CX296299
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_RALPJ (Glycine dehydrogenase [decarboxylating] OS=Ralstonia pickettii (strain 12J) GN=gcvP PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 3.559e-53 Identity = 99/173 (57.23%), Postives = 135/173 (78.03%), Query Frame = 3 Query: 60 EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 + SQ +G ++A+ +GSA ILPIS+ YIAMMG+ GLT A++ AIL+ANY+AKRL +YP+L+ G +G VAHE I+D+R L+ +GI ED+AKRLMD+GFH PTMS+PVPGTLMIEPTESE K ELDR+ DA+I+IR E+ ++ +G+ D +N LK APH +++M D W+ Y Sbjct: 761 DASQNIGNVSASAFGSASILPISWMYIAMMGAAGLTAATETAILSANYVAKRLAPYYPVLYTGAHGLVAHECILDIRPLQKESGISNEDIAKRLMDFGFHAPTMSFPVPGTLMIEPTESEPKVELDRFIDAMIAIRGEVDKVISGEFDREDNPLKHAPHTAAVVMADDWSHKY 933
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_PSEU5 (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas stutzeri (strain A1501) GN=gcvP PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 3.559e-53 Identity = 111/192 (57.81%), Postives = 140/192 (72.92%), Query Frame = 3 Query: 3 LGTLSAFHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 L A HPVV G P P G ++AAPWGSA ILPIS+ YIAMMG + L +A+++AIL ANY+A RL +P+L+ G NG VAHE I+DLR LK +GI EDVAKRLMDYGFH PTMS+PVPGTLMIEPTESESK ELDR+ +A++SIR EIA++++G+ NN L APH + ++G+ W +PY Sbjct: 729 LAPFVANHPVVELEG-PQPGN----GAVSAAPWGSASILPISWMYIAMMGPQ-LRDATEVAILGANYLANRLGGAFPVLYSGRNGRVAHECILDLRPLKAASGISEEDVAKRLMDYGFHAPTMSFPVPGTLMIEPTESESKAELDRFVEAMLSIRAEIAKVQDGEWPADNNPLVRAPHTLADVIGE-WDRPY 913
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP2_COLP3 (Glycine dehydrogenase [decarboxylating] 2 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=gcvP2 PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 3.559e-53 Identity = 102/177 (57.63%), Postives = 131/177 (74.01%), Query Frame = 3 Query: 48 IPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 +P + +G ++A GSA ILPIS+ YIA+MG++GL A+++AILNANY+ ++L HYPILFRG G VAHE I+DLR LK ++GI EDVAKRLMD+GFH PTMS+PV GTLMIEPTESES EELD++ DALI+IR EIA++E G + +N L APH + L G W + Y Sbjct: 732 LPGHSVTNTVGAVSATALGSASILPISWAYIALMGAEGLKSATELAILNANYIMEKLSPHYPILFRGKQGRVAHECIIDLRPLKESSGISEEDVAKRLMDFGFHAPTMSFPVAGTLMIEPTESESLEELDKFIDALITIRHEIAKVEEGTWTLADNPLVNAPHTLNDLTGSDWPRAY 908
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_AGRT5 (Glycine dehydrogenase [decarboxylating] OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=gcvP PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 4.649e-53 Identity = 98/167 (58.68%), Postives = 130/167 (77.84%), Query Frame = 3 Query: 78 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 G ++AAP+GS ILPIS++Y MMG +GLT+A+K+AILNANY+A+RL+ Y +L++ G VAHE I+D R L ++ G+ +DVAKRL+D GFH PTMSWPV GTLMIEPTESE+K E+DR+CDA+++IREE IE G+AD +NN LK APH L+G+ W +PY Sbjct: 741 GAVSAAPFGSPSILPISWSYCLMMGGEGLTQATKVAILNANYIAERLKGAYDVLYKSETGRVAHECIIDTRPLADSCGVTVDDVAKRLIDCGFHAPTMSWPVAGTLMIEPTESETKAEIDRFCDAMLAIREEARDIEEGRADKNNNPLKNAPHTVEDLVGE-WDRPY 906
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_PSYIN (Glycine dehydrogenase [decarboxylating] OS=Psychromonas ingrahamii (strain 37) GN=gcvP PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 7.930e-53 Identity = 103/165 (62.42%), Postives = 124/165 (75.15%), Query Frame = 3 Query: 84 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 ++AA GSA ILPISY YIAMMG +GLT A++IAILNANY+ +RL HYPIL++G G VAHE I+D+R L+ +GI ED+AKRLMDYGFH PTMS+PV GT MIEPTESES ELDR+CDA+I+IR EI QIE+G+ +N L APH LM WT Y Sbjct: 756 VSAAELGSASILPISYAYIAMMGEQGLTSATQIAILNANYIMERLRPHYPILYQGKEGRVAHECIIDIRPLEAASGISNEDIAKRLMDYGFHAPTMSFPVGGTFMIEPTESESTAELDRFCDAMIAIRHEIKQIEDGEWSATDNPLVNAPHTQVDLMESEWTHGY 920
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_BORA1 (Glycine dehydrogenase [decarboxylating] OS=Bordetella avium (strain 197N) GN=gcvP PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 9.092e-53 Identity = 95/168 (56.55%), Postives = 130/168 (77.38%), Query Frame = 3 Query: 75 LGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 +G ++AAP+GSA IL I + YI++MG++GL A+++AILNANY+A RL ++YP+L+ G +G VAHE I+D+R LK + GI ED+AKRLMDYGFH PTMS+PV GTLM+EPTESE EL+R+ DA+I+IR E+AQ+E G+ D +NVLK APH +L+ + W Y Sbjct: 744 VGPVSAAPYGSAGILAIPFVYISLMGAEGLRRATEVAILNANYVATRLREYYPVLYAGRHGRVAHECILDIRPLKESIGISAEDIAKRLMDYGFHAPTMSFPVAGTLMVEPTESEGLAELERFIDAMIAIRAEVAQVERGERDREDNVLKNAPHTAQMLLAEEWHHAY 911 HSP 2 Score: 21.557 bits (44), Expect = 9.092e-53 Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 1 Query: 1 HLAPFLPSIL 30 HLAP+LP +L Sbjct: 723 HLAPYLPGVL 732
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_RHIEC (Glycine dehydrogenase [decarboxylating] OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=gcvP PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.353e-52 Identity = 100/174 (57.47%), Postives = 132/174 (75.86%), Query Frame = 3 Query: 57 PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 PE G ++AAP+GSA ILPIS++Y MMG +GLT+A+K+AILNANY+A RL+ Y +L++ G VAHE I+D R L +++G+ +DVAKRL+D GFH PTMSWPV GTLMIEPTESE+K ELDR+C+A+++IREE IE+G+ D NN LK APH L+G+ W +PY Sbjct: 734 PETDGRPGAVSAAPFGSASILPISWSYCLMMGGEGLTQATKVAILNANYIATRLKGAYNVLYKSKTGRVAHECIIDTRPLVDSSGVTVDDVAKRLIDCGFHAPTMSWPVAGTLMIEPTESETKAELDRFCEAMLAIREEARAIEDGRMDKTNNPLKNAPHTVEDLVGE-WDRPY 906
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_DECAR (Glycine dehydrogenase [decarboxylating] OS=Dechloromonas aromatica (strain RCB) GN=gcvP PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 1.767e-52 Identity = 105/192 (54.69%), Postives = 133/192 (69.27%), Query Frame = 3 Query: 3 LGTLSAFHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 L A H V TG Q G ++AAP+GSA IL IS+ Y+AM+G G+ +A+++AILNANY+AK+L HYP+L+ G NG VAHE I+D+R +K GI D+AKRLMDYGFH PT+S+PV GT+M+EPTESESK ELDR+ A+I+IREEI QIENG NN LK APH + +M W PY Sbjct: 729 LAPFMADHVVQPTGDANRVNAGQ--GAVSAAPFGSASILTISWMYLAMLGGAGVKKATQVAILNANYVAKQLNAHYPVLYVGKNGRVAHECILDIRPIKAATGIAEIDIAKRLMDYGFHAPTVSFPVAGTIMVEPTESESKAELDRFIGAMIAIREEIRQIENGVWTADNNPLKNAPHSQADVMDAEWKHPY 918
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_AZOSE (Glycine dehydrogenase [decarboxylating] OS=Azoarcus sp. (strain EbN1) GN=gcvP PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 1.767e-52 Identity = 106/195 (54.36%), Postives = 134/195 (68.72%), Query Frame = 3 Query: 3 LGTLSAFHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLM---GDTWTKPY 578 L A H V +TG P K Q G ++AAP+GSA ILPIS+ YIAMMG GL A+++AILNANY+A RL +HYP+L+ G G VAHE I+D+R +K GI D+AKRLMDYGFH PTMS+PV GT+MIEPTESE ELDR+ A+I+IR EI ++ENG +N LK APH + + G W++PY Sbjct: 735 LAPFMADHVVAATGDETRPNKGQ--GAVSAAPFGSASILPISWMYIAMMGDTGLKLATEVAILNANYVANRLAEHYPVLYTGSQGRVAHECILDIRPIKANTGISEVDIAKRLMDYGFHAPTMSFPVAGTIMIEPTESEDLGELDRFIAAMITIRNEIREVENGAWPTDDNPLKNAPHTQADFIAADGAQWSRPY 927
BLAST of CX296299 vs. ExPASy Swiss-Prot
Match: GCSP_XANOM (Glycine dehydrogenase [decarboxylating] OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=gcvP PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 2.307e-52 Identity = 102/191 (53.40%), Postives = 135/191 (70.68%), Query Frame = 3 Query: 6 GTLSAFHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPY 578 G +A H G + S+ G ++AA +GSA ILPIS+ Y+ MMGS GL +A+++A+LNANY+AKRL HY L+ G NG VAHE I+D+R L+ T+GI ED+AKRL+D+GFH PT+S+PV GTLM+EPTESES+ ELDR+ DA+I IREEI IE+G+ D +N LK APH + + WT Y Sbjct: 738 GQTAAIHGGGFNSGSGSGHSSRIGGMVSAAAYGSASILPISWMYVTMMGSAGLRKATQVALLNANYIAKRLAPHYKTLYTGRNGLVAHECILDVRPLEKTSGIGAEDIAKRLIDFGFHAPTLSFPVAGTLMVEPTESESQHELDRFIDAMIQIREEIRAIEDGRLDREDNPLKHAPHTATQVSASEWTHAY 928 The following BLAST results are available for this feature:
BLAST of CX296299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 368
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296299 ID=CX296299; Name=CX296299; organism=Citrus clementina; type=EST; length=578bpback to top |