CX296300

Overview
NameCX296300
Unique NameCX296300
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296300 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.495e-30
Identity = 69/216 (31.94%), Postives = 115/216 (53.24%), Query Frame = 2
Query:   29 EEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCV 676
            EEF NE++L +++ H N++++LG C++T+  +L+YEY+P   L   L D      + W+ R                 +   I HRD+K +NILLDE  + K+SDFG +R    D     T  + GT GY+ PEY     Y+ KSDVYSFGV+ +++I+G +   R    E   L  +  E  K+ + ++++D  + D     +++   ++A  C+
Sbjct:  468 EEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHLTT-LVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGRGLATHFLEAMKENRVIDIIDIRIKDESKLEQVMAVAKLARKCL 682          
BLAST of CX296300 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.495e-30
Identity = 75/220 (34.09%), Postives = 116/220 (52.73%), Query Frame = 2
Query:   20 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRR--LILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLC 673
            QG  EF  E+    +L+H NL+ + G+C    + +LIY+Y+P  SLD  L+   RR   +L W  R               E     +IHRD+K SN+L+D D+ P++ DFGLAR++ +   ++ T  +VGT GY+ PE    G  S+ SDV++FGVL L+I+SGR    +   +    + ++  EL   G+ +  +D  L   +   +    L V LLC
Sbjct:  400 QGVREFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGS-QSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGR----KPTDSGTFFIADWVMELQASGEILSAIDPRLGSGYDEGEARLALAVGLLC 614          
BLAST of CX296300 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.564e-30
Identity = 78/226 (34.51%), Postives = 121/226 (53.54%), Query Frame = 2
Query:   20 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLF-----DPIRRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQE 682
            QG  EF+ E+ + +KL+H +L+ ++GFC + +E +L+YEYM    L   L+     DP     L WK+R                 +   IIHRD+K +NILLDE+L  K+SDFGL++    D+   +T  + G+ GY+ PEY  R   + KSDVYSFGV+  +++  R +       E ++L EYA  L + G   +++D  +  T S   L   ++ A  C+ E
Sbjct:  561 QGINEFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPMDEGHVST-AVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVINPQLPREQVNLAEYAMNLHRKGMLEKIIDPKIVGTISKGSLRKFVEAAEKCLAE 785          
BLAST of CX296300 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.564e-30
Identity = 73/222 (32.88%), Postives = 122/222 (54.95%), Query Frame = 2
Query:   20 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQEN 685
            QG  EFK EV +  + +H +L+ ++G+C +  E +++YEYM K +L   L+D   +  L W++R                 S   IIHRD+K +NILLD++   K++DFGL++     D    +  + G+ GY+ PEY+ R   + KSDVYSFGV+ L+++ GR +       E ++L+E+A +L K GK  +++D  L       ++    +V   C+ +N
Sbjct:  523 QGLAEFKTEVEMLTQFRHRHLVSLIGYCDENSEMIIVYEYMEKGTLKDHLYDLDDKPRLSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGRPVIDPSLPREKVNLIEWAMKLVKKGKLEDIIDPFLVGKVKLEEVKKYCEVTEKCLSQN 744          
BLAST of CX296300 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 4.564e-30
Identity = 76/228 (33.33%), Postives = 126/228 (55.26%), Query Frame = 2
Query:   11 RIHQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFD-PIRRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLF--IRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQEN 685
            R   G  +F+ EV + +   H NL+R+ GFC+   E +L+Y YM   S+   L + P     LDW KR               ++    IIH D+K +NILLDE+ +  + DFGLA++   +D    T  + GT G+I PEY+  G  S K+DV+ +GV+ L++I+G++ F   R   ++++ L+++  E+ K+ K   L+DA L+  +   ++   +Q+ALLC Q +
Sbjct:  309 RTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTT-AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSS 535          
BLAST of CX296300 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.564e-30
Identity = 77/223 (34.53%), Postives = 117/223 (52.47%), Query Frame = 2
Query:   20 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRR--LILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQE 682
            QG  EF  E+    KL+H NL+ + G+C    + +LIY+Y+P  SLD  L+   RR   +L W  R               E     +IHRD+K SN+L+D  + P++ DFGLAR++ +  L + T  +VGT GY+ PE    G  S+ SDV++FGVL L+I+ GR    +   +    LV++  EL  +G+ +  +D  L   +   +    L V LLC  +
Sbjct:  403 QGVREFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTL-SETTALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGR----KPTDSGTFFLVDWVMELHANGEILSAIDPRLGSGYDGGEARLALAVGLLCCHQ 620          
BLAST of CX296300 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.961e-30
Identity = 76/221 (34.39%), Postives = 118/221 (53.39%), Query Frame = 2
Query:   20 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSL-DYFLFDPIRRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQ 679
            QG  EF NE+ L + +QH NL+ +LG+C +  + +L+Y +M   SL D    +P +R ILDW  R                +   ++IHRD+K SNILLD  +  K++DFG ++   ++     +  + GT GY+ PEY      S KSDV+SFGV+ L+I+SGR            SLVE+A    +  K  E++D  +   + +  L   ++VAL C++
Sbjct:  631 QGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLE 851          
BLAST of CX296300 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.786e-30
Identity = 78/223 (34.98%), Postives = 121/223 (54.26%), Query Frame = 2
Query:   17 HQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRRLI--LDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGM-ELMDASLDDTHSSWKLLTCLQVALLCV 676
            +QG +E+  EV    +L H NL++++G+C++ +  +L+YE+MPK SL+  LF   RR    L W  R               + ++  +I+RD K +NILLD +   K+SDFGLA+     D    + +++GT GY  PEYV  G  + KSDVYSFGV+ L+++SGRR   +       SLV++A     D + +  +MD  L   +      T   +AL C+
Sbjct:  128 YQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLF---RRGAQPLTWAIRMKVAIGAAKGLTFLHD-AKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCL 346          
BLAST of CX296300 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 130.183 bits (326), Expect = 1.017e-29
Identity = 75/219 (34.25%), Postives = 116/219 (52.97%), Query Frame = 2
Query:   32 EFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRR-LILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQEN 685
            EF+ EV   ++ QH NL+ + GFC    + +LIY YM   SLDY+L +      +L WK R               E     I+HRD+K SNILLDE+    ++DFGLAR+    +   +T+ +VGT GYIPPEY    V + K DVYSFGV+ L++++ +R            L+ +  ++  + +  E+ D  +    +  ++   L++A LC+ EN
Sbjct:  774 EFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTD-LVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDMCKPKGCRDLISWVVKMKHESRASEVFDPLIYSKENDKEMFRVLEIACLCLSEN 991          
BLAST of CX296300 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.328e-29
Identity = 81/222 (36.49%), Postives = 123/222 (55.41%), Query Frame = 2
Query:   20 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLD---DTHSSWKLLTCLQVALLCV 676
            QG++EFK EV L  ++ H  L+ ++G+C D     LIYE M K +L   L       +L W  R                  +  I+HRD+K +NILL E+ + KI+DFGL+R F+  + EA    + GT GY+ PEY    + S KSDVYSFGV+ L+IISG+ +       EN ++VE+   + ++G    ++D +L    DT S+WK+   +++A+ CV
Sbjct:  595 QGYKEFKTEVELLLRVHHEKLVSLIGYCDDDNGLALIYELMGKGNLKEHLSGKPGCSVLSWPIRLKIALESAIGIEYLHTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLSRSFLIGN-EAQPTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVIDL--SRENCNIVEWTSFILENGDIESIVDPNLHQDYDTSSAWKV---VELAMSCV 810          
The following BLAST results are available for this feature:
BLAST of CX296300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 345
Match NameE-valueIdentityDescription
WAKLA_ARATH3.495e-3031.94Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
LRKA3_ARATH3.495e-3034.09Lectin-domain containing receptor kinase A4.3 OS=A... [more]
Y5613_ARATH4.564e-3034.51Probable receptor-like protein kinase At5g61350 OS... [more]
Y2393_ARATH4.564e-3032.88Probable receptor-like protein kinase At2g39360 OS... [more]
SERK5_ARATH4.564e-3033.33Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
LRKA1_ARATH4.564e-3034.53Lectin-domain containing receptor kinase A4.1 OS=A... [more]
NORK_PEA5.961e-3034.39Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
APK2B_ARATH7.786e-3034.98Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
PSKR1_ARATH1.017e-2934.25Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
Y1755_ARATH1.328e-2936.49Probable LRR receptor-like serine/threonine-protei... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05138E09SK FerrChloL1 Citrus clementina cDNA clone C05138E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296300 ID=CX296300; Name=CX296300; organism=Citrus clementina; type=EST; length=685bp
GACGAGGCGAAGAATCCACCAAGGATTTGAGGAGTTCAAGAATGAGGTTA
TGCTTACTGCAAAGCTTCAACACGTAAATCTGATCCGAGTTTTGGGTTTT
TGCATCGACACACAAGAAAATATGCTCATCTATGAGTATATGCCAAAACG
AAGCCTAGACTATTTCCTTTTTGATCCCATCAGAAGGCTTATTTTGGATT
GGAAAAAACGTATTCATATCATTCAAGGAATTATTCAGGGGCTTCTCTAT
CTCCAAGAATATTCTAGATTAACAATTATTCATCGAGACTTAAAAGTTAG
TAATATTTTGTTGGATGAAGATTTGAAACCTAAAATATCAGATTTTGGCT
TGGCTAGAATTTTTGTGAAAGATGATCTTGAAGCAAACACGAATCGAATT
GTTGGAACACAAGGCTATATTCCTCCTGAATATGTTGGAAGAGGTGTTTA
CTCCACTAAATCTGATGTCTACAGTTTTGGGGTTTTGTTTCTACAAATTA
TAAGTGGAAGAAGACTTTTCATTCGATATGGTCAAAATGAAAATCTAAGC
CTTGTAGAGTATGCTTACGAGTTGTGGAAGGATGGGAAAGGCATGGAGTT
AATGGATGCATCACTAGATGATACGCATTCCTCATGGAAATTATTGACAT
GTCTGCAAGTAGCTTTGCTATGTGTTCAGGAGAAC
back to top