CX295882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 280.411 bits (716), Expect = 6.849e-75 Identity = 136/245 (55.51%), Postives = 155/245 (63.27%), Query Frame = 2 Query: 2 RQAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXX----RDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAADTQ 724 RQAG A+CPGGLCCS +G+CG T YC GCQSQC G + F+ LLK RNDA C GFYTY+AFI+AA F FG TG+ RKREIAAFL QTSHETTGGWP AP GPYAWGYC+ +E N YC PS + C GK+Y GRGPIQ+S+NYNYG G + + LL+ P+ V DP ISFKTA WFWM QSPKPSCH VITG W SAAD + Sbjct: 27 RQAGDALCPGGLCCSSYGWCGTTVDYCGIGCQSQCDGGGGGDGGDDGCDGGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEI-NCQPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLE 270
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 9.889e-74 Identity = 131/243 (53.91%), Postives = 161/243 (66.26%), Query Frame = 2 Query: 2 RQAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQC--SGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSP-KPSCHDVITGQWKASAADT 721 RQAGGA CP LCCS++G+CG T YC GCQSQC S D FE++L HR+DAAC +GFY Y AF+AAA +F AF TG+ DTRKRE+AAFLAQTSH T+GG PY+WGYC+K+ +G D+C P+ +WPCAPGK Y RGP+QI+YNYNYG AG+AI DLL NP+ VA DPT++FKTA W WMT +SP +PS H V+TGQW + AD+ Sbjct: 37 RQAGGARCPNRLCCSRWGWCGLTDDYCKGGCQSQCRVSRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGG-------PYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADS 272
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 9.889e-74 Identity = 131/243 (53.91%), Postives = 161/243 (66.26%), Query Frame = 2 Query: 2 RQAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQC--SGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSP-KPSCHDVITGQWKASAADT 721 RQAGGA CP LCCS++G+CG T YC GCQSQC S D FE++L HR+DAAC +GFY Y AF+AAA +F AF TG+ DTRKRE+AAFLAQTSH T+GG PY+WGYC+K+ +G D+C P+ +WPCAPGK Y RGP+QI+YNYNYG AG+AI DLL NP+ VA DPT++FKTA W WMT +SP +PS H V+TGQW + AD+ Sbjct: 37 RQAGGARCPNRLCCSRWGWCGLTDDYCKGGCQSQCRVSRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGG-------PYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADS 272
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.139e-60 Identity = 103/174 (59.20%), Postives = 126/174 (72.41%), Query Frame = 2 Query: 200 LFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPS-QQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718 L+ L H++DAAC +GFYTY +F+ AA F F TG D RKRE+AAFLAQ SHETTGGW TAPDGPYAWG C+K+E YC + +QWPC PGK Y GRGPIQIS+N+NYGPAG+A+ D LRNP+ VAN I+F+TA WFWMT + KPSCH V+ G+++ AD Sbjct: 57 LYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPAD 230
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.880e-59 Identity = 111/243 (45.68%), Postives = 136/243 (55.97%), Query Frame = 2 Query: 5 QAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQP--SQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSP-KPSCHDVITGQWKASAADTQ 724 QAG A CP LCCS G+CG T AYC GC SQC +FEQ+L +RN+ +C GKGFYTYDA+ A + FG TG+ DTRKRE+AAF AQTS ET+G D P+ WGYC E DYC P +PC Y+GRGP+Q+ +NYNYG G + +LL P+ VA DP +SF+ A WFWM S PSCH+VITG+W S AD + Sbjct: 29 QAGNATCPNDLCCSSGGYCGLTVAYCCAGCVSQCRNCFFT-----------------------ESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCV--ADYYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIE 246
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.931e-57 Identity = 113/173 (65.32%), Postives = 122/173 (70.52%), Query Frame = 2 Query: 200 LFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718 LFE++L HR GFYTYDAFIAAA SF AF TTG+TD RKRE+AAFLAQTSHETTGGWPTAPDGPY E G+ DY FGRGPIQISYNYNYG AGKAI VDLLRNPD V +D T+ FKTA WFWMT QSPKPS HDVITG+W S+ D Sbjct: 9 LFEKMLLHR--------GFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPY--------ELGSTSDY---------------FGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTD 150
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.435e-56 Identity = 102/175 (58.29%), Postives = 122/175 (69.71%), Query Frame = 2 Query: 194 RDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718 R +FE +L HR D CQG FYTYDAFI AA F FGTTGN +TR+RE+AAF QTSHETTGGW TAPDGP+AWGYC + + P D Y+GRGPIQ+++ YNY AG A+ +DL+ NPD V++DP ++F+TA WFWMT QSPKPSCHDVIT QW S D Sbjct: 33 RAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYC-RVNEITPSD-------------PPYYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDD 192
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 215.312 bits (547), Expect = 2.706e-55 Identity = 110/242 (45.45%), Postives = 130/242 (53.72%), Query Frame = 2 Query: 2 RQAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRD-LFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAADTQ 724 +QAG A+CPGGLCCS +G+CG T YC +GCQSQC G + +F+ +LK+RND C GFYTY+AFI+AA F FG TG+ RKREIAAFL QTSHET G WP A Y WGYC NYNYG G +N+ LL+ P+ V DP I+FKTA WFWMT QSPKPSCH VIT W SAAD++ Sbjct: 26 QQAGDALCPGGLCCSSYGWCGTTADYCGDGCQSQCDGGGGGGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYC----------------------------------HMNYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSE 233
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.615e-55 Identity = 110/175 (62.86%), Postives = 123/175 (70.29%), Query Frame = 2 Query: 197 DLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAADT 721 DLF+Q+LK+RNDA C FYTYDAFIAAANSF FGTTG+ RK+EIAAF QTSHETTGG +PDGPYA GYCF +E GN G Y+GRGPIQ++ NY AGKAI DL+ NPD VA D T+SFKTA WFWMT Q KPSCHDVITG+W SAADT Sbjct: 33 DLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLRE-GNQ-------------MGNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADT 192
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.485e-53 Identity = 107/174 (61.49%), Postives = 122/174 (70.11%), Query Frame = 2 Query: 197 DLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKPSCHDVITGQWKASAAD 718 DLF ++LK+RND C KGFYTYDAFIAAANSF FGTTG+ RK+EIAAF QTSHETTGG +A DGP+A GYCF +E GN G ++GRGPIQ++ NY AG+AI DL+ NPD VA D T+SFKTA WFWMT Q KPSCHDVITGQW SAAD Sbjct: 26 DLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVRE-GNQ-------------MGSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAAD 184 The following BLAST results are available for this feature:
BLAST of CX295882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295882 ID=CX295882; Name=CX295882; organism=Citrus clementina; type=EST; length=735bpback to top |