CX296280
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: DCYD_YERP3 (D-cysteine desulfhydrase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=dcyD PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.705e-14 Identity = 39/81 (48.15%), Postives = 53/81 (65.43%), Query Frame = 3 Query: 291 TPIHKWNLPNLPHNTEVWLKRDDLSGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLIL 533 TP+ K + + E+++KRDD++ + L GNK+RKLEFL ADA+ QGAD ++T G IQSNH R A A L L C +L Sbjct: 20 TPLEKLSRLSDYLGREIYIKRDDVTPVALGGNKLRKLEFLAADALRQGADTLVTAGAIQSNHVRQTAAVAAKLGLHCVALL 100
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_RALSO (1-aminocyclopropane-1-carboxylate deaminase OS=Ralstonia solanacearum GN=acdS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14 Identity = 48/129 (37.21%), Postives = 69/129 (53.49%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 +L P H + G PTPI K +L E++ KR+D SG+ GNK RKLE+L+ + +A G D +++IGGIQSN R A A +L L C L+ D GN+ + R++GA + L Sbjct: 2 NLNKHPRHPLTFG--PTPIQPLKRLSAHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLVPEVLAGGYDTLVSIGGIQSNQTRQVAAVAAHLGLKCVLVQENWVNYADAVYDRVGNIELSRILGADVRL 128
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_AGRRK (1-aminocyclopropane-1-carboxylate deaminase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=acdS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14 Identity = 41/117 (35.04%), Postives = 68/117 (58.12%), Query Frame = 3 Query: 288 PTPIHKWNL--PNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISK 629 PT I K +L +++ KR+D SG+ GNK+RKLE+++ DA+A AD +++IGG+QSNH R A A + C L+ + D GN+L+ R++GA ++++ + Sbjct: 14 PTHIEKLERLSEHLGGKVQLYAKREDCNSGLAFGGNKLRKLEYIIPDAIASNADTLVSIGGVQSNHTRMIAAVAAKIGFKCRLVQESWVPHEDAVYDRVGNILLSRIMGADVQMVDE 130
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_PSEUD (1-aminocyclopropane-1-carboxylate deaminase OS=Pseudomonas sp. (strain ACP) GN=acdS PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.026e-14 Identity = 46/130 (35.38%), Postives = 70/130 (53.85%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIHKWNL--PNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELI 623 +L P + + G PTPI +L ++ KR+D SG+ GNK RKLE+L+ +A+AQG D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L+ Sbjct: 2 NLQRFPRYPLTFG--PTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLV 129
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_BURM1 (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=acdS PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.026e-14 Identity = 47/130 (36.15%), Postives = 71/130 (54.62%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIH--KWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELI 623 +L P + + G PTPI K +L E++ KR+D SG+ GNK RKLE+L+ DA+ Q AD +++IGG+QSN R A A +L + C L+ D GN+ + R++GA + L+ Sbjct: 2 NLQRFPRYPLTFG--PTPIQPLKRLSEHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLIPDALEQRADTLVSIGGVQSNQTRQVAAVAAHLGMKCVLVQEHWVNYDDPVYDRVGNIQLSRMMGADVRLV 129
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_BRASO (1-aminocyclopropane-1-carboxylate deaminase OS=Bradyrhizobium sp. (strain ORS278) GN=acdS PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.026e-14 Identity = 44/123 (35.77%), Postives = 70/123 (56.91%), Query Frame = 3 Query: 270 FSLGHFPTPIHKWNLPNLPH----NTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELI 623 +SL TPI +LP L +++ KRDD SG+ + GNK+RKLE+++ DA+ AD +++IGG+QSNH R A A + + C ++ + D GN+L+ RL+GA ++ Sbjct: 10 YSLTFGVTPIE--HLPRLTAALGGKVQIYAKRDDCNSGLAMGGNKLRKLEYIVPDAIESNADTLVSIGGVQSNHTRMVAATAAKIGMKCVVVQESWVPHEDAVYDRVGNILMTRLMGADSRIV 130
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_SCHPO (Probable 1-aminocyclopropane-1-carboxylate deaminase OS=Schizosaccharomyces pombe GN=SPAC922.03 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.048e-13 Identity = 46/118 (38.98%), Postives = 64/118 (54.24%), Query Frame = 3 Query: 288 PTPIHKWNL--PNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELISKE 632 PTPI L E++ KR+D SG+ GNK+RKLE+L+ +A+ G D +++IGGIQSN R A A +L LDC LI D GN+ + R+V A + L S + Sbjct: 15 PTPITSMKRLSKTLGGKVEIFAKREDCNSGLAFGGNKIRKLEYLIPEAIDGGYDTLVSIGGIQSNQTRQVAAVAAHLGLDCVLIQEDWVDYKDTMYDRVGNIELSRIVNADVRLDSSK 132
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_BRASB (1-aminocyclopropane-1-carboxylate deaminase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=acdS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.788e-13 Identity = 42/116 (36.21%), Postives = 67/116 (57.76%), Query Frame = 3 Query: 291 TPIHKWNLPNLPH----NTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELI 623 TPI +LP L +++ KRDD SG+ + GNK+RKLE+++ DA+ AD +++IGG+QSNH R A A + + C ++ + D GN+L+ RL+GA ++ Sbjct: 17 TPIE--HLPRLTAALGGKVQIYAKRDDCNSGLAMGGNKLRKLEYIVPDAIESNADTLVSIGGVQSNHTRMVAATAAKIGMKCVVVQESWVPHEDAVYDRVGNILMTRLMGADSRIV 130
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_BURXL (1-aminocyclopropane-1-carboxylate deaminase OS=Burkholderia xenovorans (strain LB400) GN=acdS PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.335e-13 Identity = 45/130 (34.62%), Postives = 69/130 (53.08%), Query Frame = 3 Query: 243 HLTPIPSHVFSLGHFPTPIHKWNL--PNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIELI 623 +L P + + G PTPI +L ++ KR+D SG+ GNK RKLE+L+ + +AQG D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L+ Sbjct: 2 NLQRFPRYPLTFG--PTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEVLAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLV 129
BLAST of CX296280 vs. ExPASy Swiss-Prot
Match: 1A1D_PSES0 (1-aminocyclopropane-1-carboxylate deaminase OS=Pseudomonas sp. (strain 6G5) GN=acdS PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.050e-13 Identity = 41/111 (36.94%), Postives = 64/111 (57.66%), Query Frame = 3 Query: 291 TPIHKWNLPNLPHNTEVWLKRDDL-SGMQLSGNKVRKLEFLMADAVAQGADCIITIGGIQSNHCRAAAVAAKYLNLDCYLILRTSKVLVDQDPGLTGNLLVERLVGAHIEL 620 TP+ + + +L E++ KR+D SG+ GNK RKLE+L+ +A+ QG D +++IGGIQSN R A A +L + C L+ D GN+ + R++GA + L Sbjct: 19 TPLKRLS-QHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLIPEAIEQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIEMSRIMGADVRL 128 The following BLAST results are available for this feature:
BLAST of CX296280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296280 ID=CX296280; Name=CX296280; organism=Citrus clementina; type=EST; length=696bpback to top |