CX296315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_AGRT5 (50S ribosomal protein L5 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=rplE PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.005e-43 Identity = 82/142 (57.75%), Postives = 107/142 (75.35%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLKT Y+ +I ++E+FSY N+ +PK++KIV+N G+G+A ++K A DLA I GQ+PV T+ARNSIA FK+RE P+G VTLRG MY FLDRLIN+ LPR RDF+G+NP SFDG GN+++G+KE VFPEI YD Sbjct: 8 RLKTEYVSRIRGAMQEKFSYANVMMIPKLDKIVINMGVGEATADSKKPTIAAGDLAAIAGQKPVITKARNSIAGFKVREHMPIGAKVTLRGERMYEFLDRLINIALPRVRDFRGLNPKSFDGRGNFAMGIKEHIVFPEINYD 149
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RK5_PORPU (50S ribosomal protein L5, chloroplastic OS=Porphyra purpurea GN=rpl5 PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.005e-43 Identity = 82/141 (58.16%), Postives = 109/141 (77.30%), Query Frame = 3 Query: 195 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 LK Y + L+EEF Y NIH+VP+ KI +N G+G+A+QNAK LE+++ +L LITGQ+P+ TRA+ SIA FKIRE P+GI V LR + MYSFL++LINL LPR RDF+G++P SFDG GNY++G++EQ +FPEI YD Sbjct: 5 LKEKYKTTVTQALKEEFQYENIHEVPRFTKITINRGLGEASQNAKALESSIQELTLITGQKPIVTRAKKSIAGFKIREEVPIGIVVHLRKDKMYSFLEKLINLTLPRIRDFRGISPKSFDGKGNYNLGLREQLIFPEIDYD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_STRSY (50S ribosomal protein L5 OS=Streptococcus suis (strain 05ZYH33) GN=rplE PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.312e-43 Identity = 81/142 (57.04%), Postives = 108/142 (76.06%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK YL ++VP L E+F+Y+++ VPK++KIV+N G+GDA NAK LE A +LALI+GQ+P+ T+A+ SIA F++REG +G VTLRG MY FLD+L+ + LPR RDF GV SFDG GNY++GVKEQ +FPEI +D Sbjct: 4 RLKEKYLNEVVPALTEQFNYSSVMAVPKVDKIVLNMGVGDAVSNAKNLEKAAQELALISGQKPLITKAKKSIAGFRLREGVAIGAKVTLRGERMYEFLDKLVTVSLPRVRDFHGVPTKSFDGRGNYTLGVKEQLIFPEINFD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_STRSV (50S ribosomal protein L5 OS=Streptococcus sanguinis (strain SK36) GN=rplE PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.312e-43 Identity = 81/142 (57.04%), Postives = 110/142 (77.46%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK YL+++VP L E+F+Y+++ VPK++KIV+N G+GDA NAK LE A +LALI+GQ+P+ T+A+ SIA F++REG +G VTLRG MY FLD+L+++ LPR RDF GV SFDG GNY++GVKEQ +FPEI +D Sbjct: 4 RLKEKYLKEVVPSLTEKFNYSSVMAVPKVDKIVLNMGVGDAVSNAKNLEKAAEELALISGQKPLITKAKKSIAGFRLREGVAIGAKVTLRGERMYEFLDKLVSVSLPRVRDFHGVPTKSFDGRGNYTLGVKEQLIFPEINFD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_STRS2 (50S ribosomal protein L5 OS=Streptococcus suis (strain 98HAH33) GN=rplE PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.312e-43 Identity = 81/142 (57.04%), Postives = 108/142 (76.06%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK YL ++VP L E+F+Y+++ VPK++KIV+N G+GDA NAK LE A +LALI+GQ+P+ T+A+ SIA F++REG +G VTLRG MY FLD+L+ + LPR RDF GV SFDG GNY++GVKEQ +FPEI +D Sbjct: 4 RLKEKYLNEVVPALTEQFNYSSVMAVPKVDKIVLNMGVGDAVSNAKNLEKAAQELALISGQKPLITKAKKSIAGFRLREGVAIGAKVTLRGERMYEFLDKLVTVSLPRVRDFHGVPTKSFDGRGNYTLGVKEQLIFPEINFD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_HERA2 (50S ribosomal protein L5 OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=rplE PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.312e-43 Identity = 81/142 (57.04%), Postives = 107/142 (75.35%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK YL+ + P L ++F + + QVP+I KIV+N G+G+A QN K +EAA+ DL +I GQ+PV TRA+ S+A FK+R+G P+G VTLR + MY F DRL+NL LPR RDFQG++ SFDG GNYSIG++EQ +FPEI YD Sbjct: 3 RLKDVYLKTVAPALFKDFGFKSPMQVPRITKIVINIGLGEALQNPKAVEAAIGDLTMIAGQKPVVTRAKKSLAAFKLRQGMPIGAMVTLRNDRMYDFYDRLVNLALPRIRDFQGLSRKSFDGRGNYSIGIREQIIFPEIEYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_DEIRA (50S ribosomal protein L5 OS=Deinococcus radiodurans GN=rplE PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.312e-43 Identity = 78/142 (54.93%), Postives = 114/142 (80.28%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 +LKT Y +++ P L ++F Y+++ VP+IEKIVVN G+G + +++K ++ A +LALIT Q+P+ T+A+ SI+ FK+R+G P+GI VTLRG MY FL++LIN+GLPR RDF+G+NPN+FDG GNY++G+KEQ +FPEI YD Sbjct: 3 QLKTKYNDQVRPALMQQFGYSSVMAVPRIEKIVVNEGLGSSKEDSKAIDKAAKELALITLQKPIITKAKKSISNFKLRQGMPVGIKVTLRGERMYVFLEKLINIGLPRIRDFRGINPNAFDGRGNYNLGIKEQLIFPEITYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_CLOK5 (50S ribosomal protein L5 OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=rplE PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.312e-43 Identity = 82/142 (57.75%), Postives = 106/142 (74.65%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RL+ Y +++VP L ++F Y NI Q PK+EKIV+N G+G+A N K LE+A+NDL +ITGQ+PV TRA+ SIA FK+RE +G VTLR MY F D+L+N+ LPR RDF GV+ SFDG GNYS+G+KEQ +FPEI YD Sbjct: 4 RLQEKYEKEVVPALMDKFGYKNIMQAPKLEKIVINMGVGEAKDNPKVLESAVNDLTIITGQKPVLTRAKKSIANFKLRENMAIGCKVTLRKQYMYEFADKLMNVALPRVRDFSGVSDKSFDGRGNYSLGIKEQLIFPEIEYD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_CLOK1 (50S ribosomal protein L5 OS=Clostridium kluyveri (strain NBRC 12016) GN=rplE PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.312e-43 Identity = 82/142 (57.75%), Postives = 106/142 (74.65%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RL+ Y +++VP L ++F Y NI Q PK+EKIV+N G+G+A N K LE+A+NDL +ITGQ+PV TRA+ SIA FK+RE +G VTLR MY F D+L+N+ LPR RDF GV+ SFDG GNYS+G+KEQ +FPEI YD Sbjct: 4 RLQEKYEKEVVPALMDKFGYKNIMQAPKLEKIVINMGVGEAKDNPKVLESAVNDLTIITGQKPVLTRAKKSIANFKLRENMAIGCKVTLRKQYMYEFADKLMNVALPRVRDFSGVSDKSFDGRGNYSLGIKEQLIFPEIEYD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_STRS7 (50S ribosomal protein L5 OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=rplE PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.714e-43 Identity = 81/142 (57.04%), Postives = 108/142 (76.06%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK Y +++P L E+F+YT++ VPK+EKIV+N G+GDA NAK LE A +LALI+GQ+P+ T+A+ SIA F++REG +G VTLRG MY FLD+L+++ LPR RDF GV SFDG GNY++GVKEQ +FPEI +D Sbjct: 4 RLKEKYTNEVIPALTEKFNYTSVMAVPKVEKIVLNMGVGDAVSNAKNLEKAAAELALISGQKPLITKAKKSIAGFRLREGVAIGAKVTLRGERMYEFLDKLVSVSLPRVRDFHGVPTKSFDGRGNYTLGVKEQLIFPEINFD 145 The following BLAST results are available for this feature:
BLAST of CX296315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296315 ID=CX296315; Name=CX296315; organism=Citrus clementina; type=EST; length=619bpback to top |