CX296262

Overview
NameCX296262
Unique NameCX296262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length520
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.680e-21
Identity = 67/167 (40.12%), Postives = 95/167 (56.89%), Query Frame = 3
Query:    9 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAK--GVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDEIMLPSDSGDADI 503
            E ++SDFG+ARLM+ +DTHLS  V+   G  GYV PEY ++   + KGDVYS+G VLLEL+TG+RPT+   +P+    NLV W+ Q +   ++ D  D  L+ +   ++ EL Q LKVA  C L      RPTM +V    + I       ++  I    D G + I
Sbjct: 1022 EARVSDFGMARLMSAMDTHLS--VSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD---SPDFGDNNLVGWVKQHAKL-RISDVFDPELMKEDPALEIELLQHLKVAVAC-LDDRAWRRPTMVQVMAMFKEIQAGSGIDSQSTIRSIEDGGFSTI 1181          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 4.806e-21
Identity = 55/143 (38.46%), Postives = 84/143 (58.74%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            F+  ++DFGL+RL+ P  TH++T +    G LGY+ PEY +  VAT +GDVYSFG V+LEL+TG+RP  V +        LV W+  +   G+ ++  D  L   G +  + + L +AC CV    P +RP + +V  +L+ I
Sbjct:  941 FKAYVADFGLSRLILPYRTHVTTEL---VGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGKRPMEVFR--PKMSRELVAWVHTMKRDGKPEEVFDTLLRESGNEEAMLRVLDIACMCVNQN-PMKRPNIQQVVDWLKNI 1077          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 8.198e-21
Identity = 62/146 (42.47%), Postives = 87/146 (59.59%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETF--KGNLVEWIAQLSSTGQLQDAIDKCLVA-KGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            F  ++SDFG+ARL++ +DTHLS  V+   G  GYV PEY ++   T KGDVYS+G +LLEL++G++P +    PE F    NLV W  QL    +  + +D  LV  K  D EL  +LK+A  C L   P +RPTM +V    + +
Sbjct:  997 FVARVSDFGMARLVSALDTHLS--VSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPID----PEEFGEDNNLVGWAKQLYREKRGAEILDPELVTDKSGDVELLHYLKIASQC-LDDRPFKRPTMIQVMTMFKEL 1135          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.115e-20
Identity = 63/161 (39.13%), Postives = 94/161 (58.39%), Query Frame = 3
Query:    9 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNE-LFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDEIMLPSDS 488
            E ++SDFGLA+L+   ++H++T V G FG   Y+APEY ++  AT K DVYSFG ++LE+++G+ PT+ +   + F  N+V W+  L S  + ++ +D  L  +GV+ E L   L +A  CV  + P ERPTM  V Q L           E E+M P  S
Sbjct:  440 EARVSDFGLAKLLEDEESHITTIVAGTFG---YLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGF--NIVGWLNFLISENRAKEIVD--LSCEGVERESLDALLSIATKCV-SSSPDERPTMHRVVQLL-----------ESEVMTPCPS 581          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.115e-20
Identity = 58/157 (36.94%), Postives = 90/157 (57.32%), Query Frame = 3
Query:    9 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKG---------------VDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            E ++SDFG+ARL++ +DTHLS  V+   G  GYV PEY ++   T KGDVYS G V+LE+++G+RPT+  +  +T   NLV W    +  G+  + ID+ L+ +G               +  E+ ++L++A  CV    P +RP M +V   LR +
Sbjct:  979 EARVSDFGMARLISALDTHLS--VSTLAGTPGYVPPEYYQSFRCTAKGDVYSIGVVMLEILSGKRPTDKEEFGDT---NLVGWSKMKAREGKHMEVIDEDLLKEGSSESLNEKEGFEGGVIVKEMLRYLEIALRCV-DDFPSKRPNMLQVVASLREL 1129          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.314e-20
Identity = 56/148 (37.84%), Postives = 85/148 (57.43%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYH 449
            F  K+SDFGLA+L++  ++H++T V G FG   YVAPEYA T +   K D+YSFG +LLE +TG  P +  +     + NLVEW+  +  T + ++ +D  L  +   + L + L V+  CV P   K RP M +V + L +    +H
Sbjct:  321 FNAKLSDFGLAKLLDSGESHITTRVMGTFG---YVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPAN--EVNLVEWLKMMVGTRRAEEVVDPRLEPRPSKSALKRALLVSLRCVDPEAEK-RPRMSQVARMLESDEHPFH 462          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.314e-20
Identity = 61/160 (38.12%), Postives = 93/160 (58.13%), Query Frame = 3
Query:    9 EPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDEIMLPSDS 488
            E ++SDFGLA+L+   ++H++T V G FG   Y+APEY ++  AT K DVYSFG ++LE+++G+RPT+ +   +    N+V W+  L S  + +D +D       +++ L   L +A  CV P+ P+ERPTM  V Q L           E E+M P  S
Sbjct:  442 EARVSDFGLAKLLEDEESHITTIVAGTFG---YLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGL--NVVGWLKFLISEKRPRDIVDPNCEGMQMES-LDALLSIATQCVSPS-PEERPTMHRVVQLL-----------ESEVMTPCPS 583          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 2.637e-19
Identity = 57/157 (36.31%), Postives = 90/157 (57.32%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG--ERYHFTTEDEI 470
            FE  + DFGLA+LM+  DTH++T V G    +G++APEY  T  ++ K DV+ +G +LLEL+TG+R  ++A+        L++W+  L    +L+  +D  L     D E+ Q ++VA  C   + P ERP M EV + L   G  ER+    ++E+
Sbjct:  428 FEAVVGDFGLAKLMDYKDTHVTTAVRGT---IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCT-QSSPMERPKMSEVVRMLEGDGLAERWEEWQKEEM 580          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.875e-19
Identity = 54/144 (37.50%), Postives = 84/144 (58.33%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG 437
            FE  + DFGLARLM+  DTH++T V G    +G++APEY  T  ++ K DV+ +G +LLEL+TG+R  ++A+        L++W+  L    +L+  +D  L +   + E+ Q ++VA  C   + P ERP M EV + L   G
Sbjct:  444 FEAVVGDFGLARLMDYKDTHVTTAVRGT---IGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVALLCT-QSSPMERPKMSEVVRMLEGDG 583          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 7.673e-19
Identity = 54/157 (34.39%), Postives = 92/157 (58.60%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIG--ERYHFTTEDEI 470
            FE  + DFGLA+LMN  D+H++T V G    +G++APEY  T  ++ K DV+ +G +LLEL+TG++  ++A+        L++W+ ++    +L+  +D  L  K V+ E+ Q +++A  C   +   ERP M EV + L   G  ER+    ++E+
Sbjct:  414 FEAVVGDFGLAKLMNYNDSHVTTAVRGT---IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCT-QSSAMERPKMSEVVRMLEGDGLAERWEEWQKEEM 566          
The following BLAST results are available for this feature:
BLAST of CX296262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
BRI1_ARATH3.680e-2140.12Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
PSYR1_ARATH4.806e-2138.46Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
BRL3_ARATH8.198e-2142.47Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
FEI2_ARATH3.115e-2039.13LRR receptor-like serine/threonine-protein kinase ... [more]
BRL2_ARATH3.115e-2036.94Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
Y2296_ARATH5.314e-2037.84Probable receptor-like protein kinase At2g42960 OS... [more]
FEI1_ARATH5.314e-2038.13LRR receptor-like serine/threonine-protein kinase ... [more]
BAK1_ARATH2.637e-1936.31BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
SERK2_ARATH5.875e-1937.50Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
SERK5_ARATH7.673e-1934.39Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionC05138A08SK FerrChloL1 Citrus clementina cDNA clone C05138A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296262 ID=CX296262; Name=CX296262; organism=Citrus clementina; type=EST; length=520bp
GAGGTTTTGAGCCCAAAATATCTGATTTCGGCCTTGCTAGGCTCATGAAC
CCAATTGATACTCATTTAAGTACCTTCGTGAATGGAGAGTTTGGGGATTT
GGGTTATGTTGCTCCGGAGTACGCAAGAACTCTTGTTGCCACACCGAAGG
GAGATGTTTACAGCTTTGGAACTGTGCTTCTTGAGTTGGTAACTGGTGAG
AGACCTACCAATGTGGCTAAAGCTCCTGAAACCTTTAAGGGAAATCTCGT
TGAATGGATTGCACAGCTGTCAAGTACCGGTCAACTTCAAGATGCTATTG
ATAAATGCTTGGTTGCGAAGGGCGTTGACAATGAGCTTTTTCAGTTCCTT
AAAGTTGCATGTAACTGTGTACTTCCAACCATCCCCAAGGAGAGGCCTAC
CATGTTTGAAGTATACCAGTTTCTAAGAGCTATTGGGGAGCGTTACCATT
TTACCACTGAAGACGAGATTATGCTGCCCTCAGACAGCGGTGATGCCGAT
ATTCTTGAAGAACTTATTGT
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