CX296313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296313 vs. ExPASy Swiss-Prot
Match: WRKY2_ARATH (Probable WRKY transcription factor 2 OS=Arabidopsis thaliana GN=WRKY2 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.539e-17 Identity = 46/88 (52.27%), Postives = 55/88 (62.50%), Query Frame = 3 Query: 264 SRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAVHDAPAA 527 +R R RV ++ DI D Y WRKYGQK +KG+P+PR YYKC++ GC RKHVERA D +I TYEG HN HD PAA Sbjct: 467 TRAIREPRVVVQTTSDVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTA-PGCTVRKHVERASHDLKSVITTYEGKHN-----HDVPAA 548
BLAST of CX296313 vs. ExPASy Swiss-Prot
Match: WRK29_ARATH (Probable WRKY transcription factor 29 OS=Arabidopsis thaliana GN=WRKY29 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.010e-17 Identity = 42/83 (50.60%), Postives = 55/83 (66.27%), Query Frame = 3 Query: 249 SKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNH 497 SK +KS+ + RV K ++ D ++WRKYGQKPIKGSP+PR YY+CSS +GC ARK VER +P +TY +HNH Sbjct: 110 SKSKKSKKNQQKRVVE-QVKEENLLSDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERNPQNPEKFTITYTNEHNH 191
BLAST of CX296313 vs. ExPASy Swiss-Prot
Match: WRK26_ARATH (Probable WRKY transcription factor 26 OS=Arabidopsis thaliana GN=WRKY26 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 2.010e-17 Identity = 43/81 (53.09%), Postives = 52/81 (64.20%), Query Frame = 3 Query: 255 KRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNH 497 KR+ +K RV ++ DI D Y WRKYGQK +KG+P+PR YYKC + GC RKHVERA DP +I TYEG H H Sbjct: 212 KREENVKE-PRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKC-TFTGCFVRKHVERAFQDPKSVITTYEGKHKH 290
BLAST of CX296313 vs. ExPASy Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.625e-17 Identity = 39/85 (45.88%), Postives = 54/85 (63.53%), Query Frame = 3 Query: 249 SKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAF 503 +KK+ + R R ++ D D Y WRKYGQK +K SP+PR YY+C++V GC +K VER+ DDP +++ TYEG H H F Sbjct: 196 AKKKNQKKAREARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPYPRSYYRCTTV-GCGVKKRVERSSDDPSIVMTTYEGQHTHPF 279
BLAST of CX296313 vs. ExPASy Swiss-Prot
Match: WRK32_ARATH (Probable WRKY transcription factor 32 OS=Arabidopsis thaliana GN=WRKY32 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.625e-17 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 3 Query: 327 DDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAV----HDAPAAM 530 D Y WRKYGQK +KG+PHPR YY+C+S GCP RKH+E A+++ +I+TY+G HNH V H P++M Sbjct: 332 DGYRWRKYGQKMVKGNPHPRNYYRCTSA-GCPVRKHIETAVENTKAVIITYKGVHNHDMPVPKKRHGPPSSM 402
BLAST of CX296313 vs. ExPASy Swiss-Prot
Match: WRKY3_ARATH (Probable WRKY transcription factor 3 OS=Arabidopsis thaliana GN=WRKY3 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.477e-17 Identity = 41/81 (50.62%), Postives = 52/81 (64.20%), Query Frame = 3 Query: 285 RVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAVHDAPAA 527 R+ ++ D+ D Y WRKYGQK +KG+P+PR YYKC++ C RKHVERA DP ++ TYEG HN HD PAA Sbjct: 402 RIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTT-PDCGVRKHVERAATDPKAVVTTYEGKHN-----HDVPAA 476 HSP 2 Score: 73.559 bits (179), Expect = 6.691e-13 Identity = 36/63 (57.14%), Postives = 44/63 (69.84%), Query Frame = 3 Query: 312 ADIPPDD-YSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNH 497 AD P DD Y+WRKYGQK +KGS PR YYKC+ CP +K VER+LD + I+ Y+G HNH Sbjct: 245 ADKPADDGYNWRKYGQKQVKGSDFPRSYYKCTH-PACPVKKKVERSLDGQVTEII-YKGQHNH 305
BLAST of CX296313 vs. ExPASy Swiss-Prot
Match: WRK58_ARATH (Probable WRKY transcription factor 58 OS=Arabidopsis thaliana GN=WRKY58 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 7.637e-17 Identity = 41/71 (57.75%), Postives = 47/71 (66.20%), Query Frame = 3 Query: 315 DIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAVHDAPAA 527 D+ D Y WRKYGQK +KG+PHPR YYKC++ C RKHVERA D +I TYEG HN HD PAA Sbjct: 303 DLLDDGYRWRKYGQKVVKGNPHPRSYYKCTT-PNCTVRKHVERASTDAKAVITTYEGKHN-----HDVPAA 367 HSP 2 Score: 73.1738 bits (178), Expect = 8.738e-13 Identity = 35/62 (56.45%), Postives = 44/62 (70.97%), Query Frame = 3 Query: 315 DIPPDD-YSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNH 497 D P DD Y+WRKYGQKPIKG +PR YYKC+ V CP +K VER+ D + I+ Y+G H+H Sbjct: 163 DKPADDGYNWRKYGQKPIKGCEYPRSYYKCTHV-NCPVKKKVERSSDGQITQII-YKGQHDH 222
BLAST of CX296313 vs. ExPASy Swiss-Prot
Match: WRK71_ARATH (Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.701e-16 Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = 3 Query: 252 KKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNH 497 KK+ + +R RV ++ D D Y WRKYGQK +K SP+PR YY+C++ + C +K VER+ DP ++I TYEG HNH Sbjct: 112 KKKGEKKEREVRVAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQK-CNVKKRVERSFQDPSIVITTYEGKHNH 192
BLAST of CX296313 vs. ExPASy Swiss-Prot
Match: WRK28_ARATH (Probable WRKY transcription factor 28 OS=Arabidopsis thaliana GN=WRKY28 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.701e-16 Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 3 Query: 249 SKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNH 497 +KK + + +R RV ++ D D Y WRKYGQK +K SP+PR YY+C++ + C +K VER+ DP ++I TYEG HNH Sbjct: 147 TKKTEVKKQREPRVSFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQK-CNVKKRVERSFQDPTVVITTYEGQHNH 228
BLAST of CX296313 vs. ExPASy Swiss-Prot
Match: WRK44_ARATH (WRKY transcription factor 44 OS=Arabidopsis thaliana GN=WRKY44 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 3.790e-16 Identity = 41/83 (49.40%), Postives = 52/83 (62.65%), Query Frame = 3 Query: 249 SKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNH 497 SK+RK+ + + S +D D + WRKYGQK + G+ +PR YY+C+S C ARKHVERA DDP I TYEG HNH Sbjct: 324 SKRRKNEKQSSEAGVSQGSVESDSLEDGFRWRKYGQKVVGGNAYPRSYYRCTSAN-CRARKHVERASDDPRAFITTYEGKHNH 405 HSP 2 Score: 69.707 bits (169), Expect = 9.661e-12 Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 3 Query: 327 DDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHA 500 D Y+WRKYGQK +KGS PR YYKC+ + CP +K VER+++ + IV Y+G+HNH+ Sbjct: 166 DGYNWRKYGQKQVKGSECPRSYYKCTHPK-CPVKKKVERSVEGQVSEIV-YQGEHNHS 221 The following BLAST results are available for this feature:
BLAST of CX296313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296313 ID=CX296313; Name=CX296313; organism=Citrus clementina; type=EST; length=531bpback to top |