CX295882

Overview
NameCX295882
Unique NameCX295882
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 4.136e-88
Identity = 151/239 (63.18%), Postives = 173/239 (72.38%), Query Frame = 2
Query:    2 RQAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718
            RQAGGA+CPGG CCS+FG+CG+T  YC  GCQSQC G                           R  F+Q+LKHRND AC  KGFYTYDAFIAAA ++ +FG TG+T TRKREIAAFL QTSHETTGGW TAPDGPYAWGYCF +E+ NP  YC  + Q+PCAPG++Y+GRGPIQIS+NYNYG  G+AI VDLL  PD VA D  ISFK+A WFWMT QSPKPS HDVIT +W  S+AD
Sbjct:   32 RQAGGALCPGGNCCSQFGWCGSTTDYCGPGCQSQCGGPSPAPTDLSALIS--------------RSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRER-NPSTYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSAD 255          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2)

HSP 1 Score: 323.939 bits (829), Expect = 5.401e-88
Identity = 153/241 (63.49%), Postives = 171/241 (70.95%), Query Frame = 2
Query:    5 QAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTG-NTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPG--DYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718
            QAGGAVCP  LCCS+FG+CG+T  YC  GCQSQCS                            R LF+Q+L HRNDAAC    FYTYDAF+AAA++F  F   G + DT KRE+AAFLAQTSHETTGGW TAPDGPYAWGYCFK+E G     DYCQ S QWPCA GKKY+GRGPIQ+SYN+NYGPAG+AI  DLL +PD VA+D T+SF TAFWFWMT QSPKPSCH V TGQW  SA D
Sbjct:   27 QAGGAVCPNCLCCSQFGWCGSTSDYCGAGCQSQCSAAGCGGGGPTPPSGSGGSGVASIVS---RSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADD 264          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.203e-87
Identity = 154/243 (63.37%), Postives = 175/243 (72.02%), Query Frame = 2
Query:    2 RQAGGAVCPGGLCCSKFGFCGNTPAYCT--NGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGG--WPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718
            RQAGGA+CPGGLCCS+FG+CGNT  YC   NGCQSQCSG                           R+ F+Q+L HRND  C  +GFYTYDAFIAAA SF AF TTG+  TRKRE+AAFLAQTSHETTGG  W  APDGPY WGYC+ +E  NP DYCQ    +PCAPGK+YFGRGP+Q+++NYNYG  G+AI VDLL NPD +A DPTISFK+AFWFWMT QSPKPSCHDVI G W  S +D
Sbjct:   26 RQAGGALCPGGLCCSQFGWCGNTDDYCKKENGCQSQCSGSGGDTGGLDSLIT--------------RERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGW-AAPDGPYTWGYCYNREL-NPADYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSD 252          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 2.681e-87
Identity = 150/239 (62.76%), Postives = 172/239 (71.97%), Query Frame = 2
Query:    2 RQAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718
            RQAGGA+CPGG CCS+FG+CG+T  YC   CQSQC G                           R  F+Q+LKHRND AC  KGFYTYDAFIAAA ++ +FG TG+T TRKREIAAFL QTSHETTGGW TAPDGPYAWGYCF +E+ NP  YC  + Q+PCAPG++Y+GRGPIQIS+NYNYG  G+AI VDLL  PD VA D  ISFK+A WFWMT QSPKPS HDVIT +W  S+AD
Sbjct:   31 RQAGGALCPGGNCCSQFGWCGSTTDYCGKDCQSQCGGPSPAPTDLSALIS--------------RSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRER-NPSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSAD 254          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 320.472 bits (820), Expect = 5.972e-87
Identity = 152/242 (62.81%), Postives = 175/242 (72.31%), Query Frame = 2
Query:    2 RQAGGAVCPGGLCCSKFGFCGNTPAYCT-NGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGG--WPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718
            RQAGGA+CPGGLCCS+FG+CG+T  YCT  GCQSQCSG                           R+ F Q+L HRND AC  +GFYTYDAFIAAA SF AF TTG+  TRKREIAAFLAQTSHETTGG  W  APDGPYAWGYC+ +E   P  YC     +PCAPGK+YFGRGP+Q+S+NYNYG  G+AI VDLL NPD +++DPTISFK+AFWFWMT QSPKPSCH+VI G W  S++D
Sbjct:    5 RQAGGALCPGGLCCSQFGWCGSTADYCTVPGCQSQCSGSGPAPGPGGLTNLIS------------RETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGW-AAPDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSD 233          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 5.972e-87
Identity = 152/242 (62.81%), Postives = 175/242 (72.31%), Query Frame = 2
Query:    2 RQAGGAVCPGGLCCSKFGFCGNTPAYCT-NGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGG--WPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718
            RQAGGA+CPGGLCCS+FG+CG+T  YCT  GCQSQCSG                           R+ F Q+L HRND AC  +GFYTYDAFIAAA SF AF TTG+  TRKREIAAFLAQTSHETTGG  W  APDGPYAWGYC+ +E   P  YC     +PCAPGK+YFGRGP+Q+S+NYNYG  G+AI VDLL NPD +++DPTISFK+AFWFWMT QSPKPSCH+VI G W  S++D
Sbjct:   27 RQAGGALCPGGLCCSQFGWCGSTADYCTVPGCQSQCSGSGPAPGPGGLTNLIS------------RETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGW-AAPDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSD 255          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 2.871e-81
Identity = 132/176 (75.00%), Postives = 149/176 (84.66%), Query Frame = 2
Query:  194 RDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAADT 721
            ++LFE++L HRND AC  KGFYTY+AFI A  +F AFGTTG+T+TR +EIAAFLAQTSHETTGGW TAPDGPY+WGYC+ +EQG+PGDYC  SQQWPCAPGKKYFGRGPIQISYNYNYG AG AI V+LL NPD VAND  +SFKTA WFWMT Q PKPS HDVITG+W  S AD+
Sbjct:   11 KNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADS 186          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 6.395e-81
Identity = 130/172 (75.58%), Postives = 148/172 (86.05%), Query Frame = 2
Query:  203 FEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718
            F+++L HRND ACQ KGFYTYDAF+AAAN+F  FG TG+TD RKR++AAFLAQTSHETTGGW TAPDG +AWGYCFKQE+G   DYC PS QWPCAPGK+Y+GRGPIQ+S+NYNYGPAG+AI VDLLRNPD VA DPT+SFKTA WFWMT Q+PKPS H VITG+W  S AD
Sbjct:   34 FDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGAD 205          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.618e-78
Identity = 124/176 (70.45%), Postives = 150/176 (85.23%), Query Frame = 2
Query:  194 RDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAADT 721
            R +F+Q+LKHRN+ AC  KGFYTYDAF+AAA SF +FGTTG+TD RKRE+AAFL QTSHETTGGWP+APDGPYAWGYCF +E+    +YC PS ++PCAPGK Y+GRGP+Q+S+NYNYGP G+A+ V+LL NPD VA D  +SFKTA WFWMT Q+PKPSCHDV+TG+W+ SAADT
Sbjct:    8 RSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSAADT 183          
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.474e-77
Identity = 127/175 (72.57%), Postives = 143/175 (81.71%), Query Frame = 2
Query:  194 RDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718
            R  F+++L HRND ACQ KGFYTYDAF+AAA +F  FGTTG+ D +KRE+AAFLAQTSHETTGGW TAPDG +AWGYCFKQE+G   DYC PS QWPCAPGK+Y+GRGPIQ+S+NYNYGPAG+AI VDLL NPD VA D T+ FKTA WFWMT Q PKPS H VI GQW  S AD
Sbjct:   31 RAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGAD 205          
The following BLAST results are available for this feature:
BLAST of CX295882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
CHIT_PHAVU4.136e-8863.18Endochitinase OS=Phaseolus vulgaris PE=1 SV=1[more]
CHI12_ORYSJ5.401e-8863.49Chitinase 12 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHI1_THECC1.203e-8763.37Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 S... [more]
CHI5_PHAVU2.681e-8762.76Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1[more]
CHI2_GOSHI5.972e-8762.81Endochitinase 2 (Fragment) OS=Gossypium hirsutum P... [more]
CHI1_GOSHI5.972e-8762.81Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1[more]
CHID_SOLLC2.871e-8175.00Basic endochitinase (Fragment) OS=Solanum lycopers... [more]
CHIC_SECCE6.395e-8175.58Basic endochitinase C OS=Secale cereale GN=rscc PE... [more]
CHIT_CARPA6.618e-7870.45Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHI2_HORVU1.474e-7772.5726 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC05076H06SK DroRLeaf1 Citrus clementina cDNA clone C05076H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295882 ID=CX295882; Name=CX295882; organism=Citrus clementina; type=EST; length=735bp
GAGGCAGGCTGGAGGAGCTGTATGTCCAGGAGGACTGTGTTGCAGCAAAT
TTGGCTTCTGCGGCAACACTCCTGCTTATTGCACCAATGGCTGCCAAAGC
CAGTGCAGTGGGTCACCCTCACCCACGCCGACTAATCCGACTCCCGTACC
TGCTCCAAGCGGCGGCGGGAACAATATCGGTTCACTAATTAGCAGGGACC
TATTTGAACAGCTGTTGAAGCATCGTAATGATGCTGCTTGCCAAGGAAAA
GGTTTTTACACTTACGACGCTTTCATCGCTGCCGCCAATTCCTTTGGTGC
CTTCGGAACAACCGGTAACACCGATACTCGCAAAAGAGAAATCGCGGCCT
TTTTGGCTCAAACTTCACATGAAACTACAGGTGGCTGGCCTACTGCGCCC
GATGGTCCATATGCATGGGGATATTGCTTCAAGCAGGAGCAAGGAAACCC
TGGAGATTATTGTCAACCAAGTCAACAATGGCCATGTGCACCTGGGAAAA
AGTATTTTGGCCGAGGTCCCATCCAGATTTCATACAACTACAACTACGGT
CCAGCAGGAAAAGCCATAAACGTTGACTTGCTTCGCAACCCAGATGCTGT
GGCAAATGATCCTACTATTTCGTTCAAGACTGCTTTCTGGTTCTGGATGA
CCCGACAGTCACCAAAACCTTCATGCCACGATGTTATCACAGGCCAATGG
AAAGCATCAGCCGCCGATACTCAGCTGGTCGCCTT
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