CX295882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.550e-39 Identity = 83/210 (39.52%), Postives = 108/210 (51.43%), Query Frame = 2 Query: 23 CPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQ-QWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWM 649 C +CCSKFG+CG T YC +GCQS F +K++ + C+GK FYT AF++A + F G+ KREIAAF A +HET +C+ E YC P++ QWPCA G+KY+GRGP+QIS+NYNYGPAG+AI D L +P VA D ++FK A WFWM Sbjct: 25 CQPNVCCSKFGYCGTTDEYCGDGCQS--------GPCRSGRGGGGSGGGGANVASVVTSSFFNGIKNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHETGH-------------FCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWM 213
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.154e-36 Identity = 84/217 (38.71%), Postives = 107/217 (49.31%), Query Frame = 2 Query: 23 CPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQE-QGNPGDYCQPSQ--QWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSP 664 C GLCCS++G+CG YC GCQ D ++ D+ C GK FYT DAF++A NS+ FG G+ D KREIAA A +HET +C+ +E G DYC Q+PC+ K Y GRGPIQ+S+N+NYGPAG A N D L P+ V+ND +SFKTA W+WM P Sbjct: 28 CAEGLCCSQYGYCGTGEDYCGTGCQQ-----------GPCTTASPPPSNNVNADILTADFLNGIIDQA-DSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHETGH-------------FCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWMQHVRP 219
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 2.813e-36 Identity = 84/216 (38.89%), Postives = 116/216 (53.70%), Query Frame = 2 Query: 23 CPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQE-QGNPGDYC-QPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSP 664 C LCCS+FG+CG+T AYC GC+S F + ++ C GK FYT D+FI AAN+F F N+ TR REIA A +HET +C+ +E G DYC + ++Q+PCAPGK YFGRGPIQ+S+NYNYG G+++N++LL P+ V+++PT++F+T WFWM P Sbjct: 29 CAPNLCCSQFGYCGSTDAYCGTGCRS---------GPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGGGCAGKNFYTRDSFINAANTFPNFA---NSVTR-REIATMFAHFTHETGH-------------FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP 218
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 1.069e-35 Identity = 81/212 (38.21%), Postives = 110/212 (51.89%), Query Frame = 2 Query: 38 CCSKFGFCGNTPAYCTNGCQS-----QCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQ-GNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTR 655 CCS+ G+CGN+ YC GCQ+ C G F + + A C GK FYT F+ A +++ FGT + RKREIAA+ A +HET C+ +E+ G+ +YCQ SQQ+PC P K+YFGRGP+Q+S+NYNY AGK ++ D L +PD V DP ISFKT+ WFW+ + Sbjct: 11 CCSQHGYCGNSYDYCGPGCQAGPCWDPCEGDGTLTVSDIVTQE-----------------FWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGH-------------LCYIEERDGHANNYCQESQQYPCNPNKEYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRK 192
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.543e-34 Identity = 91/218 (41.74%), Postives = 112/218 (51.38%), Query Frame = 2 Query: 23 CPGGLCCSKFGFCGNTPAYCTNG-CQS-QCSGXXXXXXXXXXXXXXXXXXXXXXXXXXX--RDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSFGAFGTTGNTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQ-GNPGD-YCQPSQ--QWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMT 652 C LCCS FGFCG YC G CQS C G + F+ ++ A+C GK FYT AF++A + FG G++D KREIAAF A SHETT C +E+ G+ GD YC + Q+PCA GKKY+GRGP+Q+S+NYNY AG+AI D L NP+ VA D SFK A WFWMT Sbjct: 32 CAPNLCCSNFGFCGTGTPYCGVGNCQSGPCEGGTPTTPTTPTTPTTPGTGGGGSSVSDIVSQAFFDGIIGQAA-ASCPGKNFYTRAAFLSAVDP--KFGNEGSSDDNKREIAAFFAHISHETTN-------------LCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT 233
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: CHIC_POPTR (Acidic endochitinase WIN6.2C (Fragment) OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.551e-18 Identity = 46/98 (46.94%), Postives = 53/98 (54.08%), Query Frame = 2 Query: 2 RQAGGAVCPGGLCCSKFGFCGNTPAYCTNGCQSQCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLFEQLLKHRNDAACQGKGFYTYDAFIAAANSF 295 RQAG A+CPGGLCCS +G+CG T YC +GCQSQC G + F+ LLK RND C GFYTYDAFI+AA F Sbjct: 27 RQAGDALCPGGLCCSFYGWCGTTVDYCGDGCQSQCDG---GDGCDGGGGGGGDGDDGYLSDIIPKSTFDALLKFRNDPRCHAVGFYTYDAFISAAKEF 121
BLAST of CX295882 vs. ExPASy Swiss-Prot
Match: IAMY_COILA (Alpha-amylase inhibitor/endochitinase (Fragments) OS=Coix lachryma-jobi PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.714e-17 Identity = 46/79 (58.23%), Postives = 53/79 (67.09%), Query Frame = 2 Query: 437 EQGNPGDYCQPSQ-QWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLRNPDAVANDPTISFKTAFWFWMTRQSPKP 670 E GN YC PS+ Q PCA GKKY+GRGPIQIS NYNYGPAG+AI +D L NPD VA D +KTA F + + P Sbjct: 30 ETGNNA-YCDPSKTQKPCAAGKKYYGRGPIQISXNYNYGPAGRAIGMDGLGNPDRVAQDALDDYKTALXFLVNGEEAVP 107 The following BLAST results are available for this feature:
BLAST of CX295882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295882 ID=CX295882; Name=CX295882; organism=Citrus clementina; type=EST; length=735bpback to top |