CX296280
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_BURCM (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=acdS PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.495e-15 Identity = 46/116 (39.66%), Postives = 68/116 (58.62%), Query Frame = 3 Query: 288 PTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELIS 626 PTPI K +L E++ KR+D SG+ GNK RKLE+L+ DA+AQGAD +++IGG+QSN R A A +L + C L+ D GN+ + R++GA + L++ Sbjct: 15 PTPIQPLKRLSQHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLVPDALAQGADTLVSIGGVQSNQTRQVAAVAAHLGMKCVLVQEHWVNYEDPVYDRVGNIQLSRMMGADVRLVA 130
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_RHILO (1-aminocyclopropane-1-carboxylate deaminase OS=Rhizobium loti GN=acdS PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.259e-15 Identity = 43/114 (37.72%), Postives = 68/114 (59.65%), Query Frame = 3 Query: 291 TPIHKWNL--PNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELI 623 TPI K + +L E++ KR+D SG+ GNK+RKLE+++ DA+A AD ++T+GG+QSNH R A A + + C L+ + D GN+L+ R++GA + L+ Sbjct: 15 TPIEKLDRLGKHLGGKVEIYAKREDCNSGLAFGGNKLRKLEYVIPDAIASDADTLVTVGGVQSNHTRMVAAVAAKIGMKCLLVHESWVPHEDVVYDRVGNILLSRILGAEVRLV 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_CRYNE (Probable 1-aminocyclopropane-1-carboxylate deaminase OS=Cryptococcus neoformans GN=CNB00190 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.259e-15 Identity = 54/141 (38.30%), Postives = 80/141 (56.74%), Query Frame = 3 Query: 222 ASPSWASHLTPIPSHVFSLGHFPTPIHKWNLPNLPH----NTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGL---TGNLLVERLVGAHIEL 620 ++P++ + L IP F G P+PI LPNL +++ KR+D SG+ GNKVRKLE+L+ADA A+G + ++++GG+QSNH RA A L + + V DP L TGN+L+ RL+G + L Sbjct: 2 STPAYLTKLESIPKEKFLFG--PSPISY--LPNLTAVLGGKVKLYAKREDCNSGLAYGGNKVRKLEYLVADAKAKGCNTLVSVGGVQSNHTRAVTAVAVASGLKAVTV---QEKWVPIDPPLYSETGNILLSRLMGGDVRL 135
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_SALPC (D-cysteine desulfhydrase OS=Salmonella paratyphi C (strain RKS4594) GN=dcyD PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.256e-15 Identity = 51/128 (39.84%), Postives = 69/128 (53.91%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 HLT P L PTP+ LP L E+++KRDD++ + + GNK+RKLEFL+ADA+ +GAD +IT G IQSNH R A L L C +L ++ GN L+ L IE+ Sbjct: 5 HLTRFPR--LELIGAPTPLEY--LPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGADTLITAGAIQSNHVRQTVAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEM 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_VARPS (1-aminocyclopropane-1-carboxylate deaminase OS=Variovorax paradoxus (strain S110) GN=acdS PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.256e-15 Identity = 50/131 (38.17%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELIS 626 +L P H + G PTPIH K +L E++ KR+D SG+ GNK RKLE+L+ +A+ G D +++IGGIQSN R A A +L L C L+ D GN+ + R++GA + L S Sbjct: 2 NLKKFPRHALTFG--PTPIHPLKRLSAHLGGEVELYAKREDCNSGLAFGGNKTRKLEYLIPEALEGGYDTLVSIGGIQSNQTRQVAAVAAHLGLKCVLVQENWVNYSDAVYDRVGNIEMSRIMGADVRLDS 130
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_METPP (1-aminocyclopropane-1-carboxylate deaminase OS=Methylibium petroleiphilum (strain PM1) GN=acdS PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.256e-15 Identity = 49/129 (37.98%), Postives = 71/129 (55.04%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 +L P H + G PTPI K +L E++ KR+D SG+ GNK RKLE+L+ +A+AQG D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L Sbjct: 2 NLQRFPRHPLTFG--PTPIQPLKRLSAHLGGQVELYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIEMSRILGADVRL 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_SHIB3 (D-cysteine desulfhydrase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=dcyD PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15 Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = 3 Query: 288 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 PTP+ LP E+++KRDD++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R A A L L C +L ++ GN L+ L IE+ Sbjct: 18 PTPLEY--LPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLNLFNTQIEM 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_BURA4 (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia ambifaria (strain MC40-6) GN=acdS PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15 Identity = 48/131 (36.64%), Postives = 74/131 (56.49%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELIS 626 +L P + + G PTPI K +L +++ KR+D SG+ GNK RKLE+L+ DA+AQGAD +++IGG+QSN R A A +L + C L+ D GN+ + R++GA + L++ Sbjct: 2 NLQRFPRYPLTFG--PTPIQPLKRLSAHLGGKVKLYAKREDCNSGLAFGGNKTRKLEYLIPDALAQGADTLVSIGGVQSNQTRQVAAVAAHLGMKCVLVQEHWVNYDDPVYDRVGNIQLSRMMGADVRLVA 130
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_ACIAC (1-aminocyclopropane-1-carboxylate deaminase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=acdS PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15 Identity = 48/129 (37.21%), Postives = 70/129 (54.26%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 +L P H + G PTPIH K +L E++ KR+D SG+ GNK RKLE+L+ +A+ G D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L Sbjct: 2 NLQKFPRHALTFG--PTPIHPLKRLSAHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLIPEAIEGGYDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIEMSRIMGADVRL 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_ECOUT (D-cysteine desulfhydrase OS=Escherichia coli (strain UTI89 / UPEC) GN=dcyD PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15 Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = 3 Query: 288 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 PTP+ LP E+++KRDD++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R A A L L C +L ++ GN L+ L IE+ Sbjct: 18 PTPLEY--LPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEM 128 The following BLAST results are available for this feature:
BLAST of CX296280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296280 ID=CX296280; Name=CX296280; organism=Citrus clementina; type=EST; length=696bpback to top |