CX296299
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_MOUSE (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Mus musculus GN=Gldc PE=1 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 9.985e-64 Identity = 119/185 (64.32%), Postives = 140/185 (75.68%), Query Frame = 3 Query: 24 HPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 HPV+S I E + P+GT++AAPWGS+ ILPIS+ YI MMG KGL EA++IAILNANYMAKRLEKHY +LFRG G VAHEFI+D R K +A +E DVAKRL DYGFH PTMSWPV GTLMIEPTESE K ELDR+CDA+ISIR+EIA IE G+ D N LK +PH + + W +PY Sbjct: 788 HPVIS---IKPTEGTWPVGTVSAAPWGSSSILPISWAYIKMMGGKGLKEATEIAILNANYMAKRLEKHYRVLFRGARGYVAHEFILDTRPFKKSANVEAVDVAKRLQDYGFHAPTMSWPVAGTLMIEPTESEDKAELDRFCDAMISIRQEIADIEEGRIDPRVNPLKMSPHSLTCVTSSCWDRPY 969
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_CHICK (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Gallus gallus GN=GLDC PE=1 SV=2) HSP 1 Score: 241.506 bits (615), Expect = 2.224e-63 Identity = 120/185 (64.86%), Postives = 139/185 (75.14%), Query Frame = 3 Query: 24 HPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 HPV+ I + + PLGT++AAPWGS+ ILPIS+ YI MG+KGL AS+IAILNANYMAKRLEKHY ILFRGV G VAHEFI+D R K TA IE D+AKRL DYGFH PTMSWPV GTLMIEPTESE K ELDR+CDA+ISIR+EIA IE G+ D N LK +PH + + W +PY Sbjct: 767 HPVIK---IQTDKDACPLGTVSAAPWGSSAILPISWVYIKTMGAKGLKHASEIAILNANYMAKRLEKHYKILFRGVRGYVAHEFILDTRPFKKTANIEAVDLAKRLQDYGFHAPTMSWPVAGTLMIEPTESEDKGELDRFCDAMISIRQEIADIEEGRMDPQVNPLKMSPHTLNCVTSSKWDRPY 948
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_THEEB (Glycine dehydrogenase [decarboxylating] OS=Thermosynechococcus elongatus (strain BP-1) GN=gcvP PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 1.594e-61 Identity = 111/167 (66.47%), Postives = 134/167 (80.24%), Query Frame = 3 Query: 78 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 G + AAPWGSA ILPIS+ YI +MG GLT A+ IAILNANY+AKRLE +YP+L++G +G VAHE I+DLR LK +AGIE ED+AKRLMDYGFH PT+SWPVPGTLMIEPTESE+K ELDR+C+A+I+IR EIA+IE G +D N LK APHP +L + W PY Sbjct: 745 GPVTAAPWGSASILPISWMYITLMGGVGLTRATAIAILNANYIAKRLEPYYPVLYKGAHGLVAHECILDLRPLKKSAGIEVEDIAKRLMDYGFHAPTVSWPVPGTLMIEPTESETKAELDRFCEAMIAIRSEIAEIEAGVSDRQQNPLKNAPHPALMLATEPWPYPY 911
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_ANASP (Glycine dehydrogenase [decarboxylating] OS=Anabaena sp. (strain PCC 7120) GN=gcvP PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 1.594e-61 Identity = 113/185 (61.08%), Postives = 143/185 (77.30%), Query Frame = 3 Query: 24 HPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 HPV+ +G P Q +G +AAAPWGSA IL IS+ YI MMG+ GLT+A+K+AILNANY+AK+L +YP+L++G NG VAHE I+DLR LK +A IE +D+AKRL+DYGFH PT+SWPV GT+M+EPTESES+ ELDR+C+ALI+IR+EIA IE GK DI +N LK APH L+ W PY Sbjct: 760 HPVLESGKNP-----QNIGAVAAAPWGSASILVISWMYIVMMGADGLTQATKVAILNANYIAKKLAAYYPVLYKGQNGLVAHECILDLRALKKSANIEIDDIAKRLIDYGFHAPTVSWPVAGTIMVEPTESESQAELDRFCEALIAIRQEIADIEAGKVDIQDNSLKNAPHTVESLIVGEWPHPY 939
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_HUMAN (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Homo sapiens GN=GLDC PE=1 SV=2) HSP 1 Score: 234.572 bits (597), Expect = 2.719e-61 Identity = 115/185 (62.16%), Postives = 137/185 (74.05%), Query Frame = 3 Query: 24 HPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 HPV+S + E + P+GT++AAPWGS+ ILPIS+ YI MMG KGL +A++ AILNANYMAKRLE HY ILFRG G V HEFI+D R K +A IE DVAKRL DYGFH PTMSWPV GTLM+EPTESE K ELDR+CDA+ISIR+EIA IE G+ D N LK +PH + + W +PY Sbjct: 783 HPVIS---LKRNEDACPVGTVSAAPWGSSSILPISWAYIKMMGGKGLKQATETAILNANYMAKRLETHYRILFRGARGYVGHEFILDTRPFKKSANIEAVDVAKRLQDYGFHAPTMSWPVAGTLMVEPTESEDKAELDRFCDAMISIRQEIADIEEGRIDPRVNPLKMSPHSLTCVTSSHWDRPY 964
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_PROMM (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus (strain MIT 9313) GN=gcvP PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 3.006e-60 Identity = 109/185 (58.92%), Postives = 142/185 (76.76%), Query Frame = 3 Query: 24 HPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 HP+ + GG Q +G I+AAPWGSA ILPIS+ Y+ MMG++GL +AS +A+L+ANY+A RL HYP+LFRG G VAHE I+DLR LK +AG+E +D+AKRLMDYGFH PT+SWPV GT+M+EPTESES EEL+R+CDA+I+IREE A IE+G+ D NN L+ APH + + + W +PY Sbjct: 730 HPLAACGG------EQGIGAISAAPWGSAGILPISWMYLRMMGAEGLRQASAVALLSANYLAHRLHPHYPVLFRGQAGLVAHECILDLRPLKRSAGLEVDDIAKRLMDYGFHAPTVSWPVAGTVMVEPTESESLEELNRFCDAMIAIREETAAIESGQIDPQNNPLRRAPHTLAAVTAEVWDRPY 908
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_PROM3 (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus (strain MIT 9303) GN=gcvP PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 3.006e-60 Identity = 109/185 (58.92%), Postives = 142/185 (76.76%), Query Frame = 3 Query: 24 HPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 HP+ + GG Q +G I+AAPWGSA ILPIS+ Y+ MMG++GL +AS +A+L+ANY+A RL HYP+LFRG G VAHE I+DLR LK +AG+E +D+AKRLMDYGFH PT+SWPV GT+M+EPTESES EEL+R+CDA+I+IREE A IE+G+ D NN L+ APH + + + W +PY Sbjct: 750 HPLAACGG------EQGIGAISAAPWGSAGILPISWMYLRMMGAEGLRQASAVALLSANYLAHRLHPHYPVLFRGQAGLVAHECILDLRPLKRSAGLEVDDIAKRLMDYGFHAPTVSWPVAGTVMVEPTESESLEELNRFCDAMIAIREETAAIESGQIDPQNNPLRRAPHTLAAVTAEVWDRPY 928
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_DICDI (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Dictyostelium discoideum GN=gcvP PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 6.697e-60 Identity = 108/168 (64.29%), Postives = 130/168 (77.38%), Query Frame = 3 Query: 75 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 + ++A PWGS+ ILPI+Y Y+ +MG +GL +A+++AILNANYMA RL+ HY IL+ G +G VAHEFI+DLR K +AGIE EDVAKRL D FHGPTMSWPVP TLMIEPTESESK ELDR CDALI IREEI +IE GKAD NNVL +PH +++ D W PY Sbjct: 783 MSAVSAGPWGSSSILPITYVYLKLMGGQGLKKATQVAILNANYMASRLKDHYKILYTGSHGLVAHEFIIDLRMFKESAGIEAEDVAKRLQDMNFHGPTMSWPVPNTLMIEPTESESKYELDRLCDALILIREEIREIETGKADRKNNVLVNSPHTEKVIVADNWNYPY 950
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_HAHCH (Glycine dehydrogenase [decarboxylating] OS=Hahella chejuensis (strain KCTC 2396) GN=gcvP PE=3 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 9.671e-59 Identity = 115/189 (60.85%), Postives = 144/189 (76.19%), Query Frame = 3 Query: 12 LSAFHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 L+ F P S G A + P I+AAPWGSA ILPIS+TYI MMG +GLTEA+K AILNANY+AKRLE HYP+L+ G G VAHE I+D+R K++ G+ +D+AKRL+D+GFH PTMS+PVPGTLMIEPTESES ELDR+CDA+I+IREEI IENG+ D+ ++ L APH + L+GD W +PY Sbjct: 731 LAPFLPGHSAMGETADKAIAP---ISAAPWGSAGILPISWTYIRMMGGEGLTEATKSAILNANYIAKRLEPHYPVLYTGSQGFVAHECIIDVRPFKDSCGVTVDDIAKRLIDFGFHAPTMSFPVPGTLMIEPTESESLAELDRFCDAMIAIREEIRAIENGEYDVDHSPLHHAPHTAADLVGD-WDRPY 915
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_PROMT (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus (strain NATL2A) GN=gcvP PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 2.154e-58 Identity = 113/185 (61.08%), Postives = 137/185 (74.05%), Query Frame = 3 Query: 24 HPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 H ++ GG A + ++AAP+GSA ILPIS+ YI MMGS GL +AS IAIL+ANY+AKRL+ +YP+LF+ NG VAHE I+DLR LK+ GIE EDVAKRLMDYGFH PT+SWPV GTLM+EPTESES ELDR+CDA+I IREEI QI+ GK D NN LK +PH + D W +PY Sbjct: 741 HSIIKCGGQKA------ISAVSAAPFGSAGILPISWMYIRMMGSDGLRKASSIAILSANYLAKRLDPYYPVLFKDPNGLVAHECILDLRPLKSQLGIEVEDVAKRLMDYGFHAPTISWPVAGTLMVEPTESESLPELDRFCDAMIGIREEIEQIKLGKIDPINNPLKQSPHTLKTVTSDDWDRPY 919 The following BLAST results are available for this feature:
BLAST of CX296299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 368
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296299 ID=CX296299; Name=CX296299; organism=Citrus clementina; type=EST; length=578bpback to top |