CX296315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_NOSP7 (50S ribosomal protein L5 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rplE PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.600e-49 Identity = 89/144 (61.81%), Postives = 117/144 (81.25%), Query Frame = 3 Query: 186 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 T RLK+ Y E IVP L +F YTN+HQVPK+ K+ +N G+G+AAQNAK LEA++N++AL+TGQ+PV TRA+ +IA FKIR+G P+GI VTLR MY+F DRL++L LPR RDF+GV+P SFDG GNY++GV+EQ +FPE+ YD Sbjct: 3 TTRLKSLYQETIVPKLINQFQYTNVHQVPKLVKVTINRGLGEAAQNAKSLEASINEIALVTGQKPVVTRAKKAIAGFKIRQGMPVGIMVTLRAERMYAFFDRLVSLSLPRIRDFRGVSPKSFDGRGNYTLGVREQLIFPEVEYD 146
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_ACAM1 (50S ribosomal protein L5 OS=Acaryochloris marina (strain MBIC 11017) GN=rplE PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 4.656e-49 Identity = 88/144 (61.11%), Postives = 117/144 (81.25%), Query Frame = 3 Query: 186 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 T RLKT YL+ VP L+E+F Y N H++PK+ K+ VN G+G+A+QNAK LE ++ +LA+ITGQRPV TRA+ +IA FKIR+G P+G+ VTLRG MY+FLDRL+NL LPR RDF+GV+P SFDG GNY++G++EQ +FPE+ YD Sbjct: 2 TVRLKTLYLDTAVPKLQEQFKYKNAHEIPKVTKVSVNRGLGEASQNAKALERSLEELAVITGQRPVVTRAKKAIAGFKIRQGMPVGVMVTLRGERMYAFLDRLVNLALPRIRDFRGVSPKSFDGRGNYTLGLREQLIFPEVDYD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RK5_MESVI (50S ribosomal protein L5, chloroplastic OS=Mesostigma viride GN=rpl5 PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 6.082e-49 Identity = 91/142 (64.08%), Postives = 116/142 (81.69%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLKT YLE V L+E F Y N HQ+P+I+KIV+NCG+ +A+QN+K LE+AM +L++I GQ+ V TRA+ +IA FKIREG P+GI +TLRG+ MY+FLDRLINL LPR RDFQGV+ SFDGHGNY++G+KEQ +FPEI YD Sbjct: 4 RLKTLYLESAVLKLQETFGYKNPHQIPRIKKIVINCGLSEASQNSKSLESAMKELSIIAGQKGVITRAKKAIAGFKIREGLPIGICITLRGDSMYAFLDRLINLALPRIRDFQGVSSKSFDGHGNYNLGLKEQLMFPEIDYD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_THEEB (50S ribosomal protein L5 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplE PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.037e-48 Identity = 90/142 (63.38%), Postives = 114/142 (80.28%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK Y + +VP L ++F Y NIHQVPKI K+ VN G+G+AAQNAK LEA + ++A ITGQ+PV TRA+ +IA FKIR+G P+G+AVTLR MY+FLDRLINL LPR RDF+GVNP SFDG GNY++G++EQ +FPE+ YD Sbjct: 4 RLKDHYNKTVVPQLMQQFQYKNIHQVPKIVKVTVNRGLGEAAQNAKALEATLAEIATITGQKPVVTRAKKAIAGFKIRKGMPVGVAVTLRSERMYAFLDRLINLALPRIRDFRGVNPKSFDGRGNYTLGLREQLIFPEVNYD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RK5_ZYGCR (50S ribosomal protein L5, chloroplastic OS=Zygnema circumcarinatum GN=rpl5 PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.355e-48 Identity = 89/144 (61.81%), Postives = 115/144 (79.86%), Query Frame = 3 Query: 186 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 T RLKT YL +VP LR++ Y NIHQVP++ KIV+NCG+G+A+QNAK LE+ + DL+ ITGQ+P+ TRA+ SIA F+IR +G+ VTLR + MY+FLDRLI+L LPR RDFQG+N NSFDGHGN+ +G+KEQ +FPEI YD Sbjct: 2 TQRLKTFYLNTVVPKLRKQLEYQNIHQVPQVTKIVINCGLGEASQNAKSLESTLRDLSFITGQKPIVTRAKKSIAGFQIRAQMSVGVCVTLRADAMYAFLDRLIHLALPRIRDFQGLNSNSFDGHGNFHLGLKEQLMFPEIDYD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_THEPX (50S ribosomal protein L5 OS=Thermoanaerobacter sp. (strain X514) GN=rplE PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.311e-48 Identity = 86/142 (60.56%), Postives = 113/142 (79.58%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RL+ Y +++VP L E F Y NI QVPK+EK+V+N G+G+A +N K LEAA++DL +I GQ+PV TRA+ SIA FKIR+G P+G+ VTLRG MY F+D+L N+ LPR RDF+GV+PNSFDG GNY++G+KEQ +FPEI YD Sbjct: 3 RLREKYEKEVVPALMERFGYKNIMQVPKVEKVVINIGVGEAKENPKALEAAVDDLTMIAGQKPVITRAKRSIANFKIRKGMPIGVKVTLRGERMYEFMDKLFNIALPRVRDFKGVSPNSFDGRGNYALGIKEQLIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_THEP3 (50S ribosomal protein L5 OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=rplE PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.311e-48 Identity = 86/142 (60.56%), Postives = 113/142 (79.58%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RL+ Y +++VP L E F Y NI QVPK+EK+V+N G+G+A +N K LEAA++DL +I GQ+PV TRA+ SIA FKIR+G P+G+ VTLRG MY F+D+L N+ LPR RDF+GV+PNSFDG GNY++G+KEQ +FPEI YD Sbjct: 3 RLREKYEKEVVPALMERFGYKNIMQVPKVEKVVINIGVGEAKENPKALEAAVDDLTMIAGQKPVITRAKRSIANFKIRKGMPIGVKVTLRGERMYEFMDKLFNIALPRVRDFKGVSPNSFDGRGNYALGIKEQLIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_SYNWW (50S ribosomal protein L5 OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=rplE PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.311e-48 Identity = 90/142 (63.38%), Postives = 113/142 (79.58%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RL TY + IVP + E+F Y NI QVPK+E++VVN G+G+A QN K L+ A+NDL++I+GQ+PV TRAR SIA FK+REG +G VTLRG MY FLDRLINL LPR RDF+GV+P +FDG GNYS+G+KEQ++FPEI YD Sbjct: 3 RLYETYKKDIVPKMMEKFQYDNIMQVPKVERVVVNIGVGEAIQNPKALDGAVNDLSIISGQKPVITRARKSIAGFKLREGMAIGCKVTLRGERMYDFLDRLINLALPRVRDFRGVSPQAFDGRGNYSLGIKEQTIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_THETN (50S ribosomal protein L5 OS=Thermoanaerobacter tengcongensis GN=rplE PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 5.148e-48 Identity = 87/142 (61.27%), Postives = 113/142 (79.58%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RL+ Y +++VP L E F Y NI QVPK+EK+V+N G+G+A +N K LEAAMNDL +I+GQ+PV TRA+ SI+ FKIR+G P+G+ VTLR MY FLD+L N+ LPR RDF+GV+PNSFDG GNY++GV+EQ +FPEI YD Sbjct: 3 RLREKYEKEVVPALMERFGYKNIMQVPKLEKVVINIGVGEAKENPKALEAAMNDLMMISGQKPVITRAKKSISNFKIRKGMPIGVKVTLRRERMYEFLDKLFNIALPRVRDFKGVSPNSFDGRGNYALGVREQLIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_SYNP2 (50S ribosomal protein L5 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplE PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 5.148e-48 Identity = 88/142 (61.97%), Postives = 115/142 (80.99%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLKT Y + IVP L E+F Y+N+H+VPK+ KI VN G+G+A+ NAK +E+++ +L+ ITGQRPV TRA+ +IA FKIREG P+G+ VTLR MYSFLDRLI+L LPR RDF+G++P SFDG GNYS+G++EQ +FPEI YD Sbjct: 4 RLKTLYQDSIVPKLTEQFGYSNVHEVPKLVKISVNRGLGEASSNAKAMESSIKELSTITGQRPVITRAKKAIAGFKIREGMPVGVMVTLRSEKMYSFLDRLISLALPRIRDFRGISPKSFDGRGNYSLGIREQLIFPEIDYD 145 The following BLAST results are available for this feature:
BLAST of CX296315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296315 ID=CX296315; Name=CX296315; organism=Citrus clementina; type=EST; length=619bpback to top |