CX296280
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_SHIF8 (D-cysteine desulfhydrase OS=Shigella flexneri serotype 5b (strain 8401) GN=dcyD PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.758e-14 Identity = 46/113 (40.71%), Postives = 63/113 (55.75%), Query Frame = 3 Query: 288 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 PTP+ LP E+++KRD+++ M + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R A A L L C +L ++ GN L+ L IE+ Sbjct: 18 PTPLEY--LPRFSDYLGREIFIKRDEVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEM 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_KLEP7 (D-cysteine desulfhydrase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=dcyD PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.603e-14 Identity = 46/113 (40.71%), Postives = 64/113 (56.64%), Query Frame = 3 Query: 288 PTPIHKWNLPNLPHNT--EVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 PTP+ LP L + E+++KRDD + + + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R A A L L C +L ++ GN L+ L +E+ Sbjct: 18 PTPLEY--LPRLSDHLGREIFIKRDDTTPLAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTRAENYLSNGNRLLLDLFNTQVEM 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_KLEP3 (D-cysteine desulfhydrase OS=Klebsiella pneumoniae (strain 342) GN=dcyD PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.603e-14 Identity = 46/113 (40.71%), Postives = 64/113 (56.64%), Query Frame = 3 Query: 288 PTPIHKWNLPNLPHNT--EVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 PTP+ LP L + E+++KRDD + + + GNK+RKLEFL ADA+ +GAD +IT G IQSNH R A A L L C +L ++ GN L+ L +E+ Sbjct: 18 PTPLEY--LPRLSDHLGREIFIKRDDTTPLAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTGAENYLSNGNRLLLDLFNTQVEM 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_ESCF3 (D-cysteine desulfhydrase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=dcyD PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.603e-14 Identity = 45/113 (39.82%), Postives = 63/113 (55.75%), Query Frame = 3 Query: 288 PTPIHKWNLPNLPH--NTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 PTP+ LP E+++KRDD++ + + GNKVRKLEFL ADA+ +GAD ++T G IQSNH R A A L L C +L ++ GN L+ L +E+ Sbjct: 18 PTPLEY--LPRFSDYLGREIFIKRDDVTPLAMGGNKVRKLEFLAADALREGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTQAENYLSNGNRLLLDLFNVQVEM 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_VARPD (1-aminocyclopropane-1-carboxylate deaminase OS=Variovorax paradoxus GN=acdS PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.603e-14 Identity = 48/129 (37.21%), Postives = 70/129 (54.26%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 +L P HV + G PTPI K +L +++ KR+D SG+ GNK RKLE+L+ +A+ G D +++IGGIQSN R A A +L L C L+ D GN+ + R++GA + L Sbjct: 2 NLKKFPRHVLTFG--PTPIQPLKRLSAHLGGKVDLYAKREDCNSGLAFGGNKTRKLEYLIPEALEGGYDTLVSIGGIQSNQTRQVAAVAAHLGLKCVLVQENWVNYSDAVYDRVGNIEMSRIMGADVRL 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_BURPP (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=acdS PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.603e-14 Identity = 47/131 (35.88%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELIS 626 +L P + + G PTPI K +L ++ KR+D SG GNK RKLE+L+ +A+AQG D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L++ Sbjct: 2 NLQRFPRYPLTFG--PTPIQPLKRLSDHLGGKVHLYAKREDCNSGFAFGGNKTRKLEYLIPEALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVA 130
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_YERPS (D-cysteine desulfhydrase OS=Yersinia pseudotuberculosis GN=dcyD PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.705e-14 Identity = 39/81 (48.15%), Postives = 53/81 (65.43%), Query Frame = 3 Query: 291 TPIHKWNLPNLPHNTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 533 TP+ K + + E+++KRDD++ + L GNK+RKLEFL ADA+ QGAD ++T G IQSNH R A A L L C +L Sbjct: 20 TPLEKLSRLSDYLGREIYIKRDDVTPVALGGNKLRKLEFLAADALRQGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALL 100
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_YERPP (D-cysteine desulfhydrase OS=Yersinia pestis (strain Pestoides F) GN=dcyD PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.705e-14 Identity = 39/81 (48.15%), Postives = 53/81 (65.43%), Query Frame = 3 Query: 291 TPIHKWNLPNLPHNTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 533 TP+ K + + E+++KRDD++ + L GNK+RKLEFL ADA+ QGAD ++T G IQSNH R A A L L C +L Sbjct: 20 TPLEKLSRLSDYLGREIYIKRDDVTPVALGGNKLRKLEFLAADALRQGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALL 100
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_YERPN (D-cysteine desulfhydrase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=dcyD PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.705e-14 Identity = 39/81 (48.15%), Postives = 53/81 (65.43%), Query Frame = 3 Query: 291 TPIHKWNLPNLPHNTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 533 TP+ K + + E+++KRDD++ + L GNK+RKLEFL ADA+ QGAD ++T G IQSNH R A A L L C +L Sbjct: 20 TPLEKLSRLSDYLGREIYIKRDDVTPVALGGNKLRKLEFLAADALRQGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALL 100
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_YERPE (D-cysteine desulfhydrase OS=Yersinia pestis GN=dcyD PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.705e-14 Identity = 39/81 (48.15%), Postives = 53/81 (65.43%), Query Frame = 3 Query: 291 TPIHKWNLPNLPHNTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 533 TP+ K + + E+++KRDD++ + L GNK+RKLEFL ADA+ QGAD ++T G IQSNH R A A L L C +L Sbjct: 20 TPLEKLSRLSDYLGREIYIKRDDVTPVALGGNKLRKLEFLAADALRQGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALL 100 The following BLAST results are available for this feature:
BLAST of CX296280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296280 ID=CX296280; Name=CX296280; organism=Citrus clementina; type=EST; length=696bpback to top |