CX296300

Overview
NameCX296300
Unique NameCX296300
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296300 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.328e-29
Identity = 68/216 (31.48%), Postives = 118/216 (54.63%), Query Frame = 2
Query:   29 EEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCV 676
            EEF NEV++ A++ H N++++LG C++T+  +L+YE++P   L   L D      + W+ R                 +   I HRD+K +NILLDE  + K+SDFG +R    D     T ++ GT GY+ PEY     ++ KSDVYSFGV+ +++++G +   R    EN  L  +  E  K+ + ++++D  + D  +  ++++   +A  C+
Sbjct:  455 EEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLHDESDDYTMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHLTT-QVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPSSRVRSEENRGLAAHFVEAVKENRVLDIVDDRIKDECNMDQVMSVANLARRCL 669          
BLAST of CX296300 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.328e-29
Identity = 82/239 (34.31%), Postives = 127/239 (53.14%), Query Frame = 2
Query:   20 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPI---RRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKL---------------LTCLQVALLCVQE 682
            QG  EF  E+    K++H NL+ +LG+C   +E +L+YE+M   SL+  L  P    +R IL W++R                     IIHRD+K SN+LLD+D++ ++SDFG+AR+    D   + + + GT GY+PPEY      + K DVYS GV+ L+I+SG+R   +  +  + +LV ++    ++GK ME++D  L    SS  L               L  L++AL CV +
Sbjct:  874 QGDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVLHGPRTGEKRRILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSIGVVMLEILSGKRPTDK-EEFGDTNLVGWSKMKAREGKHMEVIDEDLLKEGSSESLNEKEGFEGGVIVKEMLRYLEIALRCVDD 1111          
BLAST of CX296300 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.734e-29
Identity = 73/220 (33.18%), Postives = 120/220 (54.55%), Query Frame = 2
Query:   20 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRRLI-LDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCV 676
            Q  +EFK EV +  +++H NL+R+LG+C++    ML+Y+++   +L+ ++   +  +  L W  R               E     ++HRD+K SNILLD     K+SDFGLA++   +     T R++GT GY+ PEY   G+ + KSD+YSFG+L ++II+GR            +LV++   +  + +  E++D  + +  SS  L   L VAL CV
Sbjct:  190 QAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTT-RVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKSMVGNRRSEEVVDPKIPEPPSSKALKRVLLVALRCV 408          
BLAST of CX296300 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.734e-29
Identity = 79/224 (35.27%), Postives = 122/224 (54.46%), Query Frame = 2
Query:   20 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRRLI----LDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYE-LWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCV 676
            QG +E+  EV    +  H +L++++G+C++ +  +L+YE+MP+ SL+  LF   RR +    L WK R                 S   +I+RD K SNILLD +   K+SDFGLA+     D    + R++GT GY  PEY+  G  +TKSDVYSFGV+ L+++SGRR   +   +   +LVE+A   L    K   ++D  L D +S  +      ++L C+
Sbjct:  114 QGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLF---RRGLYFQPLSWKLRLKVALGAAKGLAFLHS-SETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCL 333          
BLAST of CX296300 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.265e-29
Identity = 75/221 (33.94%), Postives = 122/221 (55.20%), Query Frame = 2
Query:   32 EFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFD-PIRRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLF--IRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQEN 685
            +F+ EV + +   H NL+R+ GFC+   E +L+Y YM   S+   L + P  +L L W  R               ++    IIHRD+K +NILLDE+ +  + DFGLAR+    D    T  + GT G+I PEY+  G  S K+DV+ +G++ L++I+G+R F   R   ++++ L+++   L K+ K   L+D  L   ++  ++   +QVALLC Q +
Sbjct:  346 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTT-AVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSS 565          
BLAST of CX296300 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.265e-29
Identity = 80/224 (35.71%), Postives = 118/224 (52.68%), Query Frame = 2
Query:   14 IHQGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLF--DPIRRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQ 679
            + +  +EF NE+ L ++L H +L+ +LG+C D  E +L+YE+M   SL   L   DP  +  L+W +R                Y+   +IHRD+K SNIL+DED   +++DFGL+ +   D     +    GT GY+ PEY      +TKSDVYSFGV+ L+I+SGR+      Q E  ++VE+A  L K G    ++D  L        L     VA  CV+
Sbjct:  541 VKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVADFGLSILGPADSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAIDM--QFEEGNIVEWAVPLIKAGDIFAILDPVLSPPSDLEALKKIASVACKCVR 762          
BLAST of CX296300 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 2.959e-29
Identity = 68/216 (31.48%), Postives = 117/216 (54.17%), Query Frame = 2
Query:   29 EEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCV 676
            EEF NEV++ A++ H N++++LG C++T+  +L+YE++P   L   L D     I+ W+ R                 +   I HRD+K +NILLDE  + K+SDFG +R    D     T ++ GT GY+ PEY     ++ KSDVYSFGV+ +++I+G+    R    EN     +     K+ + ++++D  + D  +  +++   ++A  C+
Sbjct:  463 EEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLRDECDDYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTT-QVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGKNPSSRVQSEENRGFAAHFVAAVKENRFLDIVDERIKDECNLDQVMAVAKLAKRCL 677          
BLAST of CX296300 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 2.959e-29
Identity = 75/219 (34.25%), Postives = 120/219 (54.79%), Query Frame = 2
Query:   32 EFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFD-PIRRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLF--IRYGQNENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQ 679
            +F+ EV + +   H NL+R+ GFC+   E +L+Y YM   S+   L + P  +  LDW  R               ++    IIHRD+K +NILLDE+ +  + DFGLA++    D    T  + GT G+I PEY+  G  S K+DV+ +G++ L++I+G+R F   R   ++++ L+++   L K+ K   L+D  L   +   +L   +QVALLC Q
Sbjct:  343 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT-AVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELEQVIQVALLCTQ 560          
BLAST of CX296300 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 2.959e-29
Identity = 78/224 (34.82%), Postives = 121/224 (54.02%), Query Frame = 2
Query:   20 QGFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRR----LILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQNENLSLVEYAYELWKDGKGM-ELMDASLDDTHSSWKLLTCLQVALLCV 676
            QG +E+  EV    +  H NL++++G+C++ +  +L+YE+MP+ SL+  LF   RR      L W  R                 +  ++I+RD K SNILLD +   K+SDFGLA+     D    + RI+GT GY  PEY+  G  +TKSDVYS+GV+ L+++SGRR   +        LVE+A  L  + + +  ++D  L D +S  +      +AL C+
Sbjct:  115 QGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLF---RRGSYFQPLSWTLRLKVALGAAKGLAFLHN-AETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCL 334          
BLAST of CX296300 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.864e-29
Identity = 77/221 (34.84%), Postives = 122/221 (55.20%), Query Frame = 2
Query:   23 GFEEFKNEVMLTAKLQHVNLIRVLGFCIDTQENMLIYEYMPKRSLDYFLFDPIRRLILDWKKRXXXXXXXXXXXXXXXEYSRLTIIHRDLKVSNILLDEDLKPKISDFGLARIFVKDDLEANTNRIVGTQGYIPPEYVGRGVYSTKSDVYSFGVLFLQIISGRRLFIRYGQ--NENLSLVEYAYELWKDGKGMELMDASLDDTHSSWKLLTCLQVALLCVQ 679
            G  +F+ E+ + +   H NL+R++G+C  + E +L+Y YM   S+   L     +  LDW  R               E     IIHRD+K +NILLDE  +  + DFGLA++   +D    T  + GT G+I PEY+  G  S K+DV+ FG+L L++I+G R  + +G+  ++  +++E+  +L K+ K  EL+D  L  T+   ++   LQVALLC Q
Sbjct:  337 GNSQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLK---AKPALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTT-AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRA-LEFGKSVSQKGAMLEWVRKLHKEMKVEELVDRELGTTYDRIEVGEMLQVALLCTQ 552          
The following BLAST results are available for this feature:
BLAST of CX296300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 345
Match NameE-valueIdentityDescription
WAKLB_ARATH1.328e-2931.48Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
BRL2_ARATH1.328e-2934.31Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
Y1154_ARATH1.734e-2933.18Probable serine/threonine-protein kinase At1g01540... [more]
APK1A_ARATH1.734e-2935.27Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
SERK2_ARATH2.265e-2933.94Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
CRI4_MAIZE2.265e-2935.71Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
WAKLD_ARATH2.959e-2931.48Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
SERK1_ARATH2.959e-2934.25Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
APK1B_ARATH2.959e-2934.82Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
Y2239_ARATH3.864e-2934.84Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC05138E09SK FerrChloL1 Citrus clementina cDNA clone C05138E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296300 ID=CX296300; Name=CX296300; organism=Citrus clementina; type=EST; length=685bp
GACGAGGCGAAGAATCCACCAAGGATTTGAGGAGTTCAAGAATGAGGTTA
TGCTTACTGCAAAGCTTCAACACGTAAATCTGATCCGAGTTTTGGGTTTT
TGCATCGACACACAAGAAAATATGCTCATCTATGAGTATATGCCAAAACG
AAGCCTAGACTATTTCCTTTTTGATCCCATCAGAAGGCTTATTTTGGATT
GGAAAAAACGTATTCATATCATTCAAGGAATTATTCAGGGGCTTCTCTAT
CTCCAAGAATATTCTAGATTAACAATTATTCATCGAGACTTAAAAGTTAG
TAATATTTTGTTGGATGAAGATTTGAAACCTAAAATATCAGATTTTGGCT
TGGCTAGAATTTTTGTGAAAGATGATCTTGAAGCAAACACGAATCGAATT
GTTGGAACACAAGGCTATATTCCTCCTGAATATGTTGGAAGAGGTGTTTA
CTCCACTAAATCTGATGTCTACAGTTTTGGGGTTTTGTTTCTACAAATTA
TAAGTGGAAGAAGACTTTTCATTCGATATGGTCAAAATGAAAATCTAAGC
CTTGTAGAGTATGCTTACGAGTTGTGGAAGGATGGGAAAGGCATGGAGTT
AATGGATGCATCACTAGATGATACGCATTCCTCATGGAAATTATTGACAT
GTCTGCAAGTAGCTTTGCTATGTGTTCAGGAGAAC
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