CX296301
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296301 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.137e-12 Identity = 41/96 (42.71%), Postives = 52/96 (54.17%), Query Frame = 3 Query: 186 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRGSKAILNFPLEAGKCDSNAAVARECDSSAEAGACETKRKRDCESEEE 473 YRGVR+RPWGK+AAEIRDP +R RVWLGTF+T RG +A LNFP ++ VA + D A+A A + D E+ Sbjct: 136 YRGVRQRPWGKFAAEIRDP-KRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFVDYTSSVSSPVAAD-DIGAKASASASVSATDSVEAEQ 229
BLAST of CX296301 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 8.015e-12 Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 3 Query: 186 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRGSKAILNFPLE 365 YRG+R+RPWGK+AAEIRDP R+G R WLGTFDT ++RG+KA +NFP E Sbjct: 128 YRGIRQRPWGKWAAEIRDP-RKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPEE 186
BLAST of CX296301 vs. ExPASy Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.015e-12 Identity = 35/59 (59.32%), Postives = 39/59 (66.10%), Query Frame = 3 Query: 183 HYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRGSKAILNFP 359 HYRGVR+RPWG+YAAEIRDP ++ RVWLGTFDT LRG KA NFP Sbjct: 11 HYRGVRKRPWGRYAAEIRDPWKK-TRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFP 68
BLAST of CX296301 vs. ExPASy Swiss-Prot
Match: ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.047e-11 Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = 3 Query: 186 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRGSKAILNFP 359 YRGVR+RPWG+YAAEIRDP ++ RVWLGTFDT + RG+KA NFP Sbjct: 20 YRGVRKRPWGRYAAEIRDPFKKS-RVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFP 76
BLAST of CX296301 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.367e-11 Identity = 38/82 (46.34%), Postives = 51/82 (62.20%), Query Frame = 3 Query: 186 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRGSKAILNF---PLEAGKCDSNAAVARECDSSAE 422 +RG+R+RPWGK+AAEIRDP R+GVRVWLGTF++ ++RG KA +NF P A K + + A+ SS E Sbjct: 120 FRGIRQRPWGKWAAEIRDP-RKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFPEAPTTAQKRRAGSTTAKAPKSSVE 200
BLAST of CX296301 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.367e-11 Identity = 45/120 (37.50%), Postives = 57/120 (47.50%), Query Frame = 3 Query: 186 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRGSKAILNFPLEAGKCDSNAAVARECDSSAEAGACETKRKRDCESEEEERKAKVVKTESADTVNEFPLTPAS 545 YRGVR+RPWGK+AAEIRDP + RVWLGTFD + RG+KA LNFP N + R + A+ +T +R +S S T P+ PAS Sbjct: 185 YRGVRQRPWGKWAAEIRDPF-KAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFP-------ENVKLVRPASTEAQP-VHQTAAQRPTQSR-----------NSGSTTTLLPIRPAS 284
BLAST of CX296301 vs. ExPASy Swiss-Prot
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.978e-11 Identity = 33/58 (56.90%), Postives = 38/58 (65.52%), Query Frame = 3 Query: 186 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRGSKAILNFP 359 YRGVR+RPWG+YAAEIRDP ++ RVWLGTFDT RG+KA NFP Sbjct: 25 YRGVRKRPWGRYAAEIRDPGKK-TRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFP 81
BLAST of CX296301 vs. ExPASy Swiss-Prot
Match: ERF83_ARATH (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.195e-11 Identity = 32/60 (53.33%), Postives = 40/60 (66.67%), Query Frame = 3 Query: 186 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRGSKAILNFPLE 365 YRGVR+RPWG++AAEIRDP ++ RVWLGTFD+ LRG KA NFP++ Sbjct: 27 YRGVRKRPWGRFAAEIRDPLKKS-RVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFPID 85
BLAST of CX296301 vs. ExPASy Swiss-Prot
Match: ERF79_ARATH (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana GN=ERF8 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.785e-11 Identity = 34/78 (43.59%), Postives = 45/78 (57.69%), Query Frame = 3 Query: 186 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXXFQLRGSKAILNFPLEAGKCDSNAAVARECDSSA 419 YRGVR+RPWG+YAAEIRDP ++ RVWLGTFDT RG KA NF + G + ++ + ++A Sbjct: 31 YRGVRKRPWGRYAAEIRDPVKK-TRVWLGTFDTAQQAARAYDAAARDFRGVKAKTNFGVIVGSSPTQSSTVVDSPTAA 107 The following BLAST results are available for this feature:
BLAST of CX296301 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296301 ID=CX296301; Name=CX296301; organism=Citrus clementina; type=EST; length=628bpback to top |