CX296280
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_ECO5E (D-cysteine desulfhydrase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=dcyD PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15 Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = 3 Query: 288 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 PTP+ LP E+++KRDD++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R A A L L C +L ++ GN L+ L IE+ Sbjct: 18 PTPLEY--LPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEM 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_ECO57 (D-cysteine desulfhydrase OS=Escherichia coli O157:H7 GN=dcyD PE=3 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15 Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = 3 Query: 288 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 PTP+ LP E+++KRDD++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R A A L L C +L ++ GN L+ L IE+ Sbjct: 18 PTPLEY--LPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEM 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_ECO55 (D-cysteine desulfhydrase OS=Escherichia coli (strain 55989 / EAEC) GN=dcyD PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15 Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = 3 Query: 288 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 PTP+ LP E+++KRDD++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R A A L L C +L ++ GN L+ L IE+ Sbjct: 18 PTPLEY--LPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEM 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_ECO45 (D-cysteine desulfhydrase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=dcyD PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15 Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = 3 Query: 288 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 PTP+ LP E+++KRDD++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R A A L L C +L ++ GN L+ L IE+ Sbjct: 18 PTPLEY--LPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEM 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_ECO27 (D-cysteine desulfhydrase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=dcyD PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15 Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = 3 Query: 288 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 PTP+ LP E+++KRDD++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R A A L L C +L ++ GN L+ L IE+ Sbjct: 18 PTPLEY--LPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEM 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_DIAST (1-aminocyclopropane-1-carboxylate deaminase OS=Diaphorobacter sp. (strain TPSY) GN=acdS PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.238e-14 Identity = 49/129 (37.98%), Postives = 70/129 (54.26%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 +L P H + G PTPI K +L E++ KR+D SG+ GNK RKLE+L+ +A+A G D +++IGGIQSN R A A +L L C L+ D GN+ + R++GA + L Sbjct: 2 NLQKFPRHPLTFG--PTPIQPLKRLSQHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLIPEAIAGGYDTLVSIGGIQSNQTRQVAAVAAHLGLKCVLVQENWVNYSDAVYDRVGNIEMSRILGADVRL 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_YERE8 (D-cysteine desulfhydrase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=dcyD PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.112e-14 Identity = 46/109 (42.20%), Postives = 65/109 (59.63%), Query Frame = 3 Query: 291 TPIHKWNLPNLPHNTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLT-GNLLVERLVGAHI 614 TP+ K + + E+++KRDD++ + L GNK+RKLEFL ADA+ QGAD ++T G IQSNH R A A L L C +L + + Q+ LT GN L+ L + Sbjct: 20 TPLEKLSRLSDYLGREIYIKRDDVTPLALGGNKLRKLEFLAADALRQGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALLE-NPIGTSQENYLTNGNRLLLDLFNVEV 127
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_SHISS (D-cysteine desulfhydrase OS=Shigella sonnei (strain Ss046) GN=dcyD PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.112e-14 Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = 3 Query: 288 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 PTP+ LP E+++KRDD++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R A A L L C +L ++ GN L+ L IE+ Sbjct: 18 PTPLEY--LPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGVIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEM 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_ECO7I (D-cysteine desulfhydrase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=dcyD PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.112e-14 Identity = 47/113 (41.59%), Postives = 62/113 (54.87%), Query Frame = 3 Query: 288 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 PTP+ LP E+++KRDD+ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R A A L L C +L ++ GN L+ L IE+ Sbjct: 18 PTPLEY--LPRFSDYLGREIFIKRDDVIPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEM 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_SHIFL (D-cysteine desulfhydrase OS=Shigella flexneri GN=dcyD PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.758e-14 Identity = 46/113 (40.71%), Postives = 63/113 (55.75%), Query Frame = 3 Query: 288 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 PTP+ LP E+++KRD+++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R A A L L C +L ++ GN L+ L IE+ Sbjct: 18 PTPLEY--LPRFSDYLGREIFIKRDEVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEM 128 The following BLAST results are available for this feature:
BLAST of CX296280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296280 ID=CX296280; Name=CX296280; organism=Citrus clementina; type=EST; length=696bpback to top |