CX296307

Overview
NameCX296307
Unique NameCX296307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF037 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.523e-18
Identity = 53/127 (41.73%), Postives = 70/127 (55.12%), Query Frame = 2
Query:  152 KPAERSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFA------NSEPLRSQSPEQSVSELQTEYLSPSISEAT 514
            K   RSD  Y+GVR R WGK+VSEIR P  ++RIWLG++ T E AARA DAA   ++G SA  NFP+    +    S  P ++QA AA  A      +S  L    P   ++  +T+  S S S  T
Sbjct:   34 KKRVRSDPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCT 160          
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: RA210_ARATH (Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana GN=RAP2-10 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.295e-18
Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 2
Query:  164 RSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPD 352
            + D  YKG+R RKWGK+V+EIR PN R+RIWLGSY T E AARA+D A+F LRG SA+ NFP+
Sbjct:   25 KRDKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRGPSARLNFPE 87          
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: ERF62_ARATH (Ethylene-responsive transcription factor ERF062 OS=Arabidopsis thaliana GN=ERF062 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.587e-18
Identity = 49/112 (43.75%), Postives = 71/112 (63.39%), Query Frame = 2
Query:  179 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGG------RSLKPSEIQAV-AAQFANS---EPLRSQSPEQSVSELQTE 484
            Y+GVR+R WGK+V+EIRLP +R R+WLG+++TAE+AA A+D A + LRG  A  NFPD    +  G       SL  S+IQ + ++Q +NS    P +  +PEQ    ++ E
Sbjct:  232 YRGVRQRHWGKWVAEIRLPRNRTRVWLGTFETAEQAAMAYDTAAYILRGEFAHLNFPDLKHQLKSGSLRCMIASLLESKIQQISSSQVSNSPSPPPPKVGTPEQKNHHMKME 343          
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: ERF10_ARATH (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana GN=ERF010 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.587e-18
Identity = 42/76 (55.26%), Postives = 53/76 (69.74%), Query Frame = 2
Query:  134 VKHVVEKPAERSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPP 361
            V  V      + D  YKG+R RKWGK+V+EIR PN R+R+WLGSY T E AARA+D A+F LRG +A+ NFP+  P
Sbjct:    6 VADVAVPGTRKRDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARLNFPELLP 81          
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.252e-17
Identity = 53/131 (40.46%), Postives = 74/131 (56.49%), Query Frame = 2
Query:  149 EKPAERSDSR--YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVSELQTEYLSPSISEATVQLDSDG 535
            +KP + S     Y+GVRKR WGK+VSEIR P  ++RIWLG++ + E AARA D A   ++G SA  NFPD         SL P +IQ  A + A+ E  +S S   S++   ++  S S  E+ V   + G
Sbjct:   24 KKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQ--SSSSLESLVSSSATG 152          
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: ERF22_ARATH (Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana GN=ERF022 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.252e-17
Identity = 59/151 (39.07%), Postives = 73/151 (48.34%), Query Frame = 2
Query:  179 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFA-NSEPLRSQSPE-QSVSELQTEYLSPSISEATVQLDSDGVFDGXXXXXXXXXXXXNYPSEYGIFPGFDD 625
            Y+G+R+RKWGK+VSEIR P  + RIWLGSY+TAE AA A+DAA   LRGR    NFP+         S     IQA A   A   +P R   P  +S   L    LSP      +Q  ++   D             +Y   YG F G  D
Sbjct:   20 YRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPELVDSFPRPESSSSEHIQAAAQDAALMFKPGRLSEPALESGQGLSRVGLSPD----QIQAINESPLDSPRMGWMQDLEVADYEELYGQFFGQHD 166          
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: ERF08_ARATH (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana GN=ERF008 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.136e-17
Identity = 40/58 (68.97%), Postives = 48/58 (82.76%), Query Frame = 2
Query:  179 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPD 352
            YKG+R RKWGK+V+EIR PN R+RIWLGSY T E AARA+D A+F LRG SA+ NFP+
Sbjct:   28 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARLNFPE 85          
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: ERF58_ARATH (Ethylene-responsive transcription factor ERF058 OS=Arabidopsis thaliana GN=ERF058 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.214e-17
Identity = 50/149 (33.56%), Postives = 85/149 (57.05%), Query Frame = 2
Query:   68 VNSIQHHSSKSRIPIT*NPLKMVKHVVEKPAERSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPD--NPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVSELQTEYLSPSISE 508
            ++S  HH S   +      +K       KP +     Y+GVR+R WGK+V+EIRLP +R R+WLG++DTAE+AA A+D A + LRG  A+ NFPD  +  +    +S   ++++A+    A +   + +S ++S S  ++  ++  + E
Sbjct:   55 LHSFSHHLSPKPVS-----MKQTGTSAAKPTKL----YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPDLRHNDEYQPLQSSVDAKLEAICQNLAETTQKQVRSTKKSSSRKRSSTVAVKLPE 194          
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: ERF39_ARATH (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF039 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.214e-17
Identity = 50/134 (37.31%), Postives = 72/134 (53.73%), Query Frame = 2
Query:   71 NSIQHHSSKS-RIPIT*NPLKMVKHVVEKPAERSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVS 469
            +S  H S ++ R P+     K  K   E+        ++GVR R+WGK+VSEIR P  ++RIWLG++ T E AARA D A   ++G SA  NFP+    +    S  P +IQ  AA  A  +    +SP  +V+
Sbjct:    3 DSSSHESQRNLRSPVPEKTGKSSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAAAAVDWKAPESPSSTVT 136          
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: ERF21_ARATH (Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana GN=ERF021 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.214e-17
Identity = 46/109 (42.20%), Postives = 67/109 (61.47%), Query Frame = 2
Query:  173 SRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVSELQTEYLSPS 499
            S Y+GVRKRKWGK+VSEIR P ++ RIWLGS++T E AA A+D A F  RGR A+ NFP+    +      +P++  + + + A  E    ++ E + S +Q +  S S
Sbjct:   22 SAYRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLNFPELASSLP-----RPADSSSDSIRMAVHEATLCRTTEGTESAMQVDSSSSS 125          
The following BLAST results are available for this feature:
BLAST of CX296307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
ERF37_ARATH2.523e-1841.73Ethylene-responsive transcription factor ERF037 OS... [more]
RA210_ARATH3.295e-1865.08Ethylene-responsive transcription factor RAP2-10 O... [more]
ERF62_ARATH9.587e-1843.75Ethylene-responsive transcription factor ERF062 OS... [more]
ERF10_ARATH9.587e-1855.26Ethylene-responsive transcription factor ERF010 OS... [more]
TINY_ARATH1.252e-1740.46Ethylene-responsive transcription factor TINY OS=A... [more]
ERF22_ARATH1.252e-1739.07Ethylene-responsive transcription factor ERF022 OS... [more]
ERF08_ARATH2.136e-1768.97Ethylene-responsive transcription factor ERF008 OS... [more]
ERF58_ARATH6.214e-1733.56Ethylene-responsive transcription factor ERF058 OS... [more]
ERF39_ARATH6.214e-1737.31Ethylene-responsive transcription factor ERF039 OS... [more]
ERF21_ARATH6.214e-1742.20Ethylene-responsive transcription factor ERF021 OS... [more]

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Properties
Property NameValue
Genbank descriptionC05138F04SK FerrChloL1 Citrus clementina cDNA clone C05138F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296307 ID=CX296307; Name=CX296307; organism=Citrus clementina; type=EST; length=716bp
CCGAATTCGGCACGAGGGCAAACAGGAATACAAGAATCATCATCCAAATC
ACACTCAAAAGTTCCGAGTCAACTCGATACAGCACCACTCGTCTAAATCA
AGAATACCCATAACCTGAAACCCTTTAAAAATGGTGAAGCACGTAGTCGA
AAAGCCTGCTGAGAGAAGTGACTCTCGTTACAAGGGTGTCCGAAAGCGAA
AGTGGGGGAAATATGTGTCTGAAATCAGACTACCCAACAGCCGTGCCCGT
ATCTGGCTGGGCTCCTACGACACAGCAGAAAAAGCAGCGCGTGCTTTCGA
CGCTGCTTTGTTTTGCTTACGTGGCCGATCAGCCAAGTTTAATTTCCCGG
ACAACCCACCCGACATATCAGGCGGGCGCTCACTTAAGCCATCTGAGATT
CAAGCTGTGGCGGCTCAGTTCGCGAATTCGGAGCCGCTGAGGAGTCAATC
GCCAGAACAGTCGGTGTCCGAATTGCAAACGGAGTACTTATCGCCGTCGA
TTTCTGAGGCTACGGTTCAGTTGGACAGCGATGGGGTTTTTGACGGGTCT
TTATTGGATCTTTTAACGGCATCGAGTTCCAGTAACTACCCTTCCGAATA
TGGGATATTTCCTGGGTTTGATGACCTGTCTAATGACATTTTTGCTCCGC
AACTCCCAGCTGTTGATTTTGCAGACGAGAATTTTGATGGGCTATTGTTG
AAATCAGATTCGTTTC
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