CX296307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: ERF20_ARATH (Ethylene-responsive transcription factor ERF020 OS=Arabidopsis thaliana GN=ERF020 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.611e-15 Identity = 43/89 (48.31%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 161 ERSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSA----KFNFPDNPPDISGGRSLKPSEIQAVAA 415 E S+YKG+R+RKWGK+VSEIR+P +R R+WLGS+ TAE AA A D A +CL S+ FNFP + S ++ P IQ A+ Sbjct: 8 ETDQSKYKGIRRRKWGKWVSEIRVPGTRQRLWLGSFSTAEGAAVAHDVAFYCLHRPSSLDDESFNFP-HLLTTSLASNISPKSIQKAAS 95
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: DRE1B_ARATH (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana GN=DREB1B PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.611e-15 Identity = 47/98 (47.96%), Postives = 59/98 (60.20%), Query Frame = 2 Query: 149 EKPAERSDSR------YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFA 424 +KPA R R Y+GVR+R GK+VSE+R PN + RIWLG++ TAE AARA D A LRGRSA NF D+ + S +IQ AA+ A Sbjct: 32 KKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAA 129
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: DRE1C_ARATH (Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana GN=DREB1C PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 48/105 (45.71%), Postives = 60/105 (57.14%), Query Frame = 2 Query: 128 KMVKHVVEKPAERSDSR------YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFA 424 K+ +KPA R R Y+GVR+R GK+V E+R PN + RIWLG++ TAE AARA D A LRGRSA NF D+ + S EIQ AA+ A Sbjct: 28 KLATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCELREPNKKTRIWLGTFQTAEMAARAHDVAAIALRGRSACLNFADSAWRLRIPESTCAKEIQKAAAEAA 132
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: ERF53_ARATH (Ethylene-responsive transcription factor ERF053 OS=Arabidopsis thaliana GN=ERF053 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.816e-15 Identity = 34/58 (58.62%), Postives = 47/58 (81.03%), Query Frame = 2 Query: 179 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPD 352 Y+GVR+R WGK+V+EIR P +R R+WLG++DTAE+AA A+D F LRG +A+ NFP+ Sbjct: 187 YRGVRQRHWGKWVAEIRKPRNRTRLWLGTFDTAEEAAMAYDREAFKLRGETARLNFPE 244
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15 Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 2 Query: 83 HHSSKSRIPIT*NPLKMVKHVVEKPAERSDS-----RYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDN 355 H + + PL + V K E S S +Y+GVR+R WGK+ +EIR P+ R+WLG+++TAE AARA+DAA RG AK NFP+N Sbjct: 25 HKREREEFSLPPQPL-ITGSAVTKECESSMSLERPKKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPEN 119
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: ERF36_ARATH (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF036 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15 Identity = 40/82 (48.78%), Postives = 51/82 (62.20%), Query Frame = 2 Query: 179 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFA 424 Y+GVR R WGK+VSEIR P + RIWLG++ TA+ AARA D A ++G SA NFP+ S P +IQ AA+ A Sbjct: 79 YRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPASSSPHDIQTAAAEAA 160
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15 Identity = 38/64 (59.38%), Postives = 46/64 (71.88%), Query Frame = 2 Query: 161 ERSDSRYKGVRKRKWGKYVSEIRLPNSRA-RIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFP 349 E + Y+GVR+R WGKY +EIR PN + RIWLG+YDTA +A RA+D A F LRGR A NFP Sbjct: 82 EEEERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFP 145
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: DRE1A_ARATH (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana GN=DREB1A PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15 Identity = 46/98 (46.94%), Postives = 58/98 (59.18%), Query Frame = 2 Query: 149 EKPAERSDSR------YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFA 424 +KPA R R Y+GVR+R GK+V E+R PN + RIWLG++ TAE AARA D A LRGRSA NF D+ + S +IQ AA+ A Sbjct: 35 KKPAGRKKFRETRHPIYRGVRRRNSGKWVCEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAA 132
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15 Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 2 Query: 176 RYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFP 349 RY+GVRKR WG+Y +EIR P + R+WLG++DTAE+AARA+D A RG AK NFP Sbjct: 24 RYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFP 81
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15 Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 2 Query: 161 ERSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAV 409 ++ SRYKG+R+R WG++ +EIR P R+WLG+++TAE+AARA+D +RG AK NFP+ + SG R K +Q V Sbjct: 19 KKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFPN---ESSGKRKAKAKTVQQV 98 The following BLAST results are available for this feature:
BLAST of CX296307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 126
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296307 ID=CX296307; Name=CX296307; organism=Citrus clementina; type=EST; length=716bpback to top |