CX296262

Overview
NameCX296262
Unique NameCX296262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length520
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.956e-14
Identity = 53/138 (38.41%), Postives = 71/138 (51.45%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            PK++DFG+ARL N   T   T      G  GY+APEY R    + K DVYSFG VLLE++TG    N  +A          W+A     G+    ID  L ++   NE+ +F+ +   CV   + K RPTM  V Q+L
Sbjct:  478 PKVADFGMARLFNMDQTRAVT--RKVVGTFGYMAPEYVRNRTFSVKTDVYSFGVVLLEMITGRSNKNYFEALGLPAYAWKCWVA-----GEAASIIDHVL-SRSRSNEIMRFIHIGLLCVQENVSK-RPTMSLVIQWL 606          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.554e-14
Identity = 51/146 (34.93%), Postives = 77/146 (52.74%), Query Frame = 3
Query:    6 FEPKISDFGLARLM-NPIDTHLSTFVNGEFGDLGYVAPEYARTL--VATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            +EP++SDFGLA++  N +D  +        G  GY+ PE+ +    + TPK DVY FG VL EL+TG++P       E    NLV W+  L    Q   AID  +   G + ++ + LK+   C    +P +RP+M +V   L+ I
Sbjct:  710 WEPRLSDFGLAKVFGNGLDDEII------HGSPGYLPPEFLQPEHELPTPKSDVYCFGVVLFELMTGKKPIEDDYLDEK-DTNLVSWVRSLVRKNQASKAIDPKIQETGSEEQMEEALKIGYLCT-ADLPSKRPSMQQVVGLLKDI 847          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.554e-14
Identity = 48/133 (36.09%), Postives = 76/133 (57.14%), Query Frame = 3
Query:   15 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            K++DFGL+++ N  ++++S  + G FG   Y+ PEY +T   T K DVY+FG VLLE++   RP      P   + NL EW+    S G + + +D  L+ +   N L +F+++A  C L     ERP+M +V
Sbjct:  628 KVADFGLSKIHNQDESNISINIKGTFG---YLDPEYLQTHKLTEKSDVYAFGVVLLEVLFA-RPAIDPYLPHE-EVNLSEWVMFCKSKGTIDEILDPSLIGQIETNSLKKFMEIAEKC-LKEYGDERPSMRDV 754          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.554e-14
Identity = 57/146 (39.04%), Postives = 82/146 (56.16%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLST--FVNGEFGDLGYVAPEYAR-TLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            +E K+SD+GL + +  +D+   T  F N     +GY+APE A+ +L A+ K DVYS+G VLLELVTG +P  V    E     L +++  L  TG   D  D+ L  +  +NEL Q +K+   C     P +RP+M EV Q L +I
Sbjct:  739 YEAKLSDYGLEKFLPVMDSFGLTKKFHNA----VGYIAPELAQQSLRASEKCDVYSYGVVLLELVTGRKP--VESPSENQVLILRDYVRDLLETGSASDCFDRRL-REFEENELIQVMKLGLLCTSEN-PLKRPSMAEVVQVLESI 876          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.336e-14
Identity = 53/143 (37.06%), Postives = 83/143 (58.04%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPI--DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLR 428
            F+ K++DFGL+R   P+  +TH+ST V G     GY+ PEY RT     K DVYSFG VLLE++T  RP  + +  E  K ++  W+  + + G +++ +D  L        +++ L++A +CV P+  K RPTM +V   L+
Sbjct:  710 FQAKLADFGLSRSF-PVGGETHVSTAVAGT---PGYLDPEYYRTNRLNEKSDVYSFGIVLLEIIT-SRPV-IQQTRE--KPHIAAWVGYMLTKGDIENVVDPRLNRDYEPTSVWKALEIAMSCVNPSSEK-RPTMSQVTNELK 843          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.336e-14
Identity = 47/140 (33.57%), Postives = 74/140 (52.86%), Query Frame = 3
Query:   15 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            K++DFG+A++     +     ++G  G  GY+APEY  TL    K D+YSFG VLLELVTG++PT+     E    ++ +W+        L+  ID  L  K    E+ + + +   C  P +P  RP+M +V   L+ +
Sbjct:  834 KVADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTGKQPTD----SELGDKDMAKWVCTALDKCGLEPVIDPKLDLK-FKEEISKVIHIGLLCTSP-LPLNRPSMRKVVIMLQEV 967          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 3.336e-14
Identity = 52/153 (33.99%), Postives = 81/153 (52.94%), Query Frame = 3
Query:    9 EPKISDFGLARLMN---PIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNEL-----------FQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            E  + DFGLA+++      +T  +T   G +G   Y+APEYA +L AT K DVYS G VL+E+VTG+ PT      ET   ++V W+  +  T    +A +K      +D+EL           +Q L++A  C   + P+ERP+  +  ++L
Sbjct: 1092 EAHLGDFGLAKILTGNYDTNTESNTMFAGSYG---YIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTEAMFDEET---DMVRWVETVLDTPPGSEAREKL-----IDSELKSLLPCEEEAAYQVLEIALQCT-KSYPQERPSSRQASEYL 1232          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.357e-14
Identity = 49/140 (35.00%), Postives = 78/140 (55.71%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            FE KI+DFGL+R     +    T V G FG   Y+ PEY +T + + K DVYSFG VLLE+++G+   ++++       N+VEW + +   G ++  +D  L      +  ++ +++A +CV  T  KERP M +V   L
Sbjct:  696 FEAKIADFGLSRSFLIGNEAQPTVVAGTFG---YLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVIDLSRE----NCNIVEWTSFILENGDIESIVDPNLHQDYDTSSAWKVVELAMSCVNRT-SKERPNMSQVVHVL 827          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.357e-14
Identity = 52/137 (37.96%), Postives = 74/137 (54.01%), Query Frame = 3
Query:   15 KISDFGLARLMNPIDT--HLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCL--VAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            K+SDFGL+RL++  +T  + S    G  G LGY+ PEY R    T K DVYSFG VLLE+VT ++  +  +  E    NLV +I ++    +L + ID  L   A  +D +  Q L    +  L    + RP+M EV
Sbjct:  505 KVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDV--NLVMYINKMMDQERLTECIDPLLKKTANKIDMQTIQQLGNLASACLNERRQNRPSMKEV 639          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.357e-14
Identity = 48/134 (35.82%), Postives = 75/134 (55.97%), Query Frame = 3
Query:   15 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVY 416
            K+SDFG++R +   DTHL+T V G    +GYV PEY ++   T K DVYSFG +L+EL+TGE+P ++ +  E     L  +  +     +L + +D  +  +    E+    K+A  C L    + RPTM +V+
Sbjct:  530 KVSDFGISRSVAIDDTHLTTIVQGT---IGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKPVSLLRRQEV--RMLGAYFLEAMRNDRLHEILDARIKEECDREEVLAVAKLARRC-LSLNSEHRPTMRDVF 657          
The following BLAST results are available for this feature:
BLAST of CX296262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
CRK38_ARATH1.956e-1438.41Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
Y2242_ARATH2.554e-1434.93Probable LRR receptor-like serine/threonine-protei... [more]
Y2232_ARATH2.554e-1436.09Probable receptor-like protein kinase At2g23200 OS... [more]
Y1124_ARATH2.554e-1439.04Probable LRR receptor-like serine/threonine-protei... [more]
Y2289_ARATH3.336e-1437.06Probable LRR receptor-like serine/threonine-protei... [more]
RLK5_ARATH3.336e-1433.57Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
GSO2_ARATH3.336e-1433.99LRR receptor-like serine/threonine-protein kinase ... [more]
Y1755_ARATH4.357e-1435.00Probable LRR receptor-like serine/threonine-protei... [more]
WAKLQ_ARATH4.357e-1437.96Wall-associated receptor kinase-like 20 OS=Arabido... [more]
WAKLG_ARATH4.357e-1435.82Wall-associated receptor kinase-like 8 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionC05138A08SK FerrChloL1 Citrus clementina cDNA clone C05138A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296262 ID=CX296262; Name=CX296262; organism=Citrus clementina; type=EST; length=520bp
GAGGTTTTGAGCCCAAAATATCTGATTTCGGCCTTGCTAGGCTCATGAAC
CCAATTGATACTCATTTAAGTACCTTCGTGAATGGAGAGTTTGGGGATTT
GGGTTATGTTGCTCCGGAGTACGCAAGAACTCTTGTTGCCACACCGAAGG
GAGATGTTTACAGCTTTGGAACTGTGCTTCTTGAGTTGGTAACTGGTGAG
AGACCTACCAATGTGGCTAAAGCTCCTGAAACCTTTAAGGGAAATCTCGT
TGAATGGATTGCACAGCTGTCAAGTACCGGTCAACTTCAAGATGCTATTG
ATAAATGCTTGGTTGCGAAGGGCGTTGACAATGAGCTTTTTCAGTTCCTT
AAAGTTGCATGTAACTGTGTACTTCCAACCATCCCCAAGGAGAGGCCTAC
CATGTTTGAAGTATACCAGTTTCTAAGAGCTATTGGGGAGCGTTACCATT
TTACCACTGAAGACGAGATTATGCTGCCCTCAGACAGCGGTGATGCCGAT
ATTCTTGAAGAACTTATTGT
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