CX296315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RK5_CHAGL (50S ribosomal protein L5, chloroplastic OS=Chaetosphaeridium globosum GN=rpl5 PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 5.148e-48 Identity = 85/142 (59.86%), Postives = 116/142 (81.69%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK+ YL ++P L EE Y N+HQ+P+++KIV+NCGIG+A+QNAK LE + DL++I GQRP+ RA+ +IA+F++R+ P+G++VTLRG+ MY+FLDRLINL LPR RDFQG+N SFDGHGN+ +G+KEQ +FPEI YD Sbjct: 4 RLKSIYLNNVIPKLNEEAKYKNVHQIPRLKKIVINCGIGEASQNAKTLEYTIRDLSIIAGQRPLVKRAKKAIASFQLRKKMPVGVSVTLRGDAMYAFLDRLINLALPRIRDFQGLNRKSFDGHGNFHLGLKEQLMFPEIDYD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_SYNJA (50S ribosomal protein L5 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rplE PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.724e-48 Identity = 88/142 (61.97%), Postives = 117/142 (82.39%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RL+ Y IVP L++E YTNIHQVP++EKIV+N G+GDA+QNAK LE+++ +++ ITGQRPV TRA+ +IA+FKIR+G P+G+ VTLR MY+FLDRLIN+ LPR RDF+GV+P SFDG GNY++G++EQ +FPEI YD Sbjct: 4 RLQILYNTVIVPKLQKELGYTNIHQVPRLEKIVINRGLGDASQNAKALESSIAEISAITGQRPVITRAKKAIASFKIRKGMPVGLMVTLRRERMYAFLDRLINIALPRIRDFRGVSPKSFDGRGNYTLGIREQLIFPEINYD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_ALKOO (50S ribosomal protein L5 OS=Alkaliphilus oremlandii (strain OhILAs) GN=rplE PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.724e-48 Identity = 84/142 (59.15%), Postives = 111/142 (78.17%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK Y ++ P + E+F Y ++ ++PKIEKIVVN G+GD+ N KGLEAA+ +L +ITGQ+PV TRA+ S+A FK+R+G P+G VTLRG MY F DRL+N+ LPR RDF+GVNPN+FDG GNY++G+KEQ +FPEI YD Sbjct: 3 RLKDMYKSEVAPAMMEKFGYKSVMEIPKIEKIVVNMGLGDSKDNPKGLEAAVKELGIITGQKPVVTRAKKSVANFKLRQGMPIGAKVTLRGEKMYEFADRLLNIALPRVRDFRGVNPNAFDGRGNYALGIKEQLIFPEIEYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_TRIEI (50S ribosomal protein L5 OS=Trichodesmium erythraeum (strain IMS101) GN=rplE PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.498e-47 Identity = 86/141 (60.99%), Postives = 113/141 (80.14%), Query Frame = 3 Query: 195 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 LK Y +KIVP L ++F Y NIHQVPK+ K+ +N G+G+A+QNAK L++++ ++A ITGQ+PV TRA+ +IA FKIR+G P+G+ VTLR MY F++RLINL LPR RDF+G+NP SFDG GNYS+GVKEQ +FPEI YD Sbjct: 5 LKKYYYKKIVPKLIDQFKYKNIHQVPKLVKVTINRGLGEASQNAKALDSSIKEIATITGQKPVVTRAKKAIAGFKIRQGMPVGVMVTLRSQRMYEFIERLINLALPRIRDFRGINPKSFDGRGNYSLGVKEQLIFPEIEYD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_CYAP8 (50S ribosomal protein L5 OS=Cyanothece sp. (strain PCC 8801) GN=rplE PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.498e-47 Identity = 88/142 (61.97%), Postives = 115/142 (80.99%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK Y + IVP L E+FSY N H+VPK+ KI VN G+G+A+QNAK LE+++N+L+ ITGQ+PV TRA+ +IA FKIR+G P+G+ VTLR + MY+FLDRLINL LPR RDF+G++ SFDG GNYS+G++EQ +FPEI YD Sbjct: 4 RLKQVYQDTIVPKLTEQFSYKNPHEVPKVVKITVNRGLGEASQNAKALESSINELSTITGQKPVVTRAKKAIAGFKIRQGMPVGVMVTLRSDRMYAFLDRLINLALPRIRDFRGISAKSFDGRGNYSLGIREQLIFPEIDYD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_CHLAD (50S ribosomal protein L5 OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=rplE PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.555e-47 Identity = 89/144 (61.81%), Postives = 116/144 (80.56%), Query Frame = 3 Query: 186 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 T RL+ Y +++VP L EEF + +I QVP++ KIVVN G+G+A QNAK +EAA+ND+A ITGQ+PV TRA+ S+A+FK+R G P+G+ VTLRG+ MY FLDRL +L LPR RDF+GV+ +SFDG GNYSIG+KEQ VFP+I YD Sbjct: 2 TVRLREKYYKEVVPALMEEFKFKSIMQVPRLVKIVVNVGVGEAVQNAKAIEAAVNDVAAITGQKPVVTRAKKSVASFKLRAGMPIGVMVTLRGDRMYDFLDRLCSLALPRIRDFRGVSRSSFDGRGNYSIGLKEQIVFPDIDYD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_SYNJB (50S ribosomal protein L5 OS=Synechococcus sp. GN=rplE PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 5.692e-47 Identity = 86/142 (60.56%), Postives = 117/142 (82.39%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RL+ Y IVP L++E YTNIHQVP++EKIV+N G+G+A+QNAK LE+++ +++ ITGQRPV TRA+ +IA+FKIR+G P+G+ VTLR MY+FLDRLIN+ LPR RDF+GV+P +FDG GNY++G++EQ +FPEI YD Sbjct: 4 RLQILYNTVIVPKLQKELGYTNIHQVPRLEKIVINRGLGEASQNAKALESSIAEISAITGQRPVITRAKKAIASFKIRKGMPVGLMVTLRRERMYAFLDRLINVALPRIRDFRGVSPKAFDGRGNYTLGIREQLIFPEINYD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_DESAP (50S ribosomal protein L5 OS=Desulforudis audaxviator (strain MP104C) GN=rplE PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 5.692e-47 Identity = 82/141 (58.16%), Postives = 114/141 (80.85%), Query Frame = 3 Query: 195 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 LK Y+E+++P + ++F Y N+ +VP++EK+V+N G+G+A QNAK ++AAM DL ITGQ+PV TRA+ S+A FKIREG +G+ VTLRG+ MY F+DRLIN+ LPR RDF+GV+P +FDG GNY++G+KEQ +FPEI YD Sbjct: 4 LKQKYIEEVIPAMMDKFKYRNVMEVPRLEKVVINIGMGEAVQNAKAIDAAMQDLRTITGQQPVVTRAKKSVAAFKIREGMRIGLKVTLRGSRMYDFVDRLINVALPRVRDFRGVSPKAFDGRGNYTLGLKEQLIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RK5_PSEAK (50S ribosomal protein L5, chloroplastic OS=Pseudendoclonium akinetum GN=rpl5 PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 9.709e-47 Identity = 91/144 (63.19%), Postives = 114/144 (79.17%), Query Frame = 3 Query: 186 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 T RLK + EKI P L E+ Y N HQVP IEKIV+N G+G+A+QN K LE+++N+L LI GQR V TR++ +IA FK+RE P+G+AVTLRG+ MY+FLDRLINL LPR RDFQG+NP SFDG GNYS+G++EQ +FPEI YD Sbjct: 2 TERLKVVFQEKIAPKLIEKNRYKNKHQVPVIEKIVINRGLGNASQNTKILESSLNELTLIAGQRGVLTRSKKAIAAFKLREKTPVGVAVTLRGDRMYAFLDRLINLALPRIRDFQGINPKSFDGLGNYSLGLEEQLMFPEIDYD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_ANOFW (50S ribosomal protein L5 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rplE PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.268e-46 Identity = 86/142 (60.56%), Postives = 113/142 (79.58%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK YL+++VP L +F+Y ++ QVPKIEKIV+N G+GDA QNAK L+ A+ +LALI+GQ+PV TRA+ SIA F++REG P+G VTLRG MY F D+L+++ LPR RDF+GV+ SFDG GNY++GVKEQ +FPEI YD Sbjct: 3 RLKEKYLKEVVPALMSKFNYKSVMQVPKIEKIVINMGVGDAVQNAKALDNAVEELALISGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGERMYEFFDKLVSVSLPRVRDFRGVSKKSFDGRGNYTLGVKEQLIFPEIDYD 144 The following BLAST results are available for this feature:
BLAST of CX296315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296315 ID=CX296315; Name=CX296315; organism=Citrus clementina; type=EST; length=619bpback to top |