CX296284

Overview
NameCX296284
Unique NameCX296284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length137
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15452 contig Ccv1_Contig15452:307..443. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296284 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.766e-12
Identity = 33/35 (94.29%), Postives = 33/35 (94.29%), Query Frame = 1
Query:   31 HLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLR 135
            HLTCAD  RAPGVQTPVIVRFSTVIHERGSPETLR
Sbjct:   83 HLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLR 117          
BLAST of CX296284 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSJ (Catalase isozyme B OS=Oryza sativa subsp. japonica GN=CATB PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.306e-12
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1
Query:   31 HLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLR 135
            HLTCAD  RAPGVQTPVIVRFSTV+HERGSPETLR
Sbjct:   83 HLTCADFLRAPGVQTPVIVRFSTVVHERGSPETLR 117          
BLAST of CX296284 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSI (Catalase isozyme B OS=Oryza sativa subsp. indica GN=CATB PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.306e-12
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1
Query:   31 HLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLR 135
            HLTCAD  RAPGVQTPVIVRFSTV+HERGSPETLR
Sbjct:   83 HLTCADFLRAPGVQTPVIVRFSTVVHERGSPETLR 117          
BLAST of CX296284 vs. ExPASy Swiss-Prot
Match: CATA1_MAIZE (Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.306e-12
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1
Query:   31 HLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLR 135
            HLTCAD  RAPGVQTPVIVRFSTV+HERGSPETLR
Sbjct:   83 HLTCADFLRAPGVQTPVIVRFSTVVHERGSPETLR 117          
BLAST of CX296284 vs. ExPASy Swiss-Prot
Match: CATA_AVIMR (Catalase OS=Avicennia marina PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.934e-12
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1
Query:   31 HLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLR 135
            HLTCAD  RAPGVQTP+IVRFSTVIHERGSPETLR
Sbjct:   83 HLTCADFLRAPGVQTPLIVRFSTVIHERGSPETLR 117          
BLAST of CX296284 vs. ExPASy Swiss-Prot
Match: CATA3_SOYBN (Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.934e-12
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1
Query:   31 HLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLR 135
            HLTCAD  RAPGVQTP+IVRFSTVIHERGSPETLR
Sbjct:   83 HLTCADFLRAPGVQTPLIVRFSTVIHERGSPETLR 117          
BLAST of CX296284 vs. ExPASy Swiss-Prot
Match: CATA1_SOYBN (Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.934e-12
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1
Query:   31 HLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLR 135
            HLTCAD  RAPGVQTP+IVRFSTVIHERGSPETLR
Sbjct:   83 HLTCADFLRAPGVQTPLIVRFSTVIHERGSPETLR 117          
BLAST of CX296284 vs. ExPASy Swiss-Prot
Match: CATA_IPOBA (Catalase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.711e-12
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 1
Query:   31 HLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLR 135
            HLTCAD  RAPGVQTP+IVRFSTVIHERGSPET+R
Sbjct:   83 HLTCADFLRAPGVQTPLIVRFSTVIHERGSPETIR 117          
BLAST of CX296284 vs. ExPASy Swiss-Prot
Match: CATA2_NICPL (Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN=CAT2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.711e-12
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 1
Query:   31 HLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLR 135
            HLTCAD  RAPGVQTPVIVRFSTV+HERGSPE+LR
Sbjct:   83 HLTCADFLRAPGVQTPVIVRFSTVVHERGSPESLR 117          
BLAST of CX296284 vs. ExPASy Swiss-Prot
Match: CATA3_CUCPE (Catalase isozyme 3 OS=Cucurbita pepo GN=CAT3 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.145e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1
Query:   31 HLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLR 135
            +LTCAD  RAPGVQTPVIVRFSTVIHERGSPETLR
Sbjct:   83 NLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLR 117          
The following BLAST results are available for this feature:
BLAST of CX296284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
CATA1_GOSHI1.766e-1294.29Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P... [more]
CATA2_ORYSJ2.306e-1291.43Catalase isozyme B OS=Oryza sativa subsp. japonica... [more]
CATA2_ORYSI2.306e-1291.43Catalase isozyme B OS=Oryza sativa subsp. indica G... [more]
CATA1_MAIZE2.306e-1291.43Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1[more]
CATA_AVIMR3.934e-1291.43Catalase OS=Avicennia marina PE=2 SV=1[more]
CATA3_SOYBN3.934e-1291.43Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1[more]
CATA1_SOYBN3.934e-1291.43Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1[more]
CATA_IPOBA6.711e-1288.57Catalase OS=Ipomoea batatas PE=2 SV=1[more]
CATA2_NICPL6.711e-1288.57Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN... [more]
CATA3_CUCPE1.145e-1191.43Catalase isozyme 3 OS=Cucurbita pepo GN=CAT3 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionC05138D01SK FerrChloL1 Citrus clementina cDNA clone C05138D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296284 ID=CX296284; Name=CX296284; organism=Citrus clementina; type=EST; length=137bp
ACGAGGCCTCGTCCCGAATTCGGCACGAGGCACCTTACTTGTGCTGATCT
TTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCCACTG
TTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGA
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