CX296262

Overview
NameCX296262
Unique NameCX296262
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length520
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.268e-13
Identity = 53/145 (36.55%), Postives = 75/145 (51.72%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIA-QLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGER 443
            P +SD GLA L    +  +ST V G FG   Y APE+A + + T K DVY+FG V+LEL+TG +P + ++     + +LV W   QL     L   +D  L        L +F  +   C+ P  P+ RP M EV Q L  + +R
Sbjct:  537 PHLSDSGLAALTPNTERQVSTQVVGSFG---YSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLDSSRT--RAEQSLVRWATPQLHDIDALSKMVDPSLNGMYPAKSLSRFADIIALCIQPE-PEFRPPMSEVVQQLVRLVQR 675          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.656e-13
Identity = 48/138 (34.78%), Postives = 79/138 (57.25%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPID--THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            F+ K++DFGL+R   PI+  TH+ST V G    +GY+ PEY RT   T K DVYSFG VLL ++T +   +  +     K ++ EW+  + + G ++   D  L+       +++ +++A +C+ P+    RPTM +V
Sbjct:  714 FDTKLADFGLSRSF-PIEGETHVSTVVAGT---IGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVIDQNRE----KRHIAEWVGGMLTKGDIKSITDPNLLGDYNSGSVWKAVELAMSCMNPS-SMTRPTMSQV 842          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 1.656e-13
Identity = 52/146 (35.62%), Postives = 83/146 (56.85%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPID--THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWI-AQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            ++ K+SDFGLA+L  P D  +H++T + G +G   Y APEY  T     K DV++FG VLLE++TG    N  K P   + +LV+W+  +LS+  +++  +DK +  +       +  ++  +C+ P  PK RP M EV + L  I
Sbjct:  230 YDAKLSDFGLAKL-GPADEKSHVTTRIMGTYG---YAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHN-TKRPRG-QESLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSCIEPD-PKNRPHMKEVVEVLEHI 368          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.162e-13
Identity = 48/138 (34.78%), Postives = 78/138 (56.52%), Query Frame = 3
Query:    6 FEPKISDFGLARLMNPI--DTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            F+ K+ DFGL+R   P+  +TH+ST V G     GY+ PEY RT   T K DV+SFG VLLE++T +   +  +     K ++ EW+    + G +++ +D  +      + L++ L++A +CV P+    RP M +V
Sbjct:  728 FQAKLGDFGLSRSF-PVGSETHVSTNVAGS---PGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTRE----KSHIGEWVGFKLTNGDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPS-SSGRPNMSQV 856          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.162e-13
Identity = 47/138 (34.06%), Postives = 74/138 (53.62%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            PK++DFG+AR+     T   T      G  GY++PEYA     + K DVYSFG ++LE+++G + +++ +   +F GNLV +  +L S G   D +D         NE+ + + +A  CV     + RPTM  + Q L
Sbjct:  479 PKVADFGMARIFEIDQTEAHT--RRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGRKNSSLYQMDASF-GNLVTYTWRLWSDGSPLDLVDSSFRDSYQRNEIIRCIHIALLCVQED-TENRPTMSAIVQML 612          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.824e-13
Identity = 49/134 (36.57%), Postives = 69/134 (51.49%), Query Frame = 3
Query:   15 KISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAK-APETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            K+SDFGL+R      TH+S+   G    +GY+ PEY  +   T K DVYSFG VL EL++G++P +     PE    N+V W   L   G +   ID C+ +      +++  +VA  CV       RP M EV
Sbjct:  746 KVSDFGLSRQTEEDLTHVSSVAKGT---VGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPEL---NIVHWARSLIRKGDVCGIIDPCIASNVKIESVWRVAEVANQCV-EQRGHNRPRMQEV 872          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.688e-13
Identity = 55/148 (37.16%), Postives = 82/148 (55.41%), Query Frame = 3
Query:    6 FEPKISDFGLARLM-NPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKG-NLVEWIAQLSSTGQ-LQDAIDKCL--VAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAI 434
            +E  ++DFGLA+LM N  + H +  ++   G  GY+APEY  T+  T K DVYS+G VLLE+++G      A  P+   G ++VEW+ +   T +     +D  L  +   +  E+ Q L +A  CV P+ P ERPTM EV   L  +
Sbjct:  912 YEAILADFGLAKLMMNSPNYHNA--MSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRS----AVEPQIGDGLHIVEWVKKKMGTFEPALSVLDVKLQGLPDQIVQEMLQTLGIAMFCVNPS-PVERPTMKEVVTLLMEV 1052          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.688e-13
Identity = 52/134 (38.81%), Postives = 66/134 (49.25%), Query Frame = 3
Query:   15 KISDFGLARLMNPID-THLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEV 413
            K+SDFGL++    +D TH+ST V G FG   Y+ PEY R    T K DVYSFG VL E +      N   A E  + +L EW       G L   +D  L  K       +F + A  CVL     ERP+M +V
Sbjct:  676 KVSDFGLSKTGPTLDHTHVSTVVKGSFG---YLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKE--QVSLAEWAPYCYKKGMLDQIVDPYLKGKITPECFKKFAETAMKCVLDQ-GIERPSMGDV 803          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.688e-13
Identity = 54/169 (31.95%), Postives = 83/169 (49.11%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFLRAIGERYHFTTEDEIMLPSDSGDADILEELI 518
            PKI+DFGLA+L +   T    F +   G  GY+APEYA     + K DV+SFG +++E++TG+   N     +    NL+ W+ +      +   ID  L   G  +E+ + + +   CV  + P  RPTM  V   L +    Y +T      LP+ S  A  LE ++
Sbjct:  500 PKIADFGLAKLYDTDQTSTHRFTSKIAGTYGYMAPEYAIYGQFSVKTDVFSFGVLVIEIITGKGNNNGRSNDDEEAENLLSWVWRCWREDIILSVIDPSLTT-GSRSEILRCIHIGLLCVQES-PASRPTMDSVALMLNS----YSYT------LPTPSRPAFALESVM 656          
BLAST of CX296262 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 6.291e-13
Identity = 57/138 (41.30%), Postives = 74/138 (53.62%), Query Frame = 3
Query:   12 PKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIAQLSSTGQLQDAIDKCLVAKGVDNELFQFLKVACNCVLPTIPKERPTMFEVYQFL 425
            PK+SDFGLA+L +   TH+ST V G    +GY+APEYA     T K DVY+FG V LELV+G RP N  +  E  K  L+EW   L   G+  + ID  L    ++ E  + + +A  C   T    RP M  V   L
Sbjct:  831 PKVSDFGLAKLYDDKKTHISTRVAGT---IGYLAPEYAMRGHLTEKTDVYAFGVVALELVSG-RP-NSDENLEDEKRYLLEWAWNLHEKGREVELIDHQLTEFNME-EGKRMIGIALLCT-QTSHALRPPMSRVVAML 961          
The following BLAST results are available for this feature:
BLAST of CX296262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
SRF8_ARATH1.268e-1336.55Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
Y5181_ARATH1.656e-1334.78Probable LRR receptor-like serine/threonine-protei... [more]
CX32_ARATH1.656e-1335.62Probable serine/threonine-protein kinase Cx32, chl... [more]
Y4245_ARATH2.162e-1334.78Probable LRR receptor-like serine/threonine-protei... [more]
CRK5_ARATH2.162e-1334.06Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
Y1677_ARATH2.824e-1336.57Probable LRR receptor-like serine/threonine-protei... [more]
Y1341_ARATH3.688e-1337.16Probable LRR receptor-like serine/threonine-protei... [more]
FERON_ARATH3.688e-1338.81Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
CRK28_ARATH3.688e-1331.95Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
Y5614_ARATH6.291e-1341.30Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC05138A08SK FerrChloL1 Citrus clementina cDNA clone C05138A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296262 ID=CX296262; Name=CX296262; organism=Citrus clementina; type=EST; length=520bp
GAGGTTTTGAGCCCAAAATATCTGATTTCGGCCTTGCTAGGCTCATGAAC
CCAATTGATACTCATTTAAGTACCTTCGTGAATGGAGAGTTTGGGGATTT
GGGTTATGTTGCTCCGGAGTACGCAAGAACTCTTGTTGCCACACCGAAGG
GAGATGTTTACAGCTTTGGAACTGTGCTTCTTGAGTTGGTAACTGGTGAG
AGACCTACCAATGTGGCTAAAGCTCCTGAAACCTTTAAGGGAAATCTCGT
TGAATGGATTGCACAGCTGTCAAGTACCGGTCAACTTCAAGATGCTATTG
ATAAATGCTTGGTTGCGAAGGGCGTTGACAATGAGCTTTTTCAGTTCCTT
AAAGTTGCATGTAACTGTGTACTTCCAACCATCCCCAAGGAGAGGCCTAC
CATGTTTGAAGTATACCAGTTTCTAAGAGCTATTGGGGAGCGTTACCATT
TTACCACTGAAGACGAGATTATGCTGCCCTCAGACAGCGGTGATGCCGAT
ATTCTTGAAGAACTTATTGT
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