CX296299
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_BURCC (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cenocepacia (strain MC0-3) GN=gcvP PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 5.867e-56 Identity = 103/168 (61.31%), Postives = 133/168 (79.17%), Query Frame = 3 Query: 75 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL HYP+L+ G G VAHE I+DLR +K ++GI +DVAKRLMDYGFH PTMS+PVPGTLM+EPTESES+EELDR+ A+I+IREEI +E G+AD +N L+ APH +++ + W Y Sbjct: 764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKESSGISVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESQEELDRFIAAMIAIREEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAY 931
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_VIBFM (Glycine dehydrogenase [decarboxylating] OS=Vibrio fischeri (strain MJ11) GN=gcvP PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 7.663e-56 Identity = 102/165 (61.82%), Postives = 127/165 (76.97%), Query Frame = 3 Query: 84 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 ++AA GSA ILPIS+ YIAMMG GLTEA+K+AILNANY+ +RL HYP+L+RG NG +AHE I+D+R LK GI ED+AKRLMD+GFH PTMS+PV GTLM+EPTESE ELDR+CDA+I+IREE+ ++E G+ + NN L APH LM D+W PY Sbjct: 746 VSAADLGSASILPISWAYIAMMGEMGLTEATKVAILNANYVMERLRPHYPVLYRGSNGRIAHECIIDIRPLKEATGISEEDIAKRLMDFGFHAPTMSFPVAGTLMVEPTESEDLAELDRFCDAMIAIREEMHKVEQGEWPLDNNPLVNAPHTQVDLMSDSWDHPY 910
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_RHOPA (Glycine dehydrogenase [decarboxylating] OS=Rhodopseudomonas palustris GN=gcvP PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 7.663e-56 Identity = 104/181 (57.46%), Postives = 133/181 (73.48%), Query Frame = 3 Query: 57 PEKSQPL-------GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 P + +PL GT++AAPWGSA IL ISY YI MMG+ GL A++IAILNANY+A +L H+P+L+R G VAHE I+D R LK + G+ +D+AKRL+DYGFH PTMS+PVPGTLMIEPTESESK E+DR+CDA+I+IR EIAQ+E G+ I + L+ APH + WT+PY Sbjct: 756 PAEGEPLNGGLHGGGTVSAAPWGSASILTISYIYILMMGAAGLKRATEIAILNANYIAAKLHPHFPVLYRNPRGRVAHECIIDPRALKTSTGVTVDDIAKRLIDYGFHAPTMSFPVPGTLMIEPTESESKAEIDRFCDAMIAIRREIAQVEAGRYPIEQSPLRHAPHTAHDVTSAEWTRPY 936
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_BRAJA (Glycine dehydrogenase [decarboxylating] OS=Bradyrhizobium japonicum GN=gcvP PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 7.663e-56 Identity = 103/178 (57.87%), Postives = 133/178 (74.72%), Query Frame = 3 Query: 45 GIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 G PA P+G ++AAP+GSA IL ISY YI MMG +GL A++IAILNANY+A RL+ H+P+L++ G VAHE IVD R LK T+G+ +D+AKRL+DYGFH PTMS+PVPGTLMIEPTESESK ELDR+CDA+I+IR+EI ++E G+ I + L+ APH + D W + Y Sbjct: 730 GHPATRGDAPVGPVSAAPFGSASILTISYIYILMMGGEGLKRATEIAILNANYIAARLDAHFPVLYKNARGRVAHECIVDPRALKTTSGVTVDDIAKRLIDYGFHAPTMSFPVPGTLMIEPTESESKAELDRFCDAMIAIRKEIGEVEAGRFKIEASPLRHAPHTVHDIADDAWARAY 907
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_SYNY3 (Glycine dehydrogenase [decarboxylating] OS=Synechocystis sp. (strain PCC 6803) GN=gcvP PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.307e-55 Identity = 112/190 (58.95%), Postives = 138/190 (72.63%), Query Frame = 3 Query: 12 LSAFHPVVSTGGIPAPE-KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 L AF P S + + Q +G I+AAP+GSA IL IS+ YIAMMG +GLT+A+++AIL+ANYMAKRLE +YPILFRG N VAHE I+DLR LK A IE EDVAKRLMD+GFH PT+SWPV GT+M+EPTESES ELDR+CDA+I+I +E I +G+ D +N LK APH L+ W PY Sbjct: 748 LQAFLPRTSLNSTAELQAEDQSIGMISAAPYGSASILVISWMYIAMMGPQGLTKATEVAILSANYMAKRLENYYPILFRGNNELVAHECILDLRPLKKQAAIEVEDVAKRLMDFGFHAPTVSWPVLGTMMVEPTESESLGELDRFCDAMIAIYQEAQAITHGEIDPADNPLKNAPHTAQSLICGEWNHPY 937
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_BURTA (Glycine dehydrogenase [decarboxylating] OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=gcvP PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.307e-55 Identity = 102/168 (60.71%), Postives = 134/168 (79.76%), Query Frame = 3 Query: 75 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL HYP+L+ G G VAHE I+DLR +K+++GI +DVAKRLMDYGFH PTMS+PVPGTLM+EPTESES+EELDR+ A+I+IR+EI +E G+AD +N L+ APH +++ + W Y Sbjct: 764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKDSSGITVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESQEELDRFVAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAY 931
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_BURS3 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia sp. (strain 383) GN=gcvP PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.307e-55 Identity = 102/168 (60.71%), Postives = 133/168 (79.17%), Query Frame = 3 Query: 75 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL HYP+L+ G G VAHE I+DLR +K ++GI +DVAKRLMDYGFH PTMS+PVPGTLM+EPTESES+EELDR+ A+I+IR+EI +E G+AD +N L+ APH +++ + W Y Sbjct: 764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKESSGISVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESQEELDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVVTANEWLHAY 931
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_BURPS (Glycine dehydrogenase [decarboxylating] OS=Burkholderia pseudomallei GN=gcvP PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.307e-55 Identity = 102/168 (60.71%), Postives = 134/168 (79.76%), Query Frame = 3 Query: 75 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL HYP+L+ G G VAHE I+DLR +K+++GI +DVAKRLMDYGFH PTMS+PVPGTLM+EPTESES+EELDR+ A+I+IR+EI +E G+AD +N L+ APH +++ + W Y Sbjct: 764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKDSSGITVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESQEELDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAY 931
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_BURP6 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia pseudomallei (strain 668) GN=gcvP PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.307e-55 Identity = 102/168 (60.71%), Postives = 134/168 (79.76%), Query Frame = 3 Query: 75 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL HYP+L+ G G VAHE I+DLR +K+++GI +DVAKRLMDYGFH PTMS+PVPGTLM+EPTESES+EELDR+ A+I+IR+EI +E G+AD +N L+ APH +++ + W Y Sbjct: 764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKDSSGITVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESQEELDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAY 931
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_BURP1 (Glycine dehydrogenase [decarboxylating] OS=Burkholderia pseudomallei (strain 1710b) GN=gcvP PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.307e-55 Identity = 102/168 (60.71%), Postives = 134/168 (79.76%), Query Frame = 3 Query: 75 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 +G ++AAP+GSA ILPIS+ YIAMMG+K LT A++ AILNANY+AKRL HYP+L+ G G VAHE I+DLR +K+++GI +DVAKRLMDYGFH PTMS+PVPGTLM+EPTESES+EELDR+ A+I+IR+EI +E G+AD +N L+ APH +++ + W Y Sbjct: 764 IGAVSAAPYGSASILPISWMYIAMMGAKNLTAATETAILNANYIAKRLAPHYPVLYSGPGGLVAHECILDLRPIKDSSGITVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESQEELDRFIAAMIAIRDEIRAVEEGRADREDNPLRHAPHTAAVVTANEWPHAY 931 The following BLAST results are available for this feature:
BLAST of CX296299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 368
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296299 ID=CX296299; Name=CX296299; organism=Citrus clementina; type=EST; length=578bpback to top |