VA+D T+SFKTAFWFWMT QSPKPSCH VITGQW  SA D
Sbjct:   24 QAGGALCPNCLCCSQYGWCGSTSDYCGAGCQSQCSGGCGGGPTPPSSGGGSGVASIISP-----SLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADD 257          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 3.615e-92
Identity = 158/240 (65.83%), Postives = 180/240 (75.00%), Query Frame = 2
Query:    5 QAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQ-GNPG-DYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718
            QAGGA+CP  LCCS++G+CG+T AYC +GCQSQCSG                           R LF+Q+L HRNDAAC  K FYTYDAF+AAAN+F +F TTG+  TRKRE+AAFLAQTSHETTGGW TAPDGPY+WGYCFK+E  GN G DYC  S QWPCA GKKY+GRGPIQISYNYNYGPAG+AI  +LL NPD VA+D T+SFKTAFWFWMT QSPKPSCH V+TGQW  +  D
Sbjct:   26 QAGGALCPNCLCCSQYGWCGSTSAYCGSGCQSQCSGSCGGGGPTPPSGGGGSGVASIVS----RSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGND 261          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1)

HSP 1 Score: 337.421 bits (864), Expect = 4.721e-92
Identity = 150/238 (63.03%), Postives = 172/238 (72.27%), Query Frame = 2
Query:    5 QAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718
            QAGGA+CP  LCCS +G+CG+T  YC +GCQSQC G                           ++LFEQLL HRNDAAC  +GFYTYDA + AA +F  F  TG+ + RKRE+AAFL QTSHETTGGW TAPDGPY+WGYCFK+E G    YC PS +WPCAP KKYFGRGPIQ+SYNYNYGPAG+AI  DLL NP+ VA+DP +SFKTA WFWMT QSPKPSCHDVITGQW  S+ D
Sbjct:   29 QAGGALCPNCLCCSSYGWCGSTSDYCGDGCQSQCDGCGGGGGGGGGGGGGGGGGGGAVEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGD 266          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2)

HSP 1 Score: 337.035 bits (863), Expect = 6.166e-92
Identity = 157/238 (65.97%), Postives = 175/238 (73.53%), Query Frame = 2
Query:    5 QAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718
            QAGGA+CPGGLCCSKFG+CG+T  YC +GCQSQCSG                            D F  +LKHRND ACQGK FYTYDAF++AA +F  F   G+T T+KREIAAFL QTSHETTGGWPTAPDGPYAWGYCF +EQ NP  YCQ S ++PCA GK+Y+GRGPIQIS+NYNYG  G+AI VDLL NPD VA DP ISFKTA WFWMT QSPKPSCHDVITG W  S+AD
Sbjct:   26 QAGGALCPGGLCCSKFGWCGSTSEYCGDGCQSQCSGSSGGGTLSSLISG---------------DTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAFPNFANKGDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQ-NPSTYCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSAD 247          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 7.537e-90
Identity = 152/240 (63.33%), Postives = 171/240 (71.25%), Query Frame = 2
Query:    2 RQAGGAVCPGGLCCSKFGFCGNTPAYCTNG-CQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718
            +QAGGA CP G+CCS FG+CGNT  YC  G CQSQC                               +F+Q+LKHRND  CQGK FYTY+AFI AA SF  FGTTG+T  RKRE+AAF AQTSHETTGGW TAPDG YAWGYC+ +EQGNP  YC  S QWPCAPG+KY+GRGPIQISYNYNYGP G+AI  +LL NPD VA +  +SFK+A WFWMT QSPKPSCHDVITG+W  SAAD
Sbjct:   28 KQAGGARCPSGMCCSNFGWCGNTQDYCGPGKCQSQCPSGPGPTPRPPTPTPGPSTGDISNIISS--SMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPSAAD 265          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 9.843e-90
Identity = 151/240 (62.92%), Postives = 171/240 (71.25%), Query Frame = 2
Query:    2 RQAGGAVCPGGLCCSKFGFCGNTPAYCTN-GCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718
            RQAGGA+CP GLCCS+FG+CG+T AYC   GCQSQC G                           R  F+ +LKHRND AC  +GFYTYDAFI AA SF  FGTTG+T TRK+EIAAF  QTSHETTGGW TAPDGPY+WGYCFKQEQ    +YC PS +WPCA GK Y+GRGP+Q+S+NYNYG  G+AI  DLL NPD V+NDP I+FK A WFWMT QSPKPSCH VI GQW+ S AD
Sbjct:   25 RQAGGALCPNGLCCSEFGWCGDTEAYCKQPGCQSQCGGTPPGPTGDLSGIIS-------------RSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDAD 251          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 2.864e-89
Identity = 150/239 (62.76%), Postives = 174/239 (72.80%), Query Frame = 2
Query:    5 QAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAADT 721
            QAGGAVCP GLCCSKFGFCG+T  YC +GCQSQC                               LF+Q+LK+RND  C G GFYTYDAFIAAA SF  FGTTG+ +T+K+E+AAFLAQTSHETTGGWPTAPDGPYAWGYCF  EQ     YC P + WPCAPGKKY+GRGPIQ+++NYNYG AG+AI  DL+ NPD ++ +PT+SFKTA WFWMT Q+ KPS HDVITG+W  SAAD+
Sbjct:   29 QAGGAVCPNGLCCSKFGFCGSTDPYCGDGCQSQCKSSPTPTIPTPSTGGGDVGRLVPS------SLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSP-KDWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADS 260          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3)

HSP 1 Score: 326.25 bits (835), Expect = 1.088e-88
Identity = 149/240 (62.08%), Postives = 170/240 (70.83%), Query Frame = 2
Query:    2 RQAGGAVCPGGLCCSKFGFCGNTPAYCTN-GCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718
            RQAGGA+CP GLCCS+FG+CGNT  YC   GCQSQC+                               F+ +LKHRNDAAC  +GFYTY+AFI AA SF  FGTTG+T TRK+E+AAF  QTSHETTGGW TAPDGPY+WGYCFKQEQ    DYC+PS  WPCA GK+Y+GRGP+Q+S+NYNYG  G+AI VDLL NPD VAND  I+FK A WFWMT Q PKPSCH VI GQW+ S AD
Sbjct:   38 RQAGGALCPNGLCCSEFGWCGNTEPYCKQPGCQSQCT-----------PGGTPPGPTGDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDAD 266          
The following BLAST results are available for this feature:
BLAST of CX295882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
CHI2_SOLTU5.577e-9366.25Endochitinase 2 (Fragment) OS=Solanum tuberosum GN... [more]
CHIT_SOLTU9.512e-9364.85Endochitinase OS=Solanum tuberosum PE=2 SV=1[more]
CHI3_ORYSJ1.623e-9265.27Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI1_ORYSJ3.615e-9265.83Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI9_ORYSJ4.721e-9263.03Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI2_PEA6.166e-9265.97Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=... [more]
CHI3_TOBAC7.537e-9063.33Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3... [more]
CHI2_BRANA9.843e-9062.92Endochitinase CH25 OS=Brassica napus PE=2 SV=1[more]
CHIX_PEA2.864e-8962.76Endochitinase OS=Pisum sativum PE=2 SV=1[more]
CHIB_ARATH1.088e-8862.08Basic endochitinase B OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC05076H06SK DroRLeaf1 Citrus clementina cDNA clone C05076H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295882 ID=CX295882; Name=CX295882; organism=Citrus clementina; type=EST; length=735bp
GAGGCAGGCTGGAGGAGCTGTATGTCCAGGAGGACTGTGTTGCAGCAAAT
TTGGCTTCTGCGGCAACACTCCTGCTTATTGCACCAATGGCTGCCAAAGC
CAGTGCAGTGGGTCACCCTCACCCACGCCGACTAATCCGACTCCCGTACC
TGCTCCAAGCGGCGGCGGGAACAATATCGGTTCACTAATTAGCAGGGACC
TATTTGAACAGCTGTTGAAGCATCGTAATGATGCTGCTTGCCAAGGAAAA
GGTTTTTACACTTACGACGCTTTCATCGCTGCCGCCAATTCCTTTGGTGC
CTTCGGAACAACCGGTAACACCGATACTCGCAAAAGAGAAATCGCGGCCT
TTTTGGCTCAAACTTCACATGAAACTACAGGTGGCTGGCCTACTGCGCCC
GATGGTCCATATGCATGGGGATATTGCTTCAAGCAGGAGCAAGGAAACCC
TGGAGATTATTGTCAACCAAGTCAACAATGGCCATGTGCACCTGGGAAAA
AGTATTTTGGCCGAGGTCCCATCCAGATTTCATACAACTACAACTACGGT
CCAGCAGGAAAAGCCATAAACGTTGACTTGCTTCGCAACCCAGATGCTGT
GGCAAATGATCCTACTATTTCGTTCAAGACTGCTTTCTGGTTCTGGATGA
CCCGACAGTCACCAAAACCTTCATGCCACGATGTTATCACAGGCCAATGG
AAAGCATCAGCCGCCGATACTCAGCTGGTCGCCTT
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