CX296307

Overview
NameCX296307
Unique NameCX296307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: ERF19_ARATH (Ethylene-responsive transcription factor ERF019 OS=Arabidopsis thaliana GN=ERF019 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.921e-15
Identity = 44/87 (50.57%), Postives = 55/87 (63.22%), Query Frame = 2
Query:  167 SDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSA--KFNFPD--NPPDISGGRSLKPSEIQAVAA 415
            S S+YKG+R+RKWGK+VSEIR+P +R R+WLGS+ TAE AA A D A FCL    +    NFP   NP  +S      P  IQ  A+
Sbjct:   10 SQSKYKGIRRRKWGKWVSEIRVPGTRDRLWLGSFSTAEGAAVAHDVAFFCLHQPDSLESLNFPHLLNPSLVS---RTSPRSIQQAAS 93          
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: DRE2A_ORYSJ (Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. japonica GN=DREB2A PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14
Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 2
Query:  161 ERSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPS 394
            E S+  Y+GVR+R WGK+V+EIR PN   R+WLGS+ TA +AA A+D A   + G +A+ NF DN  D + G +  PS
Sbjct:   70 ENSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTALEAAHAYDEAARAMYGPTARVNFADNSTDANSGCTSAPS 147          
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: DRE2A_ORYSI (Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. indica GN=DREB2A PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14
Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 2
Query:  161 ERSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPS 394
            E S+  Y+GVR+R WGK+V+EIR PN   R+WLGS+ TA +AA A+D A   + G +A+ NF DN  D + G +  PS
Sbjct:   70 ENSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTALEAAHAYDEAARAMYGPTARVNFADNSTDANSGCTSAPS 147          
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14
Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 2
Query:  176 RYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDN 355
            RY+GVR+R WGK+ +EIR P   AR+WLG++D AE AARA+D A    RG  AK NFP+N
Sbjct:  184 RYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFPEN 243          
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14
Identity = 37/72 (51.39%), Postives = 48/72 (66.67%), Query Frame = 2
Query:  134 VKHVVEKPAERSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFP 349
            VK    K  E +  RY+GVRKR WG+Y +EIR P  ++R+WLG++DT E+AARA+D      RG  AK NFP
Sbjct:    5 VKTAAVKTNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFP 76          
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: DRE1D_ARATH (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana GN=DREB1D PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.887e-14
Identity = 40/82 (48.78%), Postives = 53/82 (64.63%), Query Frame = 2
Query:  179 YKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVAAQFA 424
            Y+GVR+R  GK+V E+R PN ++RIWLG++ T E AARA D A   LRGRSA  NF D+   +    +  P EIQ  A++ A
Sbjct:   54 YRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPETTCPKEIQKAASEAA 135          
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 2
Query:  164 RSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFP 349
            R +  ++GVRKR WG+Y +EIR P  + R+WLG++DTAE+AARA+D A    RG  AK NFP
Sbjct:   28 RKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFP 89          
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 41/92 (44.57%), Postives = 53/92 (57.61%), Query Frame = 2
Query:   83 HHSSKSRIPIT*NPLKMVKHVVEKPA--ERSDSRYKGVRKRKWGKYVSEIRLPNSRA-RIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFP 349
            HH + S +     PL  +      P   E     Y+GVR+R WGKY +EIR PN +  R+WLG++DTA +AAR +D A F LRG  A  NFP
Sbjct:   38 HHCTTSTLSQRKPPLATIAVPTTAPVVQENDQRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFP 129          
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 40/73 (54.79%), Postives = 51/73 (69.86%), Query Frame = 2
Query:  137 KHVVEKP-AERSDSRYKGVRKRKWGKYVSEIRLPNSR-ARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFP 349
            K  V KP +E     Y+GVR+R WGK+ +EIR PN R +R+WLG++DTA +AARA+D A F LRG  A  NFP
Sbjct:  141 KPEVTKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFP 213          
BLAST of CX296307 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 51/140 (36.43%), Postives = 79/140 (56.43%), Query Frame = 2
Query:  128 KMVKHVVEKPA--ERSDSRYKGVRKRKWGKYVSEIRLPNSRARIWLGSYDTAEKAARAFDAALFCLRGRSAKFNFPDNPPDISGGRSLKPSEIQAVA-AQFANSEPLRS-----QSPEQSVS-ELQTEYLSPSISEATVQ 520
            K  K VV  P     +  +++GVR+R WGK+ +EIR P+ R R+WLG++DTAE+AA  +D A   LRG +A+ NFP  PP ++       +E++ V+       E LRS     +SP    S  ++ E++  S +E  V+
Sbjct:   68 KRKKRVVTVPVVVTTATRKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFP--PPPVTENVEEASTEVKGVSDFIIGGGECLRSPVSVLESPFSGESTAVKEEFVGVSTAEIVVK 205          
The following BLAST results are available for this feature:
BLAST of CX296307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
ERF19_ARATH9.921e-1550.57Ethylene-responsive transcription factor ERF019 OS... [more]
DRE2A_ORYSJ1.296e-1448.72Dehydration-responsive element-binding protein 2A ... [more]
DRE2A_ORYSI1.296e-1448.72Dehydration-responsive element-binding protein 2A ... [more]
ABR1_ARATH1.296e-1458.33Ethylene-responsive transcription factor ABR1 OS=A... [more]
ERF76_ARATH2.210e-1451.39Ethylene-responsive transcription factor 11 OS=Ara... [more]
DRE1D_ARATH2.887e-1448.78Dehydration-responsive element-binding protein 1D ... [more]
ERF80_ARATH3.770e-1454.84Ethylene-responsive transcription factor 9 OS=Arab... [more]
EF105_ARATH3.770e-1444.57Ethylene-responsive transcription factor ERF105 OS... [more]
EF102_ARATH3.770e-1454.79Ethylene-responsive transcription factor 5 OS=Arab... [more]
CRF1_ARATH3.770e-1436.43Ethylene-responsive transcription factor CRF1 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC05138F04SK FerrChloL1 Citrus clementina cDNA clone C05138F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296307 ID=CX296307; Name=CX296307; organism=Citrus clementina; type=EST; length=716bp
CCGAATTCGGCACGAGGGCAAACAGGAATACAAGAATCATCATCCAAATC
ACACTCAAAAGTTCCGAGTCAACTCGATACAGCACCACTCGTCTAAATCA
AGAATACCCATAACCTGAAACCCTTTAAAAATGGTGAAGCACGTAGTCGA
AAAGCCTGCTGAGAGAAGTGACTCTCGTTACAAGGGTGTCCGAAAGCGAA
AGTGGGGGAAATATGTGTCTGAAATCAGACTACCCAACAGCCGTGCCCGT
ATCTGGCTGGGCTCCTACGACACAGCAGAAAAAGCAGCGCGTGCTTTCGA
CGCTGCTTTGTTTTGCTTACGTGGCCGATCAGCCAAGTTTAATTTCCCGG
ACAACCCACCCGACATATCAGGCGGGCGCTCACTTAAGCCATCTGAGATT
CAAGCTGTGGCGGCTCAGTTCGCGAATTCGGAGCCGCTGAGGAGTCAATC
GCCAGAACAGTCGGTGTCCGAATTGCAAACGGAGTACTTATCGCCGTCGA
TTTCTGAGGCTACGGTTCAGTTGGACAGCGATGGGGTTTTTGACGGGTCT
TTATTGGATCTTTTAACGGCATCGAGTTCCAGTAACTACCCTTCCGAATA
TGGGATATTTCCTGGGTTTGATGACCTGTCTAATGACATTTTTGCTCCGC
AACTCCCAGCTGTTGATTTTGCAGACGAGAATTTTGATGGGCTATTGTTG
AAATCAGATTCGTTTC
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