CX296313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296313 vs. ExPASy Swiss-Prot
Match: WRK42_ARATH (Probable WRKY transcription factor 42 OS=Arabidopsis thaliana GN=WRKY42 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.465e-16 Identity = 41/85 (48.24%), Postives = 50/85 (58.82%), Query Frame = 3 Query: 276 RVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAVHDAPAAM 530 R RV + A + D WRKYGQK KG+P PR YY+C+ GCP RK V+R +D +LI TYEG+HNH PAAM Sbjct: 276 RKARVSVRARSEAPMLSDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGNHNHPL----PPAAM 356
BLAST of CX296313 vs. ExPASy Swiss-Prot
Match: WRKY8_ARATH (Probable WRKY transcription factor 8 OS=Arabidopsis thaliana GN=WRKY8 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 8.444e-16 Identity = 37/81 (45.68%), Postives = 51/81 (62.96%), Query Frame = 3 Query: 255 KRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNH 497 K+K K+ RV ++ D D Y WRKYGQK +K SP+PR YY+C++ + C +K VER+ DP ++I TYE HNH Sbjct: 160 KKKEEKKKEPRVSFMTKTEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQK-CNVKKRVERSYQDPTVVITTYESQHNH 239
BLAST of CX296313 vs. ExPASy Swiss-Prot
Match: WRKY6_ARATH (WRKY transcription factor 6 OS=Arabidopsis thaliana GN=WRKY6 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 8.444e-16 Identity = 37/74 (50.00%), Postives = 46/74 (62.16%), Query Frame = 3 Query: 276 RVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNH 497 R RV + A + D WRKYGQK KG+P PR YY+C+ GCP RK V+R +D +LI TYEG+HNH Sbjct: 296 RKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMATGCPVRKQVQRCAEDRSILITTYEGNHNH 369
BLAST of CX296313 vs. ExPASy Swiss-Prot
Match: WRKY9_ARATH (Probable WRKY transcription factor 9 OS=Arabidopsis thaliana GN=WRKY9 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.440e-15 Identity = 35/61 (57.38%), Postives = 41/61 (67.21%), Query Frame = 3 Query: 327 DDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAV 509 D WRKYGQK KG+P PR YY+C+ GCP RK V+R L+D +LI TYEG HNH V Sbjct: 236 DGCQWRKYGQKTAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPV 296
BLAST of CX296313 vs. ExPASy Swiss-Prot
Match: WRK34_ARATH (Probable WRKY transcription factor 34 OS=Arabidopsis thaliana GN=WRKY34 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.440e-15 Identity = 39/78 (50.00%), Postives = 49/78 (62.82%), Query Frame = 3 Query: 264 SRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNH 497 +R R RV ++ DI D Y WRKYGQK +KG+P+PR YYKC++ GC KHVERA DD ++ TY G H H Sbjct: 352 TRASREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTA-NGCTVTKHVERASDDFKSVLTTYIGKHTH 428
BLAST of CX296313 vs. ExPASy Swiss-Prot
Match: WRK31_ARATH (Probable WRKY transcription factor 31 OS=Arabidopsis thaliana GN=WRKY31 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.440e-15 Identity = 37/74 (50.00%), Postives = 46/74 (62.16%), Query Frame = 3 Query: 276 RVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNH 497 R RV + A + D WRKYGQK KG+P PR YY+C+ GCP RK V+R +D +LI TYEG+HNH Sbjct: 281 RKARVSVRARSEAAMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAGGCPVRKQVQRCAEDRSILITTYEGNHNH 354
BLAST of CX296313 vs. ExPASy Swiss-Prot
Match: WRK13_ARATH (Probable WRKY transcription factor 13 OS=Arabidopsis thaliana GN=WRKY13 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.440e-15 Identity = 42/99 (42.42%), Postives = 56/99 (56.57%), Query Frame = 3 Query: 225 SSSGRCHCSKKRKSRIKRVTRVPAISSKM---ADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAVH 512 +S G K +K + +R R P K D+ D Y WRKYGQK +K + HPR YY+C+ + C +K VER DDP M+I TYEG H H+ + H Sbjct: 187 ASLGVVSSLKMKKLKTRRKVREPRFCFKTLSEVDVLDDGYRWRKYGQKVVKNTQHPRSYYRCTQDK-CRVKKRVERLADDPRMVITTYEGRHLHSPSNH 284
BLAST of CX296313 vs. ExPASy Swiss-Prot
Match: WRK68_ARATH (Probable WRKY transcription factor 68 OS=Arabidopsis thaliana GN=WRKY68 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.457e-15 Identity = 38/80 (47.50%), Postives = 48/80 (60.00%), Query Frame = 3 Query: 258 RKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNH 497 RK K+V +V I+ D Y WRKYGQKP+K SP PR YY+C++ C +K VER+ DP +I TYEG H H Sbjct: 96 RKQTKKKVPKVSFITRSEVLHLDDGYKWRKYGQKPVKDSPFPRNYYRCTTT-WCDVKKRVERSFSDPSSVITTYEGQHTH 174
BLAST of CX296313 vs. ExPASy Swiss-Prot
Match: WRK23_ARATH (Probable WRKY transcription factor 23 OS=Arabidopsis thaliana GN=WRKY23 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.457e-15 Identity = 37/91 (40.66%), Postives = 51/91 (56.04%), Query Frame = 3 Query: 249 SKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAVHDAP 521 +KK + +R RV ++ D D Y WRKYGQK +K SP PR YY+C++ C +K VER+ DP ++ TYEG H H + P Sbjct: 149 AKKNNQKRQREARVAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTA-SCNVKKRVERSFRDPSTVVTTYEGQHTHISPLTSRP 238
BLAST of CX296313 vs. ExPASy Swiss-Prot
Match: WRK57_ARATH (Probable WRKY transcription factor 57 OS=Arabidopsis thaliana GN=WRKY57 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.191e-15 Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 3 Query: 252 KKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNH 497 KK + RI++ R ++ D D Y WRKYGQK +K SP PR YY+C++ R C +K VER+ DDP ++I TYEG H H Sbjct: 124 KKAQKRIRQ-PRFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSR-CTVKKRVERSSDDPSIVITTYEGQHCH 203 The following BLAST results are available for this feature:
BLAST of CX296313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296313 ID=CX296313; Name=CX296313; organism=Citrus clementina; type=EST; length=531bpback to top |