CX296295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296295 vs. ExPASy Swiss-Prot
Match: UCRIA_CHLRE (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Chlamydomonas reinhardtii GN=petC PE=1 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.087e-51 Identity = 91/128 (71.09%), Postives = 105/128 (82.03%), Query Frame = -3 Query: 248 GTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI-ENGKVVFVPWTETDFRTGEAPWWA 628 G AKDA+GNDI A +WL TH GDR+L++GLKGDPTYL+V D T+ YG+NAVCTHLGCVVPW +AENKF CPCHGSQYN +G+VVRGPAPLSLALAH ++ E+G V F WTETDFRTG PWWA Sbjct: 79 GQAAKDALGNDIKAGEWLKTHLAGDRSLSQGLKGDPTYLIVTADSTIEKYGLNAVCTHLGCVVPWVAAENKFKCPCHGSQYNAEGKVVRGPAPLSLALAHCDVAESGLVTFSTWTETDFRTGLEPWWA 206
BLAST of CX296295 vs. ExPASy Swiss-Prot
Match: UCRI_NOSSP (Cytochrome b6-f complex iron-sulfur subunit OS=Nostoc sp. (strain PCC 7906) GN=petC PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.560e-51 Identity = 87/127 (68.50%), Postives = 102/127 (80.31%), Query Frame = -3 Query: 248 GTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 628 GTTAKD +GND+ + +L GDR L +GLKGDPTY+VVE + + YGINA+CTHLGCVVPWN AENKF CPCHGSQY+ G+VVRGPAPLSLALAHAN + K++ PWTETDFRTG+APWWA Sbjct: 53 GTTAKDELGNDVSLSKFLENRNAGDRALVQGLKGDPTYIVVENKQAIKDYGINAICTHLGCVVPWNVAENKFKCPCHGSQYDETGKVVRGPAPLSLALAHANTVDDKIILSPWTETDFRTGDAPWWA 179
BLAST of CX296295 vs. ExPASy Swiss-Prot
Match: UCRI_SYNSC (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain CC9605) GN=petC PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.650e-51 Identity = 86/127 (67.72%), Postives = 105/127 (82.68%), Query Frame = -3 Query: 248 GTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 628 GT+AKD +GN I A+ WL++H GDR+L +GLKGDPTYL+VE + + SYGINA+CTHLGCVVPWNS NKF+CPCHGSQY++ G+VVRGPAPLSLALA+ ++EN V WTETDFRTG+ PWWA Sbjct: 52 GTSAKDELGNPITASGWLSSHPEGDRSLVQGLKGDPTYLIVEGEDAIGSYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDSTGKVVRGPAPLSLALANVSVENDNVFVSQWTETDFRTGDKPWWA 178
BLAST of CX296295 vs. ExPASy Swiss-Prot
Match: UCRI_SYNP6 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=petC PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.650e-51 Identity = 87/127 (68.50%), Postives = 103/127 (81.10%), Query Frame = -3 Query: 248 GTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 628 G AKDA+GND++ + +L H GDRTL +GLKGDPTYLVVE + + YGINAVCTHLGCVVPWN++ENKF CPCHGSQY+ G+VVRGPAPLSLALAH ++ + KV PWTETDFRTG+ PWWA Sbjct: 53 GVAAKDALGNDVVLSKFLADHNVGDRTLVQGLKGDPTYLVVESSEAIGDYGINAVCTHLGCVVPWNASENKFKCPCHGSQYDATGKVVRGPAPLSLALAHVSVTDDKVFLSPWTETDFRTGDNPWWA 179
BLAST of CX296295 vs. ExPASy Swiss-Prot
Match: UCRI_SYNE7 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus elongatus (strain PCC 7942) GN=petC PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.650e-51 Identity = 87/127 (68.50%), Postives = 103/127 (81.10%), Query Frame = -3 Query: 248 GTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 628 G AKDA+GND++ + +L H GDRTL +GLKGDPTYLVVE + + YGINAVCTHLGCVVPWN++ENKF CPCHGSQY+ G+VVRGPAPLSLALAH ++ + KV PWTETDFRTG+ PWWA Sbjct: 53 GVAAKDALGNDVVLSKFLADHNVGDRTLVQGLKGDPTYLVVESSEAIGDYGINAVCTHLGCVVPWNASENKFKCPCHGSQYDATGKVVRGPAPLSLALAHVSVTDDKVFLSPWTETDFRTGDNPWWA 179
BLAST of CX296295 vs. ExPASy Swiss-Prot
Match: UCRI_NOSP7 (Cytochrome b6-f complex iron-sulfur subunit OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=petC PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.650e-51 Identity = 85/127 (66.93%), Postives = 101/127 (79.53%), Query Frame = -3 Query: 248 GTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 628 GTTAKD +GND+ +L GDR L +GLKGDPTY+VV+ + + YGINA+CTHLGCVVPWN AENKF CPCHGSQY+ G+VVRGPAPLSLALAH N+ + K+V PWTETDFRTG+APWW+ Sbjct: 53 GTTAKDELGNDVSVTKFLENRNAGDRNLVQGLKGDPTYIVVDSKEAIKDYGINAICTHLGCVVPWNVAENKFKCPCHGSQYDETGKVVRGPAPLSLALAHTNVSDDKIVLTPWTETDFRTGDAPWWS 179
BLAST of CX296295 vs. ExPASy Swiss-Prot
Match: UCRI_MASLA (Cytochrome b6-f complex iron-sulfur subunit OS=Mastigocladus laminosus GN=petC PE=1 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 7.932e-51 Identity = 84/126 (66.67%), Postives = 102/126 (80.95%), Query Frame = -3 Query: 251 GTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 628 GTTAKD +GN++ + +L +H GDR L +GLKGDPTY+VVE + + YGINAVCTHLGCVVPWN+AENKF CPCHGSQY+ G+V+RGPAPLSLAL HA +++ +V PWTETDFRTGE PWW Sbjct: 53 GTTAKDKLGNNVKVSKFLESHNAGDRVLVQGLKGDPTYIVVESKEAIRDYGINAVCTHLGCVVPWNAAENKFKCPCHGSQYDETGKVIRGPAPLSLALCHATVQDDNIVLTPWTETDFRTGEKPWW 178
BLAST of CX296295 vs. ExPASy Swiss-Prot
Match: UCRI_SYNPX (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain WH8102) GN=petC PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.353e-50 Identity = 87/127 (68.50%), Postives = 102/127 (80.31%), Query Frame = -3 Query: 248 GTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 628 GTTAKD +GN I A WL++H GDR+L +GLKGDPTYL+VE + SYGINA+CTHLGCVVPWNS NKF+CPCHGSQY+ G+VVRGPAPLSLALA+ ++EN V WTETDFRTG+ PWWA Sbjct: 52 GTTAKDELGNAITATGWLSSHPEGDRSLVQGLKGDPTYLIVEGPDAIGSYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDATGKVVRGPAPLSLALANVSVENDNVFVSQWTETDFRTGDKPWWA 178
BLAST of CX296295 vs. ExPASy Swiss-Prot
Match: UCRI_PROMT (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain NATL2A) GN=petC PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.767e-50 Identity = 84/126 (66.67%), Postives = 105/126 (83.33%), Query Frame = -3 Query: 251 GTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 628 GT AKD +GN++ A+ WL+TH GDR+L +GLKGDPTYL+VE + + SYGINA+CTHLGCVVPWNS NK++CPCHGSQY++ G+VVRGPAPLSLA+AH +IE+ +V+ WTETDFRTG PWW Sbjct: 52 GTNAKDELGNNVSASGWLSTHPVGDRSLVQGLKGDPTYLIVEGEDAITSYGINAICTHLGCVVPWNSGANKYMCPCHGSQYDSTGKVVRGPAPLSLAIAHVSIEDDQVLVSQWTETDFRTGTDPWW 177
BLAST of CX296295 vs. ExPASy Swiss-Prot
Match: UCRI_PROM1 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain NATL1A) GN=petC PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.767e-50 Identity = 84/126 (66.67%), Postives = 105/126 (83.33%), Query Frame = -3 Query: 251 GTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 628 GT AKD +GN++ A+ WL+TH GDR+L +GLKGDPTYL+VE + + SYGINA+CTHLGCVVPWNS NK++CPCHGSQY++ G+VVRGPAPLSLA+AH +IE+ +V+ WTETDFRTG PWW Sbjct: 52 GTNAKDELGNNVSASGWLSTHPVGDRSLVQGLKGDPTYLIVEGEDAITSYGINAICTHLGCVVPWNSGANKYMCPCHGSQYDSTGKVVRGPAPLSLAIAHVSIEDDQVLVSQWTETDFRTGTDPWW 177 The following BLAST results are available for this feature:
BLAST of CX296295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296295 ID=CX296295; Name=CX296295; organism=Citrus clementina; type=EST; length=684bpback to top |